Lachnoclostridium phytofermentans: Cphy_1352
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Entry
Cphy_1352 CDS
T00619
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy03420
Nucleotide excision repair
cpy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cphy_1352
03430 Mismatch repair
Cphy_1352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_1352
Enzymes [BR:
cpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cphy_1352
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cphy_1352
MMR (mismatch excision repair)
Other MMR factors
Cphy_1352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
ResIII
AAA_11
RecG_N
Motif
Other DBs
NCBI-ProteinID:
ABX41728
UniProt:
A9KP66
LinkDB
All DBs
Position
complement(1686019..1688442)
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AA seq
807 aa
AA seq
DB search
MSIYDSLNPEQRRAVEHDRGPMLILAGAGSGKTRVLTHRIAYLIEERNVNPYQIMALTFT
NKAAKEMRERVDKIVGYGAENIWVSTFHSTCVRILRRFIETLGYDRNFTIYDTDDQKTLI
REVLKFLQIDTKQTKERVFLSAISSAKDEGISPEEFELSALGDYNKMKISNVYKEYQRRL
KTNNALDFDDLIMKTVELFQSNTEALNYYRNRFRYIMVDEYQDTNTIQFKLIRLLAHSLN
EYNEVEHNLCVVGDDDQSIYKFRGANIRNILDFEKEFPDAVVIKLEQNYRSTKNILNAAN
EVIHNNLGRKDKSLWTDNEDGEQVSFCQYDTDFAEATQVVDSIKTLNDQDGISFNNFAIL
YRTNAQSRVFEEKMIQRSVPYKIIGSINFYQRKEIKDLLAYLKTIDNGLDGIAVKRIINV
PKRGIGLTTLDRVEEFSVKNNMSFYDALRHAENIPGLGRSTSKITSFVSFIETIKSKLSS
DTFTLKDLMEEILEGTGYLKELEEADDESAEDRIGNINELINKIVTYEVEATEPPTLSGF
LEEVALVADIDSLEEDSNHVVLMTLHSAKGLEFPYVYLCGMEDGIFPSYMSINAENPELE
IEEERRLCYVGITRAMKQIHLSAARQRMMRGETQFNRPSRFINEIPRYLLTIQSAQNKGY
LAKDSYGESPIRNASPNFSTQSRGMFDSDNPFDKSSSYNDTMFDKATPSMRGTTGINSMP
SFSGQAKTARGFQPSVGGTLPTKNFGNSNLGTLAYGVGDTVKHIKFGQGVVTNLTKGGRD
YEVTVDFGEQGIKKMLSSFAKLEKIED
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagtatatacgattccctaaacccggaacaacgaagagctgtggagcacgatcgtggt
ccaatgttaattttagccggcgctggttctggtaaaacaagagtgttaacccatagaatt
gcctacctgattgaagagagaaatgtaaatccatatcagataatggctctaacctttacg
aacaaagcagccaaagaaatgagagaacgtgtcgataagattgtgggatatggcgctgaa
aatatctgggtcagtactttccactccacctgtgttcgtatcctaagacgttttattgaa
acccttggatatgatcgaaattttacaatctatgatacagacgatcaaaagactttaata
cgtgaagttttaaaattcttacaaattgatacaaagcagaccaaagagagagtctttctt
tctgctatttcaagtgctaaggatgaaggaatctccccagaagagtttgaactatctgca
ttgggtgattataataaaatgaagatttccaatgtttataaggaatatcaaagacgactt
aagacaaacaatgcccttgattttgatgatttaattatgaagacggttgaactctttcaa
tctaatacagaggcattaaattactatcgtaatcgttttcgatacattatggtggatgag
tatcaagataccaataccattcagtttaaattaatacgtttacttgcacatagcttgaat
gaatataatgaagtagaacataacctttgcgtagtaggtgatgacgatcaatccatttat
aaattccgtggtgctaatatccgaaacatccttgattttgaaaaggaatttccagatgca
gtcgtaattaaactggaacaaaattatcgttctacaaaaaatattctaaatgcagccaat
gaagtaattcacaataaccttggccgtaaggataagtctttgtggaccgataatgaagat
ggtgagcaagttagtttttgccagtatgatactgattttgcagaagcaactcaggtagtt
gatagtattaaaacattaaatgatcaagatggtatatcttttaataactttgccatccta
tatagaacaaacgctcagtctcgtgtattcgaagagaaaatgattcaacgaagcgttcct
tataaaatcatcggtagtattaatttctaccaaagaaaagaaatcaaggaccttctagcc
tacttaaaaacgattgataacgggcttgatggtattgcagtaaagcgtattattaatgtt
cctaaacgagggattggtttaactacacttgaccgtgtggaagaattctctgtgaaaaat
aatatgagtttttatgacgctctacgtcatgcagaaaatatccctggattaggccgttcc
acctcaaaaatcacctcatttgtcagttttatagaaactataaaaagtaaactaagctct
gatacctttaccttaaaggatttgatggaagaaattttagagggcactggatacttaaaa
gaattagaagaagctgatgatgagtccgcggaagatcgtatcggaaatatcaatgaacta
attaataaaatcgtaacctatgaagtggaagcaaccgaacctccaaccctcagtggtttc
ctagaagaagtagctttggttgctgatattgactctcttgaggaagatagtaatcatgta
gtattaatgacccttcatagtgcaaaaggacttgagttcccttatgtgtatctttgtggt
atggaggatggtattttccctagttatatgtcaatcaatgcagaaaatccagaacttgaa
atcgaagaagaacgacgtctttgctatgtaggtatcacgagagctatgaagcagatacat
ttaagtgcagctaggcagcgaatgatgcgaggtgaaactcaatttaatcgaccatccaga
tttattaacgagattccccgctatcttctgacgattcagtccgcacagaataaaggatat
cttgcaaaagattcctatggcgaaagtccaatccgtaatgcatcaccaaacttttcaact
cagtcacgtggtatgtttgattcagataatccatttgacaaatcatcaagttacaatgat
accatgtttgataaagctacaccttctatgcgtggtacgactggaattaattccatgcca
tcattttctggtcaagcaaaaacagcgcgtggttttcaaccatccgttggcggtacatta
ccaaccaaaaattttggtaacagtaatcttggcacccttgcctatggcgttggtgatact
gtgaaacatattaaatttggacaaggcgttgttactaatctaacaaaaggcggtagagat
tacgaagttactgttgactttggcgaacaaggtatcaaaaaaatgctatcctctttcgct
aaattggaaaaaattgaagattaa
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