Lachnoclostridium phytofermentans: Cphy_2020
Help
Entry
Cphy_2020 CDS
T00619
Name
(GenBank) ABC transporter related
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Cphy_2020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpy02000
]
Cphy_2020
01504 Antimicrobial resistance genes [BR:
cpy01504
]
Cphy_2020
Transporters [BR:
cpy02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
Cphy_2020
Antimicrobial resistance genes [BR:
cpy01504
]
Gene variants
Macrolide resistance genes
Transporters
Cphy_2020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
NACHT
AAA_29
RNA_helicase
AAA_18
NPHP3_N
AAA_14
KAP_NTPase
AAA_22
AAA_16
nSTAND_NTPase5
AAA_15
NB-ARC
Thymidylate_kin
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
ABX42388
UniProt:
A9KID6
LinkDB
All DBs
Position
2493821..2495389
Genome browser
AA seq
522 aa
AA seq
DB search
MSKIIIQNMYFHYAEYFQTVFEDVNLTLDTDWRLGLIGRNGRGKSTFLKLLHGSLIPDKG
NVVKQVNTEFFPYEINTNYRVTLDVLKECIGNLKTMEDTMEEIIVSEDKNRYQEYQEILE
QYLEFDGFQMESRILREIALMNLPEEILTRNYEVLSGGEKTRLQIIAMFLRNNAYVLLDE
PTNHLDLEGKRLLADYLKQKKGFLVVSHDRSFLDEVIDHVLSFNKSDIEIEKGTFTSWKE
NKDKKESYESRTEAKLVREIKALHNQSVLKRDWASSAEKTKNNHGKFERSSGSRAAQFMM
HAKRAEDRVKKNLEDKNKLLQNFEVAKELEIKQKSLEGYTILRVKDLSFGYDGGILFSNL
NFKVAVGDRIWVRGKNGSGKSTLLKLIAKHLESDCINYFDEIQITESFQEPLWNSGYVTD
YIIEDSKRHQIYELCGLFDIPTETLLRPIETLSGGEKKKLDIARALVCENQLILLDEPLN
FMDIYFREQLEKAILQYQPTIIFIEHDEWFGNRVATKIITLD
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaataataattcaaaatatgtattttcactatgcagaatattttcagactgta
tttgaagatgtaaatttaacgctcgataccgattggaggctaggcctcatagggagaaat
gggagaggaaaatcaacctttttaaaacttttgcatggaagtttaattcctgataaggga
aatgtggtgaaacaggttaatacggagttttttccttatgaaataaatacgaattataga
gtaactcttgatgtgttaaaggagtgcattggaaatttaaagacgatggaagataccatg
gaggaaatcatcgtttctgaggataaaaacaggtatcaggaatatcaagagatacttgaa
cagtatcttgaatttgatggatttcaaatggaaagtcgaattttaagggaaatagctctc
atgaatttaccagaagagatactaactcgtaattatgaagttttatcaggaggagaaaaa
acaagacttcaaatcatagcaatgtttttacggaataacgcttatgtactgctagatgag
ccaacgaatcatctggatttggagggtaaaagattattagcagattatctaaagcagaaa
aaaggatttttggtagtatctcatgatcgaagcttcttagatgaagtgatagaccatgtt
ttatcttttaataaatcggacattgagattgaaaaaggaacctttacttcttggaaggag
aataaggataaaaaagaaagttatgaatcccgtacggaagcaaagttagtaagagaaatc
aaagcattgcataatcagtcagttttgaaacgagattgggctagtagtgctgagaagact
aagaataatcacggaaagtttgaacgttccagcggatcacgagcagcacagtttatgatg
catgcaaaaagagcagaagatagagttaagaaaaacttagaggataaaaataagctgcta
caaaactttgaagtagcaaaagaactagaaattaaacagaagtctttagagggttatacc
atattaagagtaaaagatctttcctttggatatgatggcggtatcttattttcaaatctg
aactttaaagtggcggttggtgaccggatatgggttcgtgggaaaaacggttctggtaaa
agcacattattaaagttgattgcaaaacatttagagtccgattgtatcaattactttgat
gaaatacagattacagaatcttttcaagaaccattatggaattctggatatgtaacagat
tatattattgaggatagtaagcgacatcaaatttacgaattatgtggtctttttgatatt
cctactgaaactttacttcgaccgattgaaactcttagtgggggtgaaaagaaaaaacta
gacattgcaagagctttagtttgtgaaaatcaattaattcttctggatgagccacttaac
tttatggatatttactttcgtgaacagttagaaaaagcgatactacaataccaaccgact
attatatttatagaacatgatgaatggtttggtaatagggtggcaacaaagataataact
ttggattaa
DBGET
integrated database retrieval system
