Lachnoclostridium phytofermentans: Cphy_2455
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Entry
Cphy_2455 CDS
T00619
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpy03009
]
Cphy_2455
Enzymes [BR:
cpy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Cphy_2455
Ribosome biogenesis [BR:
cpy03009
]
Prokaryotic type
ribosomal protein modification factors
Cphy_2455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ABX42816
UniProt:
A9KLS2
LinkDB
All DBs
Position
complement(3012965..3014287)
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AA seq
440 aa
AA seq
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MKIFFISLGCDKNLVDSEVMLGLIRDRGFELTNDESEADIIVVNTCCFIHDAKEESINTI
LEMAEYKKSGSLKGLIVTGCLAQRYKEDILAEIPEVDALLGTTSYDAITEVIDKVLGGER
TESFKDVDYLSEVKTNRVNTTGGYYSFLKIAEGCDKHCTYCIIPKIRGDYRSVPMERLVE
EAKFLSEGGVKELILIAQETTVYGVDLYGKKMLPELLRKLCAIDGIEWIRIQYCYPEEIN
DELIDVLKSETKICHYLDIPIQHASDDILKRMGRRTNNEELVTLITKLRKEIPDIALRTS
LITGFPGETEEDHEILKEFVRKMRFERLGVFTYSKEEDTPAAKMKDQITKKVKVARQKEL
MEIQQGIAFERAESMVGRKLKVMIEGKLVEDGIFIGRTYMDAPNIDGYIFVHTKDELMSG
EFVEVTVTEAKEYDLIGTAE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattttttatctcacttggttgtgacaagaatttagttgacagcgaggtaatg
ctaggattaattagagaccgtggctttgaactaacgaacgatgaaagcgaagcagatatt
attgtagtaaatacatgctgctttatccatgatgcgaaagaagaaagtattaacaccatt
cttgaaatggcagaatataagaaaagtggcagcttaaaaggacttattgtcactggctgt
cttgctcagcgttataaagaggatattttagcagaaattcctgaggttgacgcattgctt
ggaactaccagctatgatgctattactgaggtgattgataaggtattaggaggagaaaga
acagagtctttcaaagatgtcgattacttatcggaggttaagacaaaccgcgttaataca
accggtgggtattattctttcttaaaaattgcagaagggtgcgataagcactgtacgtac
tgtatcattcctaaaattcgtggagattatcgtagtgttccaatggaacgtttggttgaa
gaagcgaagtttctttcggaaggtggagtaaaggaattaatcctaattgcgcaagaaact
accgtatatggtgtagatttatatggaaagaaaatgctccctgaactattacgtaagctt
tgtgcaattgatggtattgaatggataagaattcaatattgttacccagaagagattaat
gacgagttgattgatgtactcaagtcagaaacgaaaatctgtcactatcttgatatccca
attcaacatgcttccgatgatatactaaaacgcatgggacgtagaacaaataatgaggaa
ttagtaacactgattacgaaacttcgtaaagaaataccagatatcgcacttagaacttct
ttgatcacaggtttccctggagaaacggaggaagaccatgagatattaaaagaatttgtt
cgcaagatgagatttgaacgtttaggagtatttacttattcaaaagaagaggatacacca
gcagcgaagatgaaagatcagattacgaaaaaagtaaaagtagcacgtcaaaaagaactg
atggaaattcaacaagggattgcttttgaaagagcggaatcaatggttggacgtaaatta
aaggttatgatcgaaggaaaacttgtagaagatggaattttcattggaagaacctatatg
gacgctccgaatattgatggatatatatttgtacacaccaaggatgaacttatgtccggt
gagtttgtggaggttacggtaactgaagcaaaagaatatgatttaataggaacagccgag
tag
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