Lachnoclostridium phytofermentans: Cphy_2493
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Entry
Cphy_2493 CDS
T00619
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cphy_2493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_2493
Enzymes [BR:
cpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cphy_2493
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cphy_2493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
Zot
SLFN-g3_helicase
TrmB
HTH_11
AAA_19
Zn_Ribbon_YjdM
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABX42854
UniProt:
A9KMA0
LinkDB
All DBs
Position
complement(3059669..3062047)
Genome browser
AA seq
792 aa
AA seq
DB search
MQYADIIVDISVENLDKTYQYSIPPALCADAVIGVPVTIPFGNGNRSISGFIVGLSDVPK
IAPERIKSILGIKDKGLPIEGQMIALAAFVKEQYGGTMNDALKTVIPVKKSVKQIEKRIV
SSAVSKEKLQDAYIEAEKKKHKAKARLLLALMNSEEIEFEDIVNKLNISRTTINSLKESG
IIQIESETKYRNPIASKTTDSYSISLNYEQQEIVSKVLKDYEEGIRKTYLIHGITGSGKT
EVYMGIIDQVIQSGRQVIMLIPEIALTYQTVVRFYKRFGNRISILNSKMSAGERYDQIER
AKNGDIDIMIGPRSALFTPFKDLGLIIIDEEHETSYKSEMPPKYHAREVAIKRGELSNAS
IILGSATPSLEAYKKAMDGEFELFHLTKRAKEAKVPMVSIVDLKEELKKKNKSIFSDLLR
SLIEDRLRKKEQIMLFLNRRGYAGFVSCRSCGTAMKCPHCDISLTAHSTGVLKCHYCGYE
IPTPNICPVCGSKYIAAFGTGTQKVEAMVLKEFPTARVLRMDADTTKNKLSYEEILSSFA
NGEADILIGTQMIVKGHDFAGVTLVGILAADLSLYANDYRAAERTFQLLAQAAGRAGRGE
LIGEVVIQTYQPEHYAVTTAATEDYVAFYEQEMNYRRLMKYPPAAHIMAILIQSKEEEVV
ILAADLLAGAVKEWLKAKVELINQDKPDEQNKFIEQGKFEFKEQDKFKEQGKIENYLENN
EQDDNKPNISIIGPAPAGIAKMNDIYRRVLYLKEEQYEYLVEVKDFLEQYITVSEYFKKC
NVQFDFDPMNSY
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgcagatattatagtggacatatcagtagaaaatctggataaaacctaccaa
tacagcataccgcctgctctttgtgcggatgctgttattggcgtgccagtaactatacca
tttggcaatgggaatcgtagcatcagtgggtttattgttggactatctgatgtacccaag
attgctccagagagaataaaatccatacttggaattaaagataaagggctaccaatcgaa
ggacagatgatagcccttgctgcatttgtgaaagagcaatatggcggtacgatgaatgat
gccttaaagacagtaattccagtgaaaaaaagtgtgaagcagattgaaaaacgaatcgta
tcgtcagctgtgtcaaaagaaaagttacaggacgcatatattgaagcggaaaagaaaaag
cataaagcgaaagcaagactattattggctcttatgaatagcgaagaaattgagtttgag
gatattgtcaataaattaaatatctcaagaacaaccattaattccttaaaggaaagtgga
atcattcaaattgaatcagagacaaagtatcgtaatccaattgcttcaaagacgacggat
agttacagtatctctttaaattatgaacagcaagaaatagtgtctaaggttttaaaggat
tatgaagaagggatacgaaaaacttatttaatccacggtattacaggcagcggtaaaaca
gaagtatatatgggaattatcgaccaagtaatacaatctggtagacaggttattatgtta
attcctgaaattgcgcttacgtatcagactgtagtacgtttttacaaaagatttggtaat
cgtatctctattctaaactctaagatgtctgctggagaacgatacgatcaaattgaacga
gcaaaaaatggcgatatcgatatcatgattggtcctaggtctgctttatttacgccgttt
aaagacctaggtttgattattatagatgaagagcatgaaacaagttataaaagtgagatg
cctccgaaatatcatgcaagagaagtggcgattaagagaggcgaactaagcaatgcttcc
atcatccttggttctgcaaccccatctctggaagcatataaaaaagcaatggacggagaa
tttgagctatttcatttaacgaaaagagcaaaagaagcaaaagttccgatggtttccatt
gttgatttaaaagaagaattaaagaagaaaaacaaatccatctttagtgatctgttacga
agcttaattgaagatcgtttaagaaaaaaagaacagattatgttatttttaaaccgaaga
ggatacgcaggttttgtgtcatgtcgaagttgtggtactgcaatgaaatgtcctcattgc
gatatttccttgacggcacatagtactggtgtgttaaaatgtcattattgcggatatgaa
attccgaccccaaacatttgtccggtctgtggttctaagtatattgctgcttttggaaca
ggaacgcagaaagttgaggcgatggtattaaaggaatttccgacggctagagttctacgt
atggatgcggatactacgaagaacaaactaagttatgaagaaattttaagttcatttgca
aatggtgaagcagatatcctgattggaactcagatgattgtaaaggggcatgattttgcc
ggagtaactctagtgggtattttagctgcggatttatcactttatgcaaatgattatcgg
gcagcagagcgaacatttcagttgttagcacaagcagcaggtcgtgcaggacgtggtgaa
ctgatcggagaggttgtgatacaaacctatcaaccagagcattatgcagtaaccactgcg
gcgacagaagattatgttgctttttatgagcaggagatgaattacaggcgtcttatgaag
tatcctcctgctgcgcacattatggctattttgattcagtcaaaagaggaggaagttgtt
atccttgcagcggatcttttggctggggcagtgaaagaatggttaaaggcgaaggtagaa
ttaattaaccaagataaacctgatgaacaaaataagtttattgaacaaggaaagtttgag
ttcaaggaacaagataagttcaaggaacaaggaaaaattgaaaattatttggaaaacaat
gagcaagatgataataagcctaatattagtattatcgggcctgcgcctgctggaattgca
aaaatgaatgatatttatcgaagagttttatatctaaaagaagaacaatatgagtatctt
gttgaagtaaaggactttttagaacagtacattacagtttcagagtattttaaaaagtgt
aatgtacaatttgattttgatccaatgaacagttattaa
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