| Entry |
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| Name |
(GenBank) DNA polymerase III, alpha subunit
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| KO |
| K03763 | DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] |
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| Organism |
cpy Lachnoclostridium phytofermentans
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cpy00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cphy_2619
03430 Mismatch repair
Cphy_2619
03440 Homologous recombination
Cphy_2619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cpy03032]
Cphy_2619
03400 DNA repair and recombination proteins [BR:cpy03400]
Cphy_2619
Enzymes [BR:cpy01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cphy_2619
DNA replication proteins [BR:cpy03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cphy_2619
DNA repair and recombination proteins [BR:cpy03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cphy_2619
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3202794..3207377)
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| AA seq |
1527 aa
MDVIMLFFEVFDTLNVEKEIYELFSDISVLKALVSKNNGNVHIYIQSTHLISRKQIKMME
FQLQKQLFSSTKSRVKLIETYQLSSQYTPESLWNMHSDNILEELNDSSVMNYNILRMAEI
SFDGYKMIFKLPDTFLNQKKSEEIKVFLEPMFEQRFCIPVDIRFEFYELIEEAKEEEEYP
QARREKAKQNASGSMETSGEVSDEIRAEIPFELSSSNVDGNNLAGKDSIESKSELNVEKK
KEEKKQIKDDKFSQSDKKNSAYDKAKAYKKKLPDDPDIIYGRPFEGDSIPIKDIQEEIGE
VVIRGKILFTEERELRNEKFLISFNVTDFTDTISAKIFVRTEEIEDIRGQIKKGMFIRLK
GMALYDTYSREITINSIIGIKKIPSFIEKRVDRYENKRVELHAHTMMSDMDAVVDPQALV
KTAFEWGHKAVAITDHGVVQAFPEASHAINPKDYKDDEEKMQRAKDFKIIYGMEAYVVDD
MKDIVQGECGQGIEDTCVVFDIETTGFSSVKDKIIEIGAVKIQHGTIVDRFSTFINPEVP
IPYHIQKLTSITDEMVIGSRTIEEILPEFLSFCEGCYLVAHNASFDIGFITKKAEFLNIP
LTVTSVDTVGLARVLLNHLNNFKLDTVAKALSISLENHHRAVDDAGCTAEIYLKFLEMLR
ERGIETLAQINRAEEVTPDVIKKMPTYHAIILCQNDIGRVNLYRMVSYSHINYFQRRPRI
PKSVLMKHREGLLIGSACEAGELYQAILRNSSEGEIVRLANFYDYYEIQPLGNNQFMIES
EKIDISSEEELKEINRKIIALGEEYNKPVVATCDVHFLNPEDEVYRRIIMAAKGFSDADN
QAPLYFRTTEEMLEEFSYLGKEKAEEVVITNTNKVCDMIEKISPVRPDKCAPVIEDSDKT
LRDICYEKAHSMYGPDLPKIVADRLEHELKSIINNGFAVMYIIAQKLVWKSNEDGYLVGS
RGSVGSSFAATMSGITEVNPLPAHYYCPNCHFSDFESEEVKAFGSSSGCDMPDRDCPVCG
QPLAKDGHNIPFETFLGFNGDKEPDIDLNFSGEYQSKAHDYTEVIFGKGQTFRAGTIGTL
ADKTAFGYAKKYYEEKSVHKRVAEINRIVEGCVGVRRTTGQHPGGIIVLPLGEEIYSFTP
VQRPANDMTTKTVTTHFDYHSIDHNLLKLDILGHDDPTMIRMLEDLTGIDAKTIRMDDQK
VISLFKSTESLGIRPEDIGGCDLGSLGLPELGTDFVMQMLRDTKPQSFSDMIRISGLSHG
TDVWLNNTQTLISEGKCTLSTAICTRDDIMTYLISEGVENGLAFKIMESVRKGKGLTPEM
EEAMVANGVPDWYIWSCKRIKYMFPKAHACAYVMMAFRIAYFKVYYPLAYYTAYFSIRAT
AFNYELMCLGRERLDYHMAEYKRRMGSNDPAQKLTKKEEDTLKDMKVVQEMYARGFDFLP
IDVYTAKAHHFQIIDGKLMPALSTIDGLGDKAADQVVEAVKDGKFLSRDDFKTRCKISGT
VVDLMGDLGLLGDLPMTNQISLMDFLM |
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| NT seq |
4584 nt +upstreamnt +downstreamnt
atggatgttattatgttattttttgaagtgtttgatacactgaatgtagaaaaagaaatt
tatgaattattctccgatatcagcgtattaaaggcgttggtatcgaagaataatggcaat
gttcatatctacatacagagtactcatctgattagtaggaaacaaataaaaatgatggaa
tttcagctgcaaaagcagcttttttcatcaaccaaaagtcgagtaaagttgatagaaacc
tatcaactttcttcgcaatataccccggaatcattatggaatatgcacagcgataatatt
ctagaagagctgaatgacagtagtgtcatgaactacaatattcttcgtatggcagagatt
tcttttgatggctataaaatgatatttaagcttccagatactttcttgaatcagaaaaag
tctgaggagattaaagtgtttttagaaccaatgtttgaacaacggttttgtattcctgtc
gatattcgatttgaattttatgaactaatagaggaagcgaaagaggaagaagagtatcca
caggcacgaagagagaaagcaaaacaaaatgccagtgggtctatggaaacaagtggagag
gttagcgatgagattcgtgcagaaattccatttgaactgtcttcttcgaatgtggatggt
aataatcttgcaggaaaagatagcatagaaagtaagtcagaacttaacgttgaaaagaag
aaagaagaaaagaaacaaattaaggacgataaattctcacaatcagacaagaaaaacagt
gcgtatgataaggcgaaagcatacaaaaagaagcttccagatgatccggatattatttat
ggtcgaccatttgaaggagattccataccaattaaggatattcaagaggaaattggtgag
gttgtaattcgtggaaagattctatttacagaagaaagagagttacgaaacgagaagttt
ttaatttcctttaatgtaactgattttacggatacaatttcagcaaaaatatttgttcga
acagaagagattgaggacattcgtggtcagattaaaaaaggtatgtttatccgtttaaag
gggatggccctttatgatacgtatagtcgtgagattacaataaattctattataggaatt
aaaaaaattccaagctttattgaaaaacgagttgaccgctacgaaaacaaacgtgtagaa
ttacatgctcatacgatgatgagtgatatggatgcggtggtagatccgcaagcacttgtt
aaaacagcattcgaatggggacataaagcggttgcgattaccgatcatggtgttgttcag
gcctttccagaagcatctcatgcaattaatccgaaggattataaggatgatgaagaaaag
atgcagcgtgcgaaggacttcaagattatctatggtatggaagcttatgttgttgatgat
atgaaggatatcgtacagggagagtgtggacaaggaattgaagatacttgtgtagttttt
gatatcgagacaactggatttagctctgtaaaagataaaattatagaaattggtgcagta
aaaatacaacatggtaccattgttgaccgtttctctacatttattaatcctgaagtgccg
atcccataccatatacaaaagttaacaagtattacagatgagatggtaattggttctaga
acaattgaagagatactacccgaattcctaagtttttgtgaaggctgttatctggtggcg
cacaatgcttcctttgatattggatttattacaaagaaagcggagtttttaaatatacca
cttaccgtaacttcagtcgacacggtagggttagccagagttcttttgaatcacttaaat
aattttaagttagataccgtagcgaaagctttaagtatctcattggaaaatcaccatcgt
gcggtagatgatgcaggatgtactgcagaaatctatttgaagtttttagagatgcttcgt
gaacgaggtatagaaactttagctcagatcaatagagcggaagaggtcaccccagatgtt
attaagaaaatgccaacttatcatgcaattattctatgtcagaatgatattggtcgagta
aatctataccggatggtaagttattctcacatcaattattttcagcgtcgaccaagaata
ccaaagtcagtacttatgaagcatagagaaggtttattgattggttctgcatgtgaggca
ggtgaactttatcaggcaattcttagaaattcttccgaaggggagatcgtaagactcgcg
aatttctatgattattatgaaatacaaccgctcggcaacaatcagtttatgattgaaagt
gaaaagatagatattagctcagaagaagaattaaaagagatcaaccgtaaaatcatcgcg
ttaggagaggaatataataaaccagtagttgctacttgcgacgtacatttcctaaaccct
gaggatgaggtttatagacgaattattatggctgcgaaagggttttctgatgcagataac
caggcaccgctttattttagaacaacggaagagatgttagaggaatttagctatcttggg
aaagaaaaagcggaagaagttgtaataacgaatacaaataaagtttgtgatatgattgaa
aagatatcgccagtccgcccggataaatgcgctccagtcattgaagattcggataagaca
cttcgtgatatttgttatgagaaagctcattccatgtatggcccagatcttcctaaaatt
gtagcagatcgattggaacatgagttaaagtcgattatcaacaatggtttcgccgtaatg
tatatcattgctcaaaagctggtatggaagtcgaatgaggatggttatctggttggttcc
cgtggttctgtcggttcttcctttgcagctacgatgtcgggtatcacagaggtaaatcca
cttccagcgcattactactgcccgaattgtcatttttctgattttgaatcagaggaagta
aaagcgtttggttccagttcgggttgtgacatgccagatcgtgattgtcctgtttgtggt
cagccattagctaaggatggacataacataccgttcgaaacgttccttgggtttaacgga
gataaggaaccagatatcgatcttaacttctctggagagtatcagagtaaggcacatgat
tataccgaagttatcttcggtaagggacagaccttccgtgccggtaccattggtaccctt
gcagataaaacagcatttggttatgccaagaagtattatgaagagaagagtgtgcataag
agggttgctgagattaaccgtatagttgaaggttgtgttggggtacgaagaacgacagga
cagcatcctggtggtattatcgttttaccattaggagaagaaatttactcatttactccg
gtacagcgtcctgctaatgatatgacaacgaagaccgttacgactcactttgattaccac
tccattgaccataacttacttaaacttgatattcttgggcacgacgatcctaccatgatt
cgtatgcttgaagatttgacaggaattgatgcgaaaacgatccgaatggacgatcagaag
gtcatctctttgtttaaatcaacagaaagcttaggaataagaccagaagatatcggtggc
tgtgaccttggtagcctaggccttccggagcttggtactgacttcgttatgcagatgtta
cgagacacgaagccacagagtttttcggatatgattcgtatatctggtctttcccacggt
actgacgtatggttgaataatacccaaacgttgatttcagaaggaaagtgtaccctttct
acagcaatttgtacccgtgacgatattatgacttatctgattagtgaaggcgttgagaat
ggacttgcttttaagatcatggagagtgttcgtaaaggaaaagggcttactccggagatg
gaggaagcgatggttgcaaatggagtaccagattggtatatctggtcatgtaagcgtatt
aagtacatgttcccaaaggcacatgcctgcgcgtatgtcatgatggcgtttcgtattgct
tactttaaagtgtattatccgcttgcttattatactgcttactttagtatccgtgccaca
gcatttaactatgaattaatgtgtcttggaagggaacgtcttgattatcatatggcggaa
tataaacgtcgtatgggatcaaatgaccccgcacagaagttaacgaagaaagaagaagat
accctaaaggatatgaaagtagttcaggagatgtacgctagaggttttgatttcttacca
attgatgtctatacagcaaaggcacatcattttcagattattgatggtaaattaatgcca
gcattaagtaccatcgatggacttggagataaggctgcggatcaggtagtcgaagctgtc
aaggatggaaaattcctatcaagagatgattttaagacaagatgtaaaatcagtggaaca
gtagttgatctgatgggtgatttagggttattaggtgatttaccaatgacgaatcagatc
tcccttatggattttcttatgtaa |
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