Lachnoclostridium phytofermentans: Cphy_2789
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Entry
Cphy_2789 CDS
T00619
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpy03009
]
Cphy_2789
Enzymes [BR:
cpy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Cphy_2789
Ribosome biogenesis [BR:
cpy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Cphy_2789
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
CandA_N
DUF5376
Clr2
Motif
Other DBs
NCBI-ProteinID:
ABX43149
UniProt:
A9KNX9
LinkDB
All DBs
Position
complement(3394840..3395880)
Genome browser
AA seq
346 aa
AA seq
DB search
MPITNGHLYNIVKDVNKVREITIVQNEAGQRLDKFLAKYLNKAPKSFFYKMLRKKNITLN
GKKAEGAEKLIEGDIVRLFLAEETIESFKESYQLDAKVNQRAVKLDVLYEDSHVVIINKP
IGMLSQRAKESDVSLVELLIAYLLEMGSLTKEELSTFKPSVCNRLDRNTSGIVIAGKSLL
GLQEMSAKLQDRSLHKYYRCIVKGTMTKGARINGYLAKDEKTNKVRITTNDPNDGESSYI
ETEYQPILSKNGYTLLEVLLITGKTHQIRAHLSSIGHPIIGDTKYGDETLNKKMQKQYGL
SHQLLHSYRLEFPNLPKELEKLSNQKIIAPYPKLFKNLEKSLFSDN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcccattactaatggccatctatataatatagtaaaggatgttaataaagtgagagaa
atcaccatagtacaaaatgaggcaggtcaaagactggataagttcttagcaaaatatctt
aataaagcgcctaagagttttttttataaaatgcttcgaaagaaaaatattaccttgaat
ggaaaaaaggcagaaggagcagaaaaacttatagagggggatatcgttcgtcttttccta
gcagaggagacaatagaaagcttcaaagaatcttatcagcttgatgctaaggtgaatcaa
agagctgtaaaactagatgttttatacgaagattctcatgtagttattattaataaaccg
attggtatgttatcacaacgtgcaaaagaatccgatgtatcattggttgagctattaatt
gcttatcttttagagatggggagtttgacaaaagaggagttatcgacatttaaaccatcg
gtatgcaatcgattagaccgaaataccagcgggatagtaattgccggtaaaagcttacta
ggacttcaggagatgtcagcaaagctacaggatcgtagtcttcataaatattatcgctgt
attgtcaaaggaacgatgactaagggtgctcgaatcaatggatatctggctaaagacgag
aagacgaataaagtaaggattactacgaatgatcctaacgatggtgaaagttcctacatt
gagactgaatatcaaccgatattaagtaagaacggatatacactcttagaggtattatta
atcaccggtaagactcatcagattcgtgctcacttaagtagcattgggcatccgattatt
ggtgatacgaaatatggtgatgaaacgctgaataaaaaaatgcaaaaacagtatggctta
agtcatcagttacttcactcttaccgattagagtttcctaatcttcctaaagagctagag
aaattaagtaatcaaaagataatagcaccatatcctaaattattcaaaaacttagagaaa
agtttatttagcgataactag
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