Lachnoclostridium phytofermentans: Cphy_2803
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Entry
Cphy_2803 CDS
T00619
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy03030
DNA replication
cpy03410
Base excision repair
cpy03420
Nucleotide excision repair
cpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cphy_2803
03410 Base excision repair
Cphy_2803
03420 Nucleotide excision repair
Cphy_2803
03440 Homologous recombination
Cphy_2803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpy03032
]
Cphy_2803
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_2803
Enzymes [BR:
cpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cphy_2803
DNA replication proteins [BR:
cpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cphy_2803
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Cphy_2803
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cphy_2803
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABX43163
UniProt:
A9KNZ3
LinkDB
All DBs
Position
complement(3412480..3415464)
Genome browser
AA seq
994 aa
AA seq
DB search
MVINMNDIINNKQDSKEGDYLLVIDGSSLLSTQFFGNLPKEIMFAKTMEEKEKYFPKIMQ
TATGVYTNAVYGFLRVLLKIIKDQKPTYLAVAWDISRNTFRREIYPDYKGNRGETLEPLK
DQFKLCQHVLKEMGIVQFMDERYEADDFSGTLCQKFEEEVPIRVMTKDNDYLQLITERTN
LWLIHSTAKKTDELYEKYGLSKKELNVPDRTFLFTPELVEKEFGIEPSSVPSLKGIGGDS
SDNIKGVPGVGEATAVALIKEYKTVENLYEILNNLDETGKKEINEYWKTLGIKRTPINAL
LKISDTELVGEKAAILSKTLATIKKDIDLKDLGLEQLRIHINTENAQKCFNELEFKTIKM
DNAEVEDSSINNLRFEADKIKITSNLEEVETLFSNLIKLWEKNQKKLKKTKKSRNDKSDS
KITIKEIKKPEYASEDAVGIKLIMENKSLVGISVYYGSEASFIIPCEGFITPDFLTSKLN
GLLEKKITLAIFDIKKYLPYLNANEESPCFDVTIAGYLLEPDASTYEYQTIAEKYLELDL
PSEKEVFSGQTYASLSLLDQDQYKKAACYESYVAHHIYPVLLKLLSERGLLPLFAGIEMP
LVYTLYDMEQRGIRVDTNGLKDYSDQLGVSIVELEKQIFELVGVEFNINSPKQLGEILFQ
RLGLSYGKKTKTGYSTSAEVLEKLSSEHPVIKLILQYRQLTKLKSTYADGLVSYVEGDGR
IHGTFNQTIAATGRLSSTEPNLQNIPIRMELGRKIRKVFIPEDGYLFLDADYSQIELRLL
AHMSNDARLIEAYRQAQDIHRLTASEVFHTPFDEVTSAQRSNAKAVNFGIVYGISSFSLG
QDLDITRKEAEEYINKYFMTYPGVKTYLDGLIEEGKETGVVKTLYGRIRPVPNLTNSNFM
KRSAEERIAMNSPIQGTAADIMKLAMIHVNQVLKERKLKSRLLLQIHDELLVETHESEVE
EVAKIMKEEMQQAASLSVPLEVEVANGNNWYEAK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggttattaatatgaatgatattataaataataaacaagatagtaaagagggcgattac
ttactggttatcgatggttccagtcttctttcaactcagttttttggtaatctaccaaag
gaaataatgtttgcaaagaccatggaggaaaaagaaaagtatttccctaaaattatgcaa
acagccacgggagtatatacaaatgctgtatatggtttcctaagagtattattaaagatt
ataaaggatcaaaagcctacctatttggcagtggcttgggatattagccgtaatacattc
cgaagagagatttatcctgattataaaggaaatcgtggagaaactttagaaccgttaaag
gatcaattcaaactttgccaacatgtcttaaaagaaatgggaattgttcagtttatggat
gaacgttatgaggcggacgattttagcggaaccttatgccaaaagtttgaagaggaagtc
ccaattcgtgtcatgacaaaggataatgattatcttcaattaattacagagcggacaaac
ctttggctaattcacagtactgcaaagaagacagatgaattatatgaaaaatacggttta
agtaagaaagaattgaatgtaccagatcgtacctttttatttacaccagaattagttgag
aaggaatttggcattgagccttcctctgttccatcactaaaggggattgggggggatagc
tccgataacataaagggtgtacctggagtaggagaagcaactgcggttgccttaataaaa
gaatataagacagttgagaatctttatgagatacttaataatttagatgaaacaggtaag
aaagagattaatgagtattggaaaacgcttggaatcaagagaactccaatcaatgcttta
ttaaagattagtgatactgagcttgttggagaaaaggctgctattcttagtaaaacttta
gctaccataaaaaaagacattgatttaaaagatcttggtcttgaacagttaagaattcat
attaacacagaaaatgcacagaagtgttttaatgaattggaatttaaaacaataaagatg
gacaatgcagaggttgaagattcgtctataaataaccttcgctttgaggcagataaaatt
aaaattacttctaacttagaagaggtagaaacattattttctaacttaataaaattgtgg
gaaaagaatcagaagaagttaaagaaaacgaagaaatctaggaacgataaaagtgatagt
aagattacaatcaaagaaatcaagaagccagaatatgcttcggaggatgccgttggaatt
aagctaataatggagaataagtctcttgtaggtatttccgtttattatggatcagaggcg
tcctttatcattccttgcgaagggtttattacaccagattttctaacttctaaactcaat
ggacttcttgaaaaaaagattacacttgcaatctttgatattaaaaaatacttaccatat
ttaaatgcaaatgaggaaagcccttgttttgatgtaacgattgctggttatttattagaa
ccagacgctagcacttatgaatatcaaactattgctgagaagtatttagaacttgatcta
ccaagtgagaaagaagtatttagtggtcaaacctatgcttctttgtctttattagaccaa
gatcagtataaaaaagcagcatgttatgaaagctatgtggctcatcatatatatcctgtc
ttacttaagttattatcagaacgtggtctacttccgttatttgcagggattgaaatgcct
ctcgtttatacattatatgatatggagcaaagaggaattcgtgttgatactaatggacta
aaggattatagtgatcagcttggtgttagtatcgtagaacttgaaaaacaaatctttgaa
ctggtgggcgtagaatttaatattaattcacctaagcagttaggagaaatcttatttcag
cgactaggtttatcatatgggaaaaaaacaaagactggttattctacctccgctgaggtc
ttagaaaagttaagtagtgaacatccagtgataaaattaatcctacagtaccgccaatta
acgaagttaaaatccacgtatgcagatggccttgtatcctatgtggaaggggatggcaga
atccatggaacctttaatcaaaccatagcagcgactggaagacttagtagtacagaacct
aaccttcagaatataccaattcgtatggagctaggtagaaaaattagaaaagtttttatc
ccggaggatggatatctatttctagatgcagactattcccagatagaacttcgtttgctt
gctcatatgtcaaatgatgcacggctgattgaggcatatcgacaagctcaggatattcac
cgtttaacagcttccgaagtatttcacaccccatttgacgaggtgacaagtgcacagcgt
agcaatgcgaaagctgtaaactttggaatcgtatatggtatcagttcttttagtttggga
caagaccttgatattactagaaaagaagcagaggaatatattaataagtacttcatgacc
tacccaggagttaagacatatctcgatggattaattgaggaaggaaaagaaacaggcgtt
gtaaaaaccttatatggaagaattcggccagttcctaaccttacgaattctaactttatg
aagcgttctgcggaagagcgaatcgcaatgaattcgccaattcaaggtactgccgcggat
attatgaaattggctatgatacatgtgaaccaagtattaaaagaacgaaagttaaaatca
agattattacttcaaatccacgatgagttgctggtggaaacacatgaatctgaagtagaa
gaagtagcaaagattatgaaagaagaaatgcaacaagctgcaagtctttccgttccgctc
gaagttgaggttgctaatggtaataactggtacgaggctaaataa
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