Lachnoclostridium phytofermentans: Cphy_2839
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Entry
Cphy_2839 CDS
T00619
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cphy_2839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_2839
Enzymes [BR:
cpy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Cphy_2839
DNA repair and recombination proteins [BR:
cpy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cphy_2839
Prokaryotic type
Cphy_2839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABX43199
UniProt:
A9KP29
LinkDB
All DBs
Position
complement(3470925..3471602)
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AA seq
225 aa
AA seq
DB search
MSMIQNDWLDSIGEEFHKPYYKQLYDFVKEEYSQTTIYPLAENIFNAFHFTPLSKVKVLI
LGQDPYHNVNQAHGLSFSVLPEQKDIPPSLQNIYKELQSDLGCFIPNNGYLKKWADQGVL
LLNTVLTVRAHQANSHQGRGWEQFTNAIIQAVNQQDRPIVYLLWGKPAQSKIPMLTNPKH
LILKAPHPSPLSSYRGFFGSKHFSQTNEFFNANGLEPIDWQIENI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgatacaaaacgattggttagactctattggggaggagtttcataaaccatat
tacaaacaactatacgattttgtgaaagaagagtatagccaaactacaatttatccctta
gcagagaatatttttaatgctttccattttactccattaagtaaggttaaagtactgata
ctgggccaggatccatatcataatgtcaatcaggcccatgggcttagtttttctgtatta
ccggaacaaaaggatattcctccttccttacagaatatttataaagaactacaatcagat
ttaggatgttttataccaaacaatggatatcttaaaaagtgggcagatcaaggtgtttta
ttattaaatacagtattaacagtaagagcacatcaagcaaattctcatcagggaagagga
tgggagcagtttacgaatgctattattcaagccgttaatcaacaagatcgacctattgta
tatcttctgtggggaaaaccagcacaaagtaagataccgatgctaacaaatccgaaacat
ctcattttaaaggcaccacacccaagtccactgtcttcttatcgtggattttttggaagt
aaacactttagtcagacgaatgaattttttaatgcaaatgggttggaaccaatcgattgg
caaatagaaaatatttaa
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