Lachnoclostridium phytofermentans: Cphy_3289
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Entry
Cphy_3289 CDS
T00619
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cpy
Lachnoclostridium phytofermentans
Pathway
cpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cphy_3289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpy03019
]
Cphy_3289
03110 Chaperones and folding catalysts [BR:
cpy03110
]
Cphy_3289
03029 Mitochondrial biogenesis [BR:
cpy03029
]
Cphy_3289
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpy04147
]
Cphy_3289
Enzymes [BR:
cpy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Cphy_3289
Messenger RNA biogenesis [BR:
cpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Cphy_3289
Chaperones and folding catalysts [BR:
cpy03110
]
Heat shock proteins
HSP60 / Chaperonin
Cphy_3289
Mitochondrial biogenesis [BR:
cpy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Cphy_3289
Exosome [BR:
cpy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Cphy_3289
Exosomal proteins of other body fluids (saliva and urine)
Cphy_3289
Exosomal proteins of breast cancer cells
Cphy_3289
Exosomal proteins of colorectal cancer cells
Cphy_3289
Exosomal proteins of bladder cancer cells
Cphy_3289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
Motif
Other DBs
NCBI-ProteinID:
ABX43643
UniProt:
A9KSJ1
LinkDB
All DBs
Position
complement(4005483..4007108)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKYSADARVAMEAGVNKLANTVRVTLGPKGRNVVLDKSFGAPLITNDGVTIAKEIE
LEDSFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMINEGMKNLAAGANPIILRRGMK
KATDCAVEAISSMSSAINGKDQIAKVAAISAGDDSVGEMVADAMDKVSKDGVITIEESKT
MQTELDLVEGMQFDRGYVSAYMATDMDKMEANLDNPYILITDKKISNIQEILPVLEQIVQ
SGSRLLIIAEDIEGEALTTLVINKLRGTFTVVGVKAPGYGDRRKAMLQDIAILTGGTVIS
DELGLDLKEATLDQLGRAKSVKIQKENTIIVDGEGNKAEIEARISQIKAQIAETTSEFDK
EKLQERLAKLAGGVAVIRVGAATETEMKEKKLRMEDALAATRAAVEEGIIAGGGSAYIHA
SKEVAKLAAKLEGDERTGAQIILKALEAPLSCIAQNAGLEGAVIVNKVREKKTGVGFNAL
TEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEAAVASIKEPAPAMPAGGPGGMGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggatattaaatatagtgcagatgccagagtagcgatggaagctggtgtaaac
aagttagcaaatacagtaagagtaactctaggaccaaagggaagaaatgtagttcttgat
aagtccttcggtgcaccattaattacaaatgatggtgttactattgcaaaagaaattgag
ttagaagattcctttgagaatatgggcgctcagcttgtaaaagaagttgctacaaagaca
aatgatgtagcaggtgatggtacaacaacagctactgttcttgctcaagctatgattaac
gaaggtatgaaaaatcttgcagcaggtgctaatccgatcatcttaagaagaggtatgaag
aaagctactgattgcgctgttgaagcaattagcagtatgagctcagcaattaatggtaaa
gatcagattgctaaggttgctgcaatctctgctggcgatgattccgtaggtgagatggtt
gcggatgctatggataaagttagcaaagatggtgttatcaccattgaagagtctaagact
atgcagactgagcttgacttagtagaaggtatgcaatttgaccgtggatatgtttccgca
tatatggcgactgatatggataagatggaagcaaatctagataatccatatattttaatc
acagataagaagatcagcaacattcaggagatccttcctgttcttgagcagattgttcaa
agtggatccagattattaatcatcgctgaagatatcgaaggcgaagctttaacaacatta
gtaatcaataagttaagagggacattcactgttgttggtgttaaggcgccaggttatggt
gatagaagaaaggctatgttacaagatatcgctattttaactggtggtactgttatctct
gatgaacttggccttgacttaaaagaagctacattagatcagcttggtcgtgcaaaatcc
gttaaaattcagaaagaaaacactatcattgttgatggtgaaggaaataaagcagaaatc
gaagctagaatttctcagattaaggctcagattgctgaaacaacatcagaatttgataaa
gaaaaattacaggagagacttgctaaacttgcaggtggtgtagctgtaattcgtgttggt
gctgcaacagagactgagatgaaagagaagaagcttcgtatggaagatgctttagcagct
acaagagcagctgtggaagaaggtattatcgcaggtggcggttctgcttacatccatgca
tctaaggaagttgctaaacttgctgctaaattagaaggtgatgagagaactggtgcacag
attatattaaaagcattagaagctccattatcatgcatcgctcaaaacgctggtttagaa
ggcgctgttattgttaacaaggttagagaaaagaaaacaggtgttggtttcaatgcccta
actgagaagtatgtagatatggtagaagacggaattcttgatccttctaaggttacaaga
agtgctcttcagaatgcaaccagtgttgcttctacattcttaacaacagaagctgcagtt
gcatccattaaagaaccagctccagctatgccagcaggcggccctggcggaatgggtatg
atgtaa
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