Lachnoclostridium phytofermentans: Cphy_3459
Help
Entry
Cphy_3459 CDS
T00619
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpy03400
]
Cphy_3459
DNA repair and recombination proteins [BR:
cpy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cphy_3459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_22
AAA
AAA_16
Rad51
ABC_tran
DUF7125
GvpD_P-loop
AAA_14
RecA
SLFN-g3_helicase
nSTAND3
AAA_24
NACHT
CbiA
AAA_5
ATPase_2
NPHP3_N
DUF4853
ATP-synt_ab
Elong_Iki1
AAA_11
TK
RNA_helicase
zf-RING_10
NTPase_1
DEAD
PAXNEB
MCM
KTI12
RsgA_GTPase
AAA_19
KdpD
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
ABX43810
UniProt:
A9KHW3
LinkDB
All DBs
Position
complement(4257281..4258639)
Genome browser
AA seq
452 aa
AA seq
DB search
MAKKSTVFFCKECGFESTKWVGQCPGCKSWNSFTEEPVVKKTPVNKASSRKTETPKYLSE
VCTEEENRTVTGIGELDRVLGGGIVKGSLVLVGGDPGIGKSTLLLQMCRQLTTAKKKVLY
VSGEESQQQIKMRAERLGTFQGELLLLSETNLDQIEDIVSKDTPEIMIIDSIQTMFKEEI
SASPGSVSQVRESTGALMHLAKGMGISIFIVGHVTKEGVVAGPRVLEHMVDTVLYFEGDN
TAAYRILRAVKNRFGSTNEIGVFEMKNSGLAEVMNPSEYMLQGKPEDEPGSVVAASMEGT
RTMLVEVQALVCQSNLNMPRRTAAGTDYNRVNLLMAVIEKRLGIQLSFCDAYVNVAGGMK
INEPALDLAIVMALISSYKNRALSSKTLVFGEVGLTGEVRAVSMAEQRVNDAKKMGYEIC
ILPQVNQQHLKIQGIRLIGVNNVRELFKLLQD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaagtaccgtattcttttgtaaagagtgtgggtttgaatctacaaaatgg
gtaggacaatgtccaggatgtaaatcatggaacagctttacggaagaacctgttgtcaaa
aagacaccggtgaataaagctagtagcagaaaaacagaaacaccaaaatacctctctgag
gtatgtacggaagaagaaaatcgaaccgtaacaggaattggcgaattagaccgtgttctt
ggtggcggtatcgtaaaaggatctttagttttagtcggtggagatccgggtattggaaaa
tccacacttcttcttcagatgtgcagacaattgactacggctaaaaagaaggtactatat
gtttccggagaggaatctcaacaacaaattaaaatgagagcagagcgccttggaaccttc
caaggcgaactgctattactttctgaaacaaaccttgatcagattgaggatattgtatca
aaagatactcctgagataatgataattgactcgatccaaacaatgtttaaagaagaaatc
agtgcatccccaggaagtgtaagccaagtacgagaatccacaggagccttaatgcattta
gcaaaaggtatggggatatcgatatttattgttgggcatgtgacgaaggaaggcgttgtt
gctggaccacgagtcttagagcatatggtagatacggtactatattttgaaggggataat
actgctgcttatcgaatccttagagcggtgaaaaaccgttttggttccacgaatgaaatc
ggtgtgtttgaaatgaaaaattcaggattggcagaagtaatgaatccttccgagtatatg
cttcaaggaaaaccagaggatgaaccagggtctgttgtggcagcttctatggaagggaca
agaaccatgttagttgaagtacaagctttggtttgtcaatccaacttaaatatgccccgt
agaacagcagcaggaaccgattataatcgtgtgaatttattgatggcggttattgaaaaa
cgattagggatacagttatctttttgtgatgcttatgtaaatgttgcaggtggaatgaaa
ataaatgagcctgccctagatttagctatcgtgatggcgctaatatccagctacaagaat
agagcactaagtagtaaaacacttgtgtttggagaagtaggtcttacgggagaagtacgt
gctgtaagtatggcggaacagcgtgttaacgatgcaaagaagatgggctatgaaatttgt
attttaccacaggtgaatcagcagcatttaaagatacagggaatccgtcttattggtgtt
aataacgtcagagaattatttaaattattacaggattaa
DBGET
integrated database retrieval system
