Lachnoclostridium phytofermentans: Cphy_3634
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Entry
Cphy_3634 CDS
T00619
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cpy
Lachnoclostridium phytofermentans
Brite
KEGG Orthology (KO) [BR:
cpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpy03016
]
Cphy_3634
Enzymes [BR:
cpy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Cphy_3634
Transfer RNA biogenesis [BR:
cpy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cphy_3634
Prokaryotic type
Cphy_3634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ABX43981
UniProt:
A9KJG1
LinkDB
All DBs
Position
complement(4485291..4486028)
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AA seq
245 aa
AA seq
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MKRVLLKVAYDGTNYCGWQVQPNAKTIEGVLNECLTKLLKEEIVIIGASRTDAGVHAYGN
VAVFDTNSRIPAEKLSYALNAHLPEDIVIQASMEVESDFHPRYCDTRKTYEYRIYNATFP
LPTNRRYAHFVYYDLDLEAMRKAASYLIGEHDFVSFCSANTQVKDTTRTIYDIQIEKERE
LIVIRIKGNGFLYNMVRIIAGTLIQVGTHQWEPERVLEALTKKDRQAAGPTAPAKGLTLV
EIEYL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagagtattattaaaagtagcttacgatggaacgaattattgtggttggcaggta
cagccaaatgcgaaaaccattgaaggcgtattgaatgaatgtttaactaagttattaaag
gaagagattgtgatcataggtgcaagcagaacagatgctggtgttcatgcttatggcaat
gtcgcagtatttgataccaattcgagaattccagcagagaaactatcctatgcgttaaat
gctcatttaccagaagatattgtgattcaagcttctatggaggttgaatccgattttcat
ccaaggtattgcgatactagaaaaacttatgaatatcggatttataatgcaacatttcct
cttccgacaaatcgaaggtatgcccattttgtatattacgatttggatttagaggcaatg
agaaaggcagcttcttatttgattggggagcatgactttgtgagcttttgttctgcgaat
acacaggttaaggatactactaggacaatttatgatattcagatagaaaaagagagagaa
cttattgtaattcgtattaagggaaatggatttctttataatatggtacgaatcattgcg
ggtacgcttattcaggtgggtactcaccaatgggaaccagaacgagtattagaagctctt
acaaaaaaagatcgacaggcagctggaccgactgctccagcaaaagggttaacgctggta
gaaatagaatacttataa
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