Corynebacterium pyruviciproducens: CYJ47_03195
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Entry
CYJ47_03195 CDS
T09618
Name
(GenBank) translation initiation factor IF-2 N-terminal domain-containing protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cpyr
Corynebacterium pyruviciproducens
Pathway
cpyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYJ47_03195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpyr03019
]
CYJ47_03195
03009 Ribosome biogenesis [BR:
cpyr03009
]
CYJ47_03195
Enzymes [BR:
cpyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CYJ47_03195
Messenger RNA biogenesis [BR:
cpyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CYJ47_03195
Ribosome biogenesis [BR:
cpyr03009
]
Prokaryotic type
rRNA processing factors
CYJ47_03195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
Motif
Other DBs
NCBI-ProteinID:
WOT03449
UniProt:
A0AAF0YU60
LinkDB
All DBs
Position
647063..649873
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AA seq
936 aa
AA seq
DB search
MNPDDLGEKVRVYDLARMLNTDSKTVLAGLDEIGVTGKKAQSSIRKAEAEQLLSHLFPQE
KSAKLKKSTKKSTKKTAKQTKKAAKKATKPEKAKKKGATDEEKLRYRVTKNVENEIHQIE
DKVEKQLEERLESAPDSDGTDEPVEEVVITPAPEQPEENPALTPTFVAPTFIAPQLIIEE
PDAEDNGADEPEEEEAPRPEQSTRKRRRGRRGTGRGRKEEPVREEPVEQITEPKAIKGST
RLEAQRRRRHERRAEDRNNRHIVTEAEFLARRESVERTMVVRERERTDHGGLITQIGVLE
DDMLVEHFVTSNTAASQVGNIYLGRVQNVLDSMEAAFIDIGTGRNGVLYSADIDWRQMGL
GGRKRRIDQALKSGDQVLVQVSKDIVGHKGARLTMQISLAGRYLVYVPRGHNAGISRKLP
EPERKRLKSILNDVIPNEGGAIVRTAAEGVSEKEIAADVERLHTLWEDIARRTEEEKASK
GAKPVTMYEEPDVLIRVVRDLFNEDFSTLVVEGDRAYSTVSDYVDKVAPDLADRVVKYNA
EDNDGEDVFAHYRIDEQLQKALGRKVWLPSGGTLIIDRTEAMTVIDVNTGKFTGSGGNLE
ETVTKNNLEAAEEIVRQMRLRDLGGMIVVDFIDMVLPENRDLVLRRLKEALGRDRTRHQV
SEVTSLGLVQMTRKKLGTGLLETFATTCEACEGRGIILHEDPVEQPEKRPVYGRNKKRRS
KPEHDPRQHPAALAMHHDEEADHAEDSHEVEEQHDDHEVHEDRSHGRRRRRSSKRNGDDK
PLRKDRAQENVDKPAEEPEDDRKPAEDTLTYEEAKKRFDESPRRRRRTRGNSVSDHEPKP
EDFDKPARDAHDARDVNDAPEPEQPTQQPEPKEAPKKSTGRRRRAVRRATTKTAAEPKKR
RRKPAAKSPEAKAEEAKPAPQKKSRRRRVARRQAKS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccagatgatctgggggagaaggttcgagtttacgatctggctcggatgcttaac
accgattccaagactgtcctggcaggactcgacgaaatcggtgtgactggtaagaaggcc
cagagctcgatccgcaaggccgaggccgagcagcttctttcgcacctgttcccccaggag
aagtccgccaaactaaagaagtcgactaagaaatcgaccaagaagacggcgaagcaaacc
aagaaggctgcaaagaaggccaccaagccggagaaggcgaagaagaagggcgcgaccgac
gaggagaagcttcgctaccgggtgaccaagaacgtcgaaaacgaaatccaccagattgaa
gacaaggtggaaaagcagctggaggagcggctcgaaagcgccccggattctgacggaacc
gacgagcccgttgaagaggttgtcatcaccccggccccggagcagcccgaggagaacccc
gcgctgacaccgacgtttgtcgcccccacattcatcgccccccagctcatcatcgaggag
ccagacgccgaggacaacggtgccgacgagcccgaggaagaagaggctccccgccccgag
cagtccacccgcaaacgtcgccgcgggcgccgtggcacaggtcgcggccgcaaggaagaa
ccggtgcgcgaggaacccgtcgagcagatcaccgagccgaaggccatcaaggggtcgacc
cgcctcgaagcgcagcgtcgccgccgtcacgagcgtcgcgcggaggatcgcaacaacagg
cacatcgtcaccgaggcggagttcttggcgcgccgggaatcggtggagcgcaccatggtc
gtccgcgagcgtgagcgcacggaccacggcggcctgatcacccagatcggcgtgctcgag
gacgacatgctggtggagcactttgtcacgtcgaataccgcggcctcacaggtggggaac
atttacctgggccgtgtccaaaacgtgctggattccatggaggctgcgttcatcgatatc
ggaaccggccgcaatggcgttttgtactccgccgatattgattggcggcagatggggctc
ggcggccggaagcgccgcatcgatcaggcgttgaagtccggcgaccaggttctcgtccag
gtgtccaaggacatcgtgggccacaagggtgcccgcctcaccatgcagatttcgctggcc
ggccgctacctggtgtacgtgccgcgtggccacaacgccggtatctcgcgcaagctgccg
gagccggagcgcaagcgcctcaagtccatcctcaacgatgtcatccccaacgagggtggt
gccatcgtgcgcaccgccgccgagggcgtgtccgagaaggagatcgccgccgacgttgag
cgcctgcacacgctgtgggaggacatcgcgcgccgcacggaggaggaaaaggcctccaag
ggcgcaaagcctgtcaccatgtacgaggagccggacgttctcatccgggttgtccgcgac
ctgttcaacgaggatttctccacgctcgttgtggaaggcgatcgtgcgtactccacagtg
tccgattacgtggataaggtcgcccccgaccttgccgaccgcgtggtcaagtacaacgcc
gaggataacgatggcgaggacgtgttcgcccactaccgaatcgacgagcagctgcagaag
gcgctcggccggaaggtgtggctgccctcgggcggcacccttatcatcgaccgcacggag
gcgatgaccgtcatcgacgtgaacaccggcaagttcaccggttctggcggcaaccttgag
gagaccgtgaccaagaacaacttggaggcggccgaggagatcgtgcgccagatgcgcctg
cgcgatctgggcggcatgatcgtggtggacttcatcgacatggtgttgcccgaaaaccgc
gaccttgtcctgcgtcgcctgaaggaggcgctgggtcgcgaccgcactcgccaccaggtg
tccgaggtgacctcgctgggcctcgtccagatgacgcgcaagaagctcggcaccggcctg
ttggagacgttcgccaccacgtgcgaggcgtgcgagggtcgcgggatcatcctccacgag
gatcccgtggaacagccggagaagcgcccggtgtacggccgcaacaagaagcgccgttcc
aagccggagcacgacccgcgccagcacccggccgcactcgccatgcaccatgacgaggaa
gccgaccacgccgaggactcccacgaggtagaagagcagcacgacgatcacgaggttcac
gaggatcgctcgcatggtcgtcgccgtcgccgtagctccaagcggaatggcgatgacaag
ccgttgcggaaggaccgcgctcaggaaaacgtcgacaagcccgcagaggaaccagaggac
gaccgcaagcctgcggaggacaccctcacctacgaggaggcgaagaagcggttcgacgag
tcgccgcgccgtcgccgtcgcacgcgtggcaactccgtgagtgaccacgagccgaagccg
gaggactttgacaagcccgctcgcgacgctcacgatgcccgcgacgtgaacgatgccccg
gagccggaacaaccgacgcagcagcccgagccgaaggaagcgccgaagaagtcgactggc
aggcgccgtcgcgcggtgcgccgggccaccaccaagacggcggcggagccgaagaagcgg
aggcggaagcccgcggcaaagtcgccggaggcgaaggctgaggaagcaaagccggcaccg
cagaaaaagtcgaggcgtcgccgcgtggcgcgtcgacaagcgaaatcctaa
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