Corynebacterium pyruviciproducens: CYJ47_07845
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Entry
CYJ47_07845 CDS
T09618
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cpyr
Corynebacterium pyruviciproducens
Pathway
cpyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYJ47_07845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpyr03019
]
CYJ47_07845
03009 Ribosome biogenesis [BR:
cpyr03009
]
CYJ47_07845
Enzymes [BR:
cpyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CYJ47_07845
Messenger RNA biogenesis [BR:
cpyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CYJ47_07845
Ribosome biogenesis [BR:
cpyr03009
]
Prokaryotic type
rRNA helicases
CYJ47_07845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WOT01201
UniProt:
A0AAF0YTT1
LinkDB
All DBs
Position
complement(1714509..1716683)
Genome browser
AA seq
724 aa
AA seq
DB search
MSNPENASGGVNEPDNVISSDTQETSHGVVDDTALTTSSDFTESEAISTDTSDAFGDTAD
NGEERQTTEQIDDESVDTDSAAPSESDDEDARAAETSEGTDSNDLSFDKLGLPSDILEAV
KKVGFETPSPIQARTIPALMEGRDVVGLAQTGTGKTAAFALPILARIDKSNRTPQALVLA
PTRELALQVADAFQEFADHVGGINVLPIYGGQAYGIQLSGLRRGAHIIVGTPGRVIDHLE
KGSLDISHLDYLVLDEADEMLNMGFQEDVERILEDTPDKKQVALFSATMPKAILRLSQQY
LDDPYEVTVKAETRTNTNITQKYLHVAHRNKLDALTRILEVTEFEAMIIFVRTKYETEEL
AEKLRARGFSAQAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVERISHVLNYD
IPHDTESYIHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATLEEIQLPTVDEVNE
SRKEKFADSITEALEDTQLALFRSLVKQYSDAHDVPLEDIAAALAAQAQSNEEFLMKEPP
KEKRRERRDRDGGRRERDHGPSRPDSDFEIYRLQVGRRDHVRPGAIVGAIANEGGLSNRD
FGRIDIQQNFSLVELPKGLGDDVLDRLADTEIGGRNIEIRRDPDGYISRGGRGRDDRGSR
GGRGGFGGRGRGRDRDDRGGRGGYGRGRDRNDRGDRGGYGGRGRGRDRDNRGGRGGYGRG
RDRY
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcccgaaaacgcctccggcggcgtaaacgagccggacaacgtaatttcgtcg
gacactcaggaaacttcgcatggcgtcgtagacgacaccgcactcaccacatccagtgat
ttcaccgaatctgaagcaatctccacagatacttctgatgcttttggtgacaccgctgat
aacggtgaggagcggcagacgacggagcagatcgatgatgagtcagtggacactgactct
gctgctccctccgagtctgacgatgaggacgccagggctgcggaaacttctgagggcacc
gactccaacgacctatcctttgacaagctaggtttgccttcagacatcctcgaagccgta
aagaaggttggcttcgaaactccgtcccccatccaggcgcgcactatccccgcgctcatg
gaagggcgcgacgtggtgggcctggcgcaaaccggtaccggcaagacggcggcctttgcg
ctgccgatcctcgcacgcatcgataaatccaaccgcacgcctcaggcgctcgtgttggcg
cctacccgcgagctggcactccaggttgctgacgcattccaggagttcgccgaccacgtg
ggtggcatcaatgtgctacccatctacggtggtcaggcctacggcattcagctgtccggc
ctgcgccgtggcgcacacatcatcgtgggcactccgggtcgtgtgatcgaccacctggag
aagggctcgctggacatttctcacctcgattacctcgtgttggacgaggcggatgagatg
ctcaacatgggcttccaggaggatgtcgagcgcatcctcgaggacaccccggataagaag
caggtggcactgttctctgccaccatgcccaaggcgatcctccgcctgtctcagcagtac
ttggacgatccctacgaggtgaccgtcaaggctgagacgcgcacgaataccaacatcacg
cagaagtacctccacgttgctcaccgcaacaagcttgacgcgctgacccgtattttggag
gtcaccgagtttgaggcgatgatcatcttcgtccgtaccaagtatgagacggaggagctg
gccgagaagctgcgcgcgcgtgggttctccgcccaggccatcaacggcgatatcgcccaa
cagcagcgcgagcgcaccgtggatcagctccgcgacggccgcttggacatcctggtggcc
acggacgtggccgcgcgcgggctcgacgtggagcgcatctctcacgtgctcaactacgac
atcccgcacgatacggagagctacatccaccgcatcggccgtaccggccgtgccggcagg
acgggcgaggccatcctctttgtcacgcctcgtgagcgtcggatgctgcgctccatcgag
cgcgtcaccaacgccacgctggaagagatccagctgcccacggtggatgaggtgaacgag
tcccgcaaggaaaagttcgctgactccattaccgaggcgttggaagacacccagctggcg
ctgttccgcagcctggtcaagcagtattccgacgcgcacgacgtgccgctggaggatatc
gctgcagccctggccgcgcaggcgcagtccaatgaggagttccttatgaaggagcccccg
aaggagaagcgccgtgagcgccgtgaccgcgacggcggtcgccgcgaacgtgatcatggc
ccgagccgcccggacagcgattttgagatttaccgcctccaggttgggcgccgcgatcac
gtgcgccccggtgcgattgttggcgcgatcgccaacgagggtggtttgtccaaccgtgat
ttcggccgcatcgatatccagcagaatttctccctggtggagcttcccaaggggctcggc
gacgatgtcctcgatcggctcgcggacacggagatcggtggtcgcaacattgagatccgt
cgcgatcccgacggctacatttcccgcggtggtcgcgggcgcgatgatcgcggtagccgg
ggcggtcgcggtggctttggtggccgcggtcgcgggcgtgaccgtgacgatcgtggtggt
cgcggtggttatggccgtggccgtgaccggaacgatcgtggtgatcgtggtggctatggt
ggtcgcggtcgcgggcgcgatcgtgataaccgtggtggtcgcggtggctacggccgtggc
cgtgaccgctactag
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