Corynebacterium pyruviciproducens: CYJ47_10410
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Entry
CYJ47_10410 CDS
T09618
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpyr
Corynebacterium pyruviciproducens
Pathway
cpyr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpyr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYJ47_10410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpyr03021
]
CYJ47_10410
03400 DNA repair and recombination proteins [BR:
cpyr03400
]
CYJ47_10410
Enzymes [BR:
cpyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYJ47_10410
Transcription machinery [BR:
cpyr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CYJ47_10410
DNA repair and recombination proteins [BR:
cpyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CYJ47_10410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
YlqD
Motif
Other DBs
NCBI-ProteinID:
WOT01674
UniProt:
A0AAF0YTL2
LinkDB
All DBs
Position
complement(2278794..2282807)
Genome browser
AA seq
1337 aa
AA seq
DB search
MLDVNYFDELRIGLASADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
QCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERVIYFAANIITTVDEEARHDDLTTLEADMLLEKKDVEADAEEEIQERSKKLEED
LAELEANGAKADARKKVQSAANREITHIRQAAEREVERLDEIWNTFVKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLVRNFDLDAEAENLRTIIKEGKGQKKMRALKRLKVVA
AFQRSGNDPASMILDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRHGRAVTGPGNRALKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKSLVEKEYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTMNKREDEIGGQ
GRYKPATTDHPAEGEYSSVAEAIMAYDREQIGLQAPIRVRISHLRPPADIEAEYFPDGWQ
RGDTWSAMTTLGRIYFNELLPWNYPYLEGVMVRKGGGEGKILLGDVINDLAAKYPMITIA
QTVDKMKDAGFYWATRSGVTITMSDVLVLPNKKEILEDYEKAAAEVENKYWVKGALTQRE
RYDRLVELWKDATDVVGKAVENLYPDDNPIPMIVKSGAAGNMRQLWTLAGMKGMVVNSRG
EYITRPIKTSFREGLNVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTHMGIRVAVCHAQRDSEGTVVGYERDGLIETSVSGRVLAQDATDSEGNVVLEAGADM
TDANIDLLVEKGIEEIKVRSVLTCQTPSGVCAKCYGKSMASGHLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNKTPIAEVSGIVHLEDDGSNFYT
LTIEPDDGSEEKVYEKLSKRQGLAQITVPLPGIPGATTDRAIADGDHVEMGDRLLRGPAD
PHDVLAVLGRRGVEKHLIDEVQAVYRTQGVAIHDKHIEIIIRQMLRRATVIDPGTTDYLP
GTLVDISEAKIVNTEVRKEGGTPADLRVEIMGITKASLATESWLSAASFQETTRVLTDAA
INKRSDKLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNATYSIPTFSESIYSGED
AYGEYTGASVPLDDTAF
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaactactttgacgaactccgcatcggcctcgcctctgccgacgacatc
cgtcgttggtccaagggcgaggtgaagaagccggagaccattaactaccgcaccctgaag
ccagagaaagacggcctgttctgcgagcgtatcttcggacctacccgcgactgggagtgc
cagtgcggtaagtacaagcgcgtccgttacaagggcatcatctgtgagcgctgcggcgtt
gaggtgaccaagtccaaggtgcgccgtgagcggatgggccacattgagctcgccgccccg
gtgacccacatttggtacttcaagggcgtgccctcccgcctgggctaccttctggatctc
gctccgaaggacctggagcgcgttatttacttcgcggccaacatcatcaccaccgttgat
gaggaggcccgccacgatgacctcaccaccctcgaggccgacatgcttctggagaagaag
gatgtggaggccgacgccgaggaggagatccaggagcgttccaagaagctcgaggaggat
ctcgctgagctcgaggccaacggtgcgaaggctgatgcccgtaagaaggtgcagtccgcc
gcgaaccgcgaaatcacccacatccgtcaggccgctgagcgtgaagttgagcgcctcgac
gagatttggaacacctttgtcaagctcgcccccaagcagatgatcatcgacgagaccatc
tacgaagagcttgttgatcgctacgaggattacttcaccggcggcatgggtgccgaggct
atccagaccctcgtgcgtaactttgaccttgatgccgaggcggagaacctccgcaccatc
atcaaggagggcaagggccagaagaagatgcgcgccctcaagcgcctcaaggtcgtcgcc
gcgttccagcgctccggcaatgacccggcttccatgatccttgattgcatcccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgtttcgccacctcggacctc
aacgatctgtaccgtcgcgtgatcaaccgcaacaatcgcctgaagcgcatgatcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggagtccgtcgacgcg
ctgtttgacaacggccgccacggccgtgccgtcaccggcccgggcaaccgcgccctcaaa
tccctcagcgatctgctcaagggcaagcagggccgtttccgccagaacctgctgggtaag
cgtgttgattactccggtcgttccgtgattattgttggcccgcagctcaagcttcacgag
tgtggcctgcccaagctcatggcgttggagctgttcaagcccttcgttatgaagtccctg
gtggagaaggaatacgcgcagaacatcaagagcgccaagcgcatggtggagcgccagcgt
cccgaggtgtgggacgtgctggaagaggccatttccgagcatcccgtgatgctcaaccgt
gcgcctacgctgcaccgcctgggcattcaggcgttcgagccgaagctcgtggagggcaag
gccatccagctgcacccgctcgcctgtgaggcgttcaacgctgacttcgatggtgaccag
atggctgtccacctgccgctgtccgcagaggctcaggccgaagcccgcatcctcatgcta
gcctccaacaacatcctctccccggcatccggcaagccgctggccatgccgcgtctggac
atggtgaccggcctgtacttcctcaccatgaacaagcgcgaggacgagatcggtggccag
ggccgttacaagcccgccaccacggatcaccccgccgagggcgagtactcctccgtggct
gaggccatcatggcttacgaccgtgagcagatcggcctgcaggcccctatccgggtgcgc
atttcgcacctgcgcccgccggccgatatcgaggcggagtacttccccgatggctggcag
cgcggcgatacctggtcggcgatgaccacgctcggccgtatctacttcaacgagctcctg
ccgtggaactacccgtaccttgagggcgtcatggtccgcaagggcggtggcgaaggcaag
atcctgctcggtgacgtgattaatgacctggcagccaagtacccgatgatcaccatcgct
cagacggtggacaagatgaaggatgctggcttctactgggcaacccgctccggcgtgacc
atcaccatgagcgacgttctcgtgcttccgaacaagaaggaaatcctcgaggattacgag
aaggccgctgctgaggtggagaacaagtactgggttaagggtgccctaacccagcgcgaa
cggtacgatcgcctggtcgagctgtggaaggacgctaccgacgtcgtcggcaaggccgtg
gagaacctgtacccggacgataacccgatcccgatgatcgtgaagtccggtgctgccggt
aacatgcgtcagctgtggaccctggccggcatgaagggcatggtggtgaactcacgcggt
gagtacatcacccgcccgattaagacgtcgttccgtgaaggcctcaacgtgctggagtac
ttcaacaactcccacggttcccgtaagggcctggccgatacggctctgcgtaccgccgac
tccggttacctcacgcgtcgtctcgtcgacgtcgcgcaggacgtcatcgtccgcgaggaa
gactgcggtacccacatgggtatccgcgtcgcggtttgccatgcccagcgcgattccgag
ggcaccgtcgttggctacgagcgtgatggtctcatcgagacttccgtctccggccgcgtt
ctcgcccaggatgccacggactccgagggcaacgttgtcctcgaggccggtgccgacatg
accgatgccaacatcgatctcctggtggagaagggcatcgaagagatcaaggtgcgttcc
gttctcacatgccagaccccgtccggcgtgtgcgcgaagtgctacggcaagtccatggcc
tccggccacctcgtcgatatcggcgaagcagtgggcatcgtggccgcacagtccattggt
gagcccggtacgcagctgacaatgcgtacgttccaccagggcggtgtcggtggcgacatt
accggcggtctgcctcgtgtgcaggagctgttcgaggctcgcgtgcccaagaacaagacc
ccgatcgccgaggtgtccggtattgttcacctcgaagacgatggttcgaacttctacacc
ctcaccattgagcctgacgacggctccgaggagaaggtatacgagaagctctccaagcgt
caggggctcgcacagatcaccgtcccgctgccgggtatccccggggctaccacggaccgt
gcaattgccgacggcgaccacgtagagatgggtgaccgtctcctgcgcggcccggccgat
cctcacgacgtgttggccgttctcggccgccgtggcgtggagaagcacctcattgatgag
gttcaggctgtgtaccggacgcagggtgtggcgatccacgataagcacatcgagatcatc
atccgccagatgctgcgtcgcgccacggtcatcgatccgggcacgacggactacctgcct
ggcacgttggtggatatctccgaggcgaagatcgtcaacaccgaggtgcgcaaggagggt
ggcacgcccgccgatctccgcgtggagatcatgggcatcaccaaggcctccctggccacc
gagtcctggctgtccgccgcctccttccaggagacgactcgtgtgctcacggatgctgcc
atcaacaagcgctccgataagctcatcggcctgaaggaaaacgtgatcatcggtaagctg
atcccggctggtactggtatttcccgttaccgcaacatctccgtcaaaccgacggaggcg
gcgcgcaacgcgacgtactcgattccgacgttctccgagtccatctacagtggcgaggat
gcgtacggcgagtacacgggtgcttccgtgccgttggatgacacggccttctaa
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