Corynebacterium pseudotuberculosis PAT10: CpPAT10_0004
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Entry
CpPAT10_0004 CDS
T01879
Symbol
recF
Name
(GenBank) Recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
cpz
Corynebacterium pseudotuberculosis PAT10
Pathway
cpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CpPAT10_0004 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpz03400
]
CpPAT10_0004 (recF)
DNA repair and recombination proteins [BR:
cpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CpPAT10_0004 (recF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
ABC_tran
AAA_27
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AEK91348
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Position
3649..4863
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AA seq
404 aa
AA seq
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MYIRELSLRDFRSWADCHVNLEPGVTVFVGRNGFGKTNIVEAIGYIAHLGSHRVSQDSPL
VHQGKDSARVSVTAVNQGRELTAHMLIKSKGTNQAQINRTRLKSPRGLLGVVRTVLFSPE
DLSLVRGEPGERRRYLDHIVATRKPRLAGVKADYDKVLKQRNSLLKTASASLRRGYGADD
GTLCTLDVWDAQLARLGSELIHARHSLVEELTPLVHSAYARIAPESRPARINYESTVPVP
VAVTDAEEASSSIPDLDVLEASMLSQLGVQRKKEIDRGLTLVGPHRDDLAVLLGDYPAKG
YASHGETWSMALALRLAEFHLLSADGSEPILILDDVFAELDSKRRQKLVGIAMEAEQVLI
TAAVGDDLPDNLAESVVHRHTVTMTDTSEGRISELDKEGTSDEQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgtacattcgcgagctatcgctccgagattttcgttcgtgggcagactgccacgtgaat
cttgaaccgggtgtcacggtttttgtcggacgcaatggttttggaaagacaaacattgtt
gaggccatcggatatattgcgcatttgggttctcatcgagtctcccaagactctccgcta
gttcaccaaggcaaagactctgcccgggtatctgttactgctgttaaccaggggcgtgag
ctcaccgctcatatgctgattaaaagtaagggcaccaatcaggctcagatcaatagaacc
cgattgaagtctcctagaggccttttaggcgtggttcggactgtcttgttttctcctgag
gacctgagcctagtccgtggtgagccgggggagcgtcgacgctatctagatcatattgtt
gctacgagaaaaccccggttagctggcgtaaaagctgattatgacaaagttttaaagcaa
cgaaattcgctgttaaaaacagctagtgcatcgcttcgccgaggttacggcgcggatgat
ggaactctatgcacactggacgtgtgggatgctcagcttgctcggcttggcagcgagctc
atacacgctcgacacagcctcgttgaagagctcactccgcttgttcactccgcatatgcc
cgaattgctcctgagtcacggccagctcgcattaactatgaatctacggttcctgtgccg
gttgctgtaacggatgccgaggaggcgtcgtcaagcattcctgacctggatgtactggaa
gcctccatgctttcgcaactgggagtgcagcgaaaaaaggagattgataggggattaacc
ctggtagggccacatcgagacgacttagccgttttattgggcgactatccagctaaaggt
tacgcaagccacggggaaacctggtcgatggcgttagctttgcggttagcagaatttcac
ctgcttagtgcagacggttctgagcctattctgatactcgacgatgttttcgcggaacta
gactccaaacgcagacaaaaactcgtggggatagccatggaagcagaacaagtactgatt
acggccgctgtaggtgacgatctgccagataacttggcagaatcagtggtacatcgtcat
acggtgaccatgaccgatacatcagaagggcgtatttctgagttggacaaggaaggaacg
agcgatgagcaataa
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