Cherax quadricarinatus (Australian red claw crayfish): 128684942
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Entry
128684942 CDS
T09502
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cqd03000
]
128684942
Transcription factors [BR:
cqd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128684942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
128684942
NCBI-ProteinID:
XP_069955598
LinkDB
All DBs
Position
5:complement(5700379..5837211)
Genome browser
AA seq
1248 aa
AA seq
DB search
MSHEVLDASPTSKCAIEDVSEEKDDVKRKSRNLSEKKRRDQFNLLINELSSMVASNTRKM
DKSTVLKATIAFLKNQKEISVRCQNQEVREDWKPSFLTNEEFTHLMLEALDGFIITVSCS
GRVLYTSDSVTPILGHLPSDLSGTPLYDLMLEEEREDMNHFLSNPAMAPNPNTWFDDTKE
KYTVAIHLKRGTIHTSDSIQYERVHLTGYFERYNCPSEDGVLDFSCSEAEDSVSVSSCSR
NGGGGLFQSSLVHPQVSQETTKLVFVAIARMERPQLVREMMIIEPTKTEFTSRHSLEWKF
LFLDHRAPTIIGYMPFEVLGTSGYDYYHVDDLDKIATCHEQLMKTGKGTSCYYRFLTKGQ
QWIWLQTHYYITYHQWNSKPEFIVCTNTVVSYSDVKAELSQEFVPDACHSEIEIDQPEGS
LILSNTSVAGAGSSGTLVLSNASVSGAGLSGSLVLSNNGVSGAGPSGSLVLSNTSVSGAG
SSLTATMGELVEPLPDEKPVIQVSRASLTDPSRLQSLHLQQHTQPPSEQQTQHQQHSFQV
QQQIHHQQQQLQLQEDQQQHEEQQNQQQQQLQNLHLQHCITVQSQSSQLPSALSQQSSSA
FQSSNSKTTQQIQQQQQNQQQQQQQEHLQQQQQQQLQQQQQLQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQHHQQQQKQQQHHQQQQPQQQQQQQKQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQQIIGLQDETVVGLQDSVNVSQQSL
APVSPSSQHSVYMSPQTPQHLPSRGEPPPWPSKALSDDGTIETTPFIKLKVPAKSWGHFN
QSSTIKESSQYSGGSSLSDGGSSTKRLRLQHAMQKQQQQQQQQHEQKPSQLLIDDLAPPV
SPCSDVSVTSHVSHGSIQQESNVHYSSKSVNKERYYRKIEFPPEVSRSLSSRLSGSCEEE
KKEDHFLHMMVMSPSGSASSHTSGGGYGVEQQYLGCSNGAPQYVAGADTAAATAAVCSTA
AQVVQIAAVPFSPVIPLNPVVTNLSVQLPPVPTTEGLRQSLVLSPDQKQLQDQLRRKHAE
LKQQILRQQEELRQVNDQLIMAQYGSLSVQQVYKGGLQYTTTSSTGGFQSSIAVGSSVGG
VLGVGTSSIPVSAALHPATGTVTLATGTLAGASSSIVQPVAITSPPSLQSPTITVSTLNP
AQVSIQGVNTQGVAVPYQLSHQQAQMLFAQAGGAGQAHIQSQQHQANK
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatgaggtcctggacgcatcaccgaccagcaagtgtgcgatagaggatgtcagt
gaggagaaggatgacgtcaagaggaagtctcgtaacctctcagagaagaagaggagggac
cagttcaacttgctgatcaacgagctctccagcatggtcgcttccaatacccgcaagatg
gacaagtccactgttcttaaggccactattgccttcctcaagaaccagaaagagatctcc
gtgaggtgtcagaaccaagaggtgagggaagactggaaaccttccttcctcactaacgag
gagtttactcacctcatgcttgaggcattggatggcttcattattactgtgtcttgttct
ggacgggttctctatacctccgactcagtcactcctatcttgggacatttaccaagtgac
ctgtctgggacacctctatatgaccttatgttagaggaagagagagaggatatgaatcac
tttctttctaatccagcgatggcgcccaaccccaacacctggtttgacgataccaaagaa
aaatacacagttgcgatacatttgaagcgtggaacaatacacacctcagacagcatacag
tatgaacgagtacatttaactgggtatttcgagcgatacaattgtcctagtgaagatgga
gtgctcgactttagctgcagtgaagctgaggattccgtatctgtgagtagttgtagtcga
aatggtggtggaggcttgtttcagagttccctcgtccacccacaagtgtctcaggaaacc
acaaaattagtctttgtggcaatagcaagaatggagaggcctcaactcgtacgagaaatg
atgattattgaaccaaccaagactgaatttacttcaagacatagcctggagtggaagttc
cttttcctcgaccacagagcaccaactattattggttacatgccatttgaagtcttggga
acatctggatatgactactatcacgtagatgacttggataagattgcaacgtgtcacgaa
caattgatgaaaaccggtaaagggacctcatgttactacaggttcctgaccaaaggtcag
cagtggatctggcttcagactcattattacatcacctaccaccagtggaactccaagcca
gaatttattgtctgcaccaatactgttgtcagttatagtgatgtgaaagctgagctgtct
caggagtttgttccagatgcatgtcattctgaaattgaaattgatcagcctgagggtagc
ctgatcctgagcaacaccagtgtagctggtgctggatcctcaggtaccctggtgctgagc
aatgctagtgtgtcaggtgctggactctcaggtagcttggtgttgagcaacaatggtgtg
tcaggtgctggaccctcaggtagcctggtgctgagcaacactagtgtgtctggtgctgga
tcctcactaacagccacaatgggagaactagtggaacctctacctgatgagaagcctgtt
atacaagtcagtagagcttctctaactgacccctcacgccttcaatccctacaccttcag
cagcacactcaaccacccagtgaacaacagacacagcatcaacagcactcatttcaggtg
cagcaacagattcatcatcaacagcaacaattacagttacaggaagaccagcaacaacat
gaggagcagcagaaccaacaacagcagcagcttcaaaaccttcatttacagcactgtatt
acagttcaatcacaatcatctcaacttccttctgctttatctcagcaatcatcatcagcc
ttccagtcatcaaattccaaaactactcagcaaattcaacagcagcagcagaaccaacaa
cagcagcagcagcaagaacacctgcagcaacagcagcagcaacaactgcaacagcaacaa
caattacagcagcaacaacaacagcagcagcaacaacaacagcagcagcagcagcaacaa
cagcagcagcaacaacaacagcagcagcaacaacagcaacagcagcaacagcagcagcag
caacagcagcagcagcaacaaaaacagcagcaacatcaccagcagcaacaaaaacagcag
caacatcaccagcagcagcaaccacagcagcaacaacagcagcaaaagcagcagcagcaa
caacagcagcagcagcaacaacaacagcagcagcagcagcagcagcagcagcaacaacaa
caacaacagcagcagcaacaacaacaacaacagcagcagcagtcgcaacaaataatagga
ctacaagatgaaacagtagttgggttacaggactcagttaatgtatcacaacagtctttg
gcaccagtgtcccccagcagtcagcactctgtgtacatgtctccacaaacaccacagcat
cttccatcaagaggagaaccaccaccatggccatctaaagccttatcagatgacggaacc
atcgagacaactcctttcatcaagctgaaagttccagcaaagagctggggtcattttaac
caatcaagtaccataaaagagtctagtcaatacagtggtggtagcagcttgagtgatggt
ggatcgagtaccaaacgactgcgattgcaacatgcaatgcagaagcaacagcagcaacaa
cagcagcaacatgaacagaagccatcacagttacttatagacgatctcgctcctcctgtc
tccccgtgctcagacgtttctgtcacctcacatgtctctcatggctccatacagcaggaa
agcaatgtacactacagttcaaaatctgtgaataaggaacgatactaccgtaagatagag
tttcctcctgaggtgtcacgttctttatcatcacggctctctggttcctgcgaggaagag
aagaaggaagaccactttcttcacatgatggttatgtcaccctcgggcagtgccagctca
catacttcaggcggtggttatggagtggagcagcagtacctagggtgcagtaatggtgca
ccacagtatgtggctggggcagacactgctgcagctactgcagcagtgtgtagtacagca
gctcaggtggtgcagatagctgctgttccattctctcctgtcatacctctcaaccctgtg
gtgacaaacctttctgtacagctgccacctgtaccaacaactgagggtcttcggcagtcc
ctggtattaagtcctgaccagaagcaacttcaagaccagctaagaaggaaacatgcagaa
ttaaaacagcaaattttgcggcagcaggaagagctacggcaagttaacgaccaactcatt
atggctcagtatggcagcttaagtgtacaacaggtttataagggaggactgcagtacact
actactagctcgactggtggctttcagagtagtatagcagtgggctccagtgttggggga
gtcttaggtgtgggcaccagcagcattccagtgtctgcagcacttcatccagccactggt
acagtcaccctggcaactggtactctggcaggggcatcatcatccatagttcagccagta
gctatcacgtcaccaccctcacttcagtcgcctacaatcactgtatccactttgaatcct
gcacaagtaagcattcagggtgttaacactcagggagtggctgtgccctatcagttgtcc
caccaacaggctcaaatgctatttgctcaagctggaggtgctggccaggctcacattcaa
tctcaacagcaccaagccaacaagtaa
DBGET
integrated database retrieval system
