Cherax quadricarinatus (Australian red claw crayfish): 128685398
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Entry
128685398 CDS
T09502
Name
(RefSeq) sonic hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cqd01002
]
128685398
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cqd00536
]
128685398
Peptidases and inhibitors [BR:
cqd01002
]
Cysteine peptidases
Family C46: hedgehog family
128685398
Glycosaminoglycan binding proteins [BR:
cqd00536
]
Heparan sulfate / Heparin
Morphogens
128685398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Hint_2
Motif
Other DBs
NCBI-GeneID:
128685398
NCBI-ProteinID:
XP_053627899
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All DBs
Position
7:complement(7874412..8139335)
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AA seq
470 aa
AA seq
DB search
MGQGARARCHWWAARTPHLWWQQVYTCLIILTVLSGSFVQCCGPGRGGGRRRSPRKLRPL
VFKQHVPNVSEKTLGASGLTEGPITRDDPRFQSLVPNYNTDIIFKDEEGTGADRLMTERC
KEKLNTLAISVMNQWPGVKVRVTEGWDEELHHAPHSLHYEGRAVDITTSDKDRSKYGMLA
RLAREAGFDWVYYESRSHIHCSVKSESSAASKLGGCFPGRGTVMTPSGLVPVSDIREGDE
VQVMRADGSLVFSPVLMFLHRDLGVSRSFLQLTTSSGAALTLTPSHLIFLLQRRLVPSLT
PTVADALELGGVVLAGRVEAGDFLLVTGQKGVRLEKVVAIRHELGEGVFAPLTAEGTVVV
DGFVASCYAVIDSQAIAHWAFLPVRLYSNLKEAVLALLRALGAITPSFPSKPVKVYNDKR
FFNGSRYNVRWREEALGNSVDDRDTIHIHWYPRLLYTLASWLLPAHLVYS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagggtgcgcgcgcgcgatgccactggtgggctgcccgaaccccgcacctgtgg
tggcagcaggtgtacacgtgtttgatcatcttgaccgtgttgagtggatcattcgtgcag
tgttgcggtccgggtcgtggcggaggtcggcggcgctcgccccgcaagctgaggccgctg
gtgttcaagcaacatgttcccaacgtgtcggagaagaccctaggggcctcgggcttgaca
gagggcccaattacccgtgatgacccgaggtttcagagccttgtacccaactataacaca
gatatcatctttaaagacgaggagggcacgggcgccgacagactgatgacagagcggtgt
aaggagaagctgaacacgctggccatcagcgtcatgaaccagtggcctggcgtcaaggtc
cgagttaccgaaggatgggacgaagagctacaccacgccccacacagcctccactacgag
ggacgcgccgtcgacatcactacctccgataaggaccgctcaaaatacgggatgctggcg
cgcctggcgagggaggcaggctttgactgggtttactacgagtcccgatcccacatccac
tgctcagtcaagtcagagtcgtcggcggccagcaagctgggtggttgttttcctgggagg
ggcacggtgatgacaccgtcaggactagtgccggtgtcagacatccgtgagggcgacgag
gttcaagtgatgcgtgccgacggctctctggtcttcagtcctgtccttatgttcctgcac
cgtgatcttggagtatcccgctccttcctgcagctgactacgagcagtggcgctgctctc
acactcacgccctctcaccttatcttcctgttacaacgtcgcctcgtgccctcgctcacg
cccactgtagccgatgcattggagctcggcggagtcgtactagcgggaagggtggaagct
ggagatttcttgcttgtcactggccagaagggtgtgcggctcgagaaggtagtggcaatt
cgacacgaacttggagaaggagtctttgcccctcttactgctgagggaacagtagtcgtg
gacggatttgtagcctcgtgctatgccgttatagactcccaggcaatagctcactgggct
ttcctcccagtcaggctgtacagcaacctaaaggaggctgtcctagctctgcttcgtgca
ttaggggccatcaccccatcttttccaagtaaacctgttaaagtatataatgataaacgt
ttcttcaatgggagcaggtacaacgtgaggtggcgggaggaggccctaggtaacagcgtg
gacgacagggataccatccacatccactggtacccgcgactcctctacaccctggcctcc
tggctcctacctgcgcacctcgtctactcctag
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