Cherax quadricarinatus (Australian red claw crayfish): 128685642
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Entry
128685642 CDS
T09502
Symbol
DNAlig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128685642 (DNAlig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqd03400
]
128685642 (DNAlig3)
Enzymes [BR:
cqd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
128685642 (DNAlig3)
DNA repair and recombination proteins [BR:
cqd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
128685642 (DNAlig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
LIG3_BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
zf-CCHH
mRNA_cap_enzyme
AAA
Motif
Other DBs
NCBI-GeneID:
128685642
NCBI-ProteinID:
XP_069938756
LinkDB
All DBs
Position
1:complement(69814377..70160777)
Genome browser
AA seq
1059 aa
AA seq
DB search
MIARALTLACQFDRSCQQFVSLVLFYKRTLEPACVTFWHSITRKDFFNYKLQDFSSKSPP
YPDKVFRPVFLYHSFVQRSLGLAEMSSLPFCAEYDKRGAAKCKKCKEKCEKGVLRIGKIV
PNPFSESGGEMKQWHHVDCIFDMFKRARATTKKIEDPVEDIDGWENLEEEDKKKIRALID
DLQNNITPKKATPKKQTPNLQNNTTPKKATPKKETPQKKAPPQTSKYTGTPKTVKPSRPE
TSNSDSSKPALPPRADPGTDRNHKDNSFREFRRICACVADESSYLGKTEILSNFFKNGTS
KNGFEGDLRLWVKLLLPGVVKRIYNLQSKQLVKLFSQLFGTNLEEMIEDLEKGDVAETVR
EFFERSTVLPPIKKSILSIQDVDEFLEELSGKTREEEQSMLLKQIAKKSTANDLKMIVRL
IKGDLRINAGAKHILDALHPEAYEAFQTTRNIDTVLDQILDAGSSGVKFQMKAQVMTPVL
PMLAEACKSVDYAFKKCPSGAMFAEIKYDGERVQVHKKGSKFMYFSRSLKPVMSHKVSHF
KDYIPKAFPHGKDLILDSEVLLISTKTGNPLPFGTLGVHKKAEFQDANVCLFVFDCIHYN
GEDLMNVPLSERREILEENMTEIKNHIMFSEMKLINKKEDLREMIKFVLQEGLEGLVLKD
INSIYEPGKRHWLKIKKDYLNDGAMADSADLVVLGAWYGTGRKGGMMSVFLMGCYDARID
KWCTVTKVHTGFDDAALERLQTELDMIKISQDPDRVPSWLKCNKPMIPDFVSADPKKAPV
WEITGAEFTRHQIHTGDGISIRFPRVTRERNDKTWKEATNLSELQELYKNSRECLDFEAL
ASDGNDKTDDDDSSKKNGNSGTSTPVKTPMSGGPSSSSSFNTSPNSAKGEMWKNKVQKTL
SRFSKDVEEDNTEEKKKSDTGKKGLKQEKRKSEDSDRPSKKSCKYGAQCYNNNEAHQLFY
EHPSSLHIEPPTVNPLPDIFIGIQVSIPNNTEKIDELKRYVIAYGGEVLPEYRAADATHI
IISNDLSSAVTNTGTKVVVDWLWDSIKLQKLQPTKKYCR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaagagcactgactttagcatgtcagtttgatagatcttgccagcagtttgtc
tcattggtgttgttttacaagagaaccttagaacctgcttgtgtcacattctggcatagc
atcaccaggaaagatttctttaattacaaacttcaagacttttcatcaaagtctcctcca
tatccagataaagttttcagacctgtgtttctttatcattcatttgtgcaaagaagcttg
gggcttgcagagatgtcatcattaccattctgtgcagaatatgacaagaggggtgcagca
aaatgcaagaagtgcaaggagaaatgtgaaaaaggagttcttcggattggcaagattgtt
ccaaacccattttctgaatctggaggagaaatgaagcagtggcatcatgttgattgcata
tttgacatgttcaagcgtgcccgagccactactaagaagatagaagatcctgtggaagat
attgatggctgggaaaaccttgaagaagaggacaagaaaaagatacgtgctttaattgat
gatcttcaaaacaatatcacccctaagaaagccacacctaagaaacaaaccccaaatctt
cagaataatactacccctaagaaagctacacccaagaaagaaactccacaaaagaaagct
cctccacaaacttcaaaatatacaggaactccaaagactgtgaagcccagtcgaccagaa
acatcaaattctgactcttcaaagcctgcactacctccgagagcagatcctggcacggac
cgaaatcacaaggacaactcttttagggaatttcggcggatatgtgcgtgtgttgctgac
gaatcaagctatttgggcaaaactgaaatattgtcgaacttttttaaaaatggcactagc
aaaaatgggtttgagggtgacttaagactttgggtgaagctgcttctccctggagttgtg
aaacgaatatacaatctccaatccaagcaactggtcaaacttttttcacagctgtttggc
actaatctggaggaaatgattgaagacttggagaaaggtgatgtggcagaaacagtgcgg
gaattttttgagagatccacagttcttcctcctattaaaaaaagtattttgtccatacaa
gatgttgatgaattcttagaggaattgagtggaaaaacacgagaagaagagcaatccatg
cttctaaaacaaattgctaaaaaaagtactgctaacgatttgaagatgatcgtccgtttg
atcaagggagatctccggatcaatgcaggagcaaaacacatattggatgctcttcatccg
gaggcttacgaagcattccaaactacgcgcaacatagatacagtattggaccaaattttg
gatgctggcagttctggagtcaagttccaaatgaaggctcaagttatgactccagtcctt
cccatgctggcagaggcatgtaaatcagttgattatgcttttaagaagtgcccaagtggg
gcaatgtttgcagaaattaaatacgatggagaaagagttcaggtccacaagaagggcagc
aagtttatgtatttttcacgttcactaaaacctgtgatgtctcataaggtatcccatttt
aaggactacatacctaaggcttttcctcatggtaaagaccttattcttgattctgaagtg
ttgctcatcagtacaaaaacaggaaatccattgccatttggaacactgggagttcacaag
aaagcagagttccaggatgcaaatgtgtgcctttttgtctttgattgcattcactacaat
ggagaagatctgatgaatgtgccattgtcagaacgtcgtgaaatcctggaagagaacatg
actgagattaaaaaccatattatgttttccgagatgaagctaataaataaaaaggaggat
ttgcgggaaatgattaaatttgtcctccaggaaggtcttgaaggcttagttctcaaagat
attaatagcatttatgaacctggaaagcgccattggctaaaaatcaagaaggattacttg
aatgatggagcaatggctgactctgctgacttggtggtgctgggagcttggtatggaact
ggaagaaaaggaggaatgatgtcagttttcctgatgggatgctatgatgctagaattgac
aaatggtgtactgttaccaaggttcacacaggcttcgatgatgcagctttggagcgacta
caaacagagctggatatgataaagatcagccaagatcctgatcgtgttccttcatggctg
aagtgtaataagcccatgattcctgactttgtgtctgcagatccaaaaaaagcgccagtt
tgggaaatcactggagcagagttcacgcgtcatcagatccacacaggagatggaatttcc
attagatttccacgagttactagagaacgtaatgacaagacatggaaagaagccacaaat
ctttcagaattacaggagctgtacaagaattcaagagaatgtttagacttcgaagcacta
gcctctgatggtaatgataagacagatgatgatgacagcagtaagaagaatggaaactca
ggaacctccacacctgtcaaaactcccatgagtggaggaccatcatccagtagttcgttt
aatacttcaccaaatagtgccaaaggagagatgtggaagaataaggtccagaagacactc
agtagattcagtaaagatgttgaagaggataacactgaagagaagaaaaaatcagataca
ggaaagaagggattgaagcaggagaaaagaaagtcagaggactcagacagaccttcaaaa
aagagttgtaaatatggtgcccagtgctacaataataacgaggctcatcagcttttctat
gaacatccttcttcacttcatattgaacctcccactgtaaatccacttccagatatattc
attggtattcaagtcagtataccaaacaacacagagaaaattgatgagctgaaaagatat
gttatagcctatggaggagaggttttgcctgagtaccgtgccgctgatgccacacacatt
attatttccaacgatttatcatcagcagtaacaaacacaggaaccaaagtagttgtggac
tggttgtgggacagcattaagcttcagaaactacaacccaccaaaaaatactgcaggtag
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