Cherax quadricarinatus (Australian red claw crayfish): 128686097
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Entry
128686097 CDS
T09502
Symbol
park
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd04120
Ubiquitin mediated proteolysis
cqd04137
Mitophagy - animal
cqd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128686097 (park)
04120 Ubiquitin mediated proteolysis
128686097 (park)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128686097 (park)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqd04131
]
128686097 (park)
04121 Ubiquitin system [BR:
cqd04121
]
128686097 (park)
03029 Mitochondrial biogenesis [BR:
cqd03029
]
128686097 (park)
Enzymes [BR:
cqd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128686097 (park)
Membrane trafficking [BR:
cqd04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
128686097 (park)
Aggrephagy
Other aggrephagy associated proteins
128686097 (park)
Xenophagy
Other xenophagy associated proteins
128686097 (park)
Ubiquitin system [BR:
cqd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128686097 (park)
Mitochondrial biogenesis [BR:
cqd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
128686097 (park)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
128686097
NCBI-ProteinID:
XP_053628739
LinkDB
All DBs
Position
9:complement(34581123..34663273)
Genome browser
AA seq
554 aa
AA seq
DB search
MLRFFIELLAGLWRIILVMIGLGTPQTAISDKLEIFVRTNTGEKVFVCLDPSWTVEKIKI
ALAPKLNSSSKDLRIIFAGKELLDDMVIRDCDLGNHSFLHAVRVVSKDKGGNGSTSIAST
SAVSNVEYLNEVSSFERAAKEKSVESLKKLESRADQSTSSSTDKLEGQTTKAEILTASGV
SAPPSESTEPSSMLTGRSCRLLCDASTAMTIQMTEAEQKTIRDLMNSDGERERPHFYVYC
VKPCNSVQVGKLRVRCVSCKQGALTLHRDPCNWQDVLNPGQISATCETVGCNGSQAEFFF
KCRNHETSGEDDSSVALYLVRANLPAVPCLACTDISSPVVVFECVDAHVMCLDCFVTFCV
SRLNERQFIQDLSLGYTLPCPIGCPDSLIREVHHFKLMGDNHYERYQRWGTEEAVLAAGG
VLCPYPGCGQGIIPDQDCRRVACTGGCGYVFCRLCLQGYHIGECHPEDGNELNVVEGSGG
FSVDPSRAASSRWDEATSMAIRVTTKPCPKCRTPTERDGGCMHMVCTRGSCGFHWCWVCQ
TEWTRECMAAHWFG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgattcttcattgaattacttgctggtctatggcgcatcattctggttatgatt
gggcttggtacaccacaaacagcaatctcggacaagttagaaatctttgtcaggaccaat
actggggaaaaggtctttgtttgccttgatccatcatggacagtggaaaaaataaaaatt
gccttagccccaaaactgaatagttccagcaaagacttaagaattatttttgccggaaaa
gaattactagacgatatggtgattcgtgattgtgatcttggaaatcacagcttccttcat
gcagtcagggtggtatctaaggataaaggtggaaatgggtcaacaagcattgcttcaact
tctgctgtcagtaatgtggaatacctgaatgaagtctcaagctttgagagagcagctaaa
gagaagtctgtggaatcacttaagaaattggaaagtagggctgaccagtcaactagttca
tccactgacaaattagagggacagacaacaaaagctgaaattttgacagcctctggagta
tctgcaccaccttctgagtcaactgaaccatcttctatgctgacaggccgcagttgccgg
ctgttgtgtgatgcatccacagctatgacaatacagatgactgaggctgaacaaaagacc
atccgtgaccttatgaactctgatggtgagagggaacgtccgcacttctatgtgtattgt
gtaaagccgtgtaactcagtgcaagtgggtaaactgcgagtaagatgtgtctcttgtaaa
caaggggctcttactcttcatcgtgatccttgtaactggcaagatgttctcaacccaggc
cagatctctgctacctgtgagactgtaggttgcaatggttctcaggctgaattcttcttc
aagtgtcgaaatcatgaaactagtggagaggatgactcctcagtggccctgtaccttgtt
cgtgccaaccttcctgctgttccttgtttggcttgtacagacatttcgtcccccgttgtg
gtgtttgagtgtgttgatgctcatgtaatgtgccttgattgttttgttacattttgtgta
tcaagacttaatgaacgacagtttatccaagatttaagtctaggttatacattaccttgt
cctattggttgtcctgattctctaattcgtgaagtacatcactttaagttgatgggtgac
aaccattatgagcgatatcaacgatggggcactgaggaggctgtattagctgctggtggt
gtcttgtgtccatatcccggttgtggccaaggcatcatcccagaccaggactgtcgtaga
gttgcatgcactggtgggtgtggctatgttttttgccgactctgcctacaaggttatcat
ataggtgaatgtcatccagaggatgggaatgagcttaatgttgtggaaggcagtggaggg
tttagtgttgatccttcccgggctgcaagctctcgctgggatgaggcaacatcaatggct
attcgtgttacaacaaagccttgtcctaaatgccgaactcctacagaacgtgacggtgga
tgcatgcatatggtgtgcacacgtggttcatgtggctttcattggtgctgggtttgtcag
actgaatggacacgtgaatgtatggcagctcattggtttggctag
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