KEGG   Cherax quadricarinatus (Australian red claw crayfish): 128687103
Entry
128687103         CDS       T09502                                 
Symbol
Rbcn-3B
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
cqd  Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cqd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    128687103 (Rbcn-3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cqd04131]
    128687103 (Rbcn-3B)
Membrane trafficking [BR:cqd04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    128687103 (Rbcn-3B)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd ASA1 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_ACSF4 WD40_MABP1-WDR62_1st DSE1_N Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR75_1st TRM82_WD PAC11 Tricorn_2nd Beta-prop_SCAP
Other DBs
NCBI-GeneID: 128687103
NCBI-ProteinID: XP_069954449
LinkDB
Position
62:5825170..6036074
AA seq 1532 aa
MGSLNLVVPLIMWGREAPTHDISCVLFTRSCRTIVTGSRDGQICVWDFDPPTLKLTPRCL
LVGHTASVICLAQGGHGRGTTFIVSSSENGEMCKWDLRDGRCVEVLKSSNIHSSMTAYQM
LNVSDVRLFCVGNYPEILIYDPHTLDILFSLAARIQPDWISALHILRPPRRNDEVVLGVT
TGGWVKVWTVSEREVRPREPIYEHEAKMIHSLNALCLVCCTYNQRTVLIVSQDDWQIYDA
GDFSQLCRVGVTVGERWMGGDFLAADRVIVWTDMGQAYIYKLPTKLLKGKAVSCIVESRA
FHNKQVEGDNPVMYGIVQPQNDEQLVNSPSWQFMMIPLESGAEKLLLRGDCEGQVMLWRL
ADVSENQLQQISQVYPFQPLIFPATLNHSMSKAWAAMTPPPIGVLDQLEGEKNPPRITAS
LFLPLQGRLACGREDGSIILVPATETIMLHLLHGKHHHYHNWAQPMVLRGHQGRVNCLLY
PHGESSRYDMAHLVSGGIDFSINVWDMYTGNLVHRFVVQAGQVLQLLVPPPTCTPRIQNC
ICSVSEDHSVALLSIKERKLVLLASKHLYPVLSIKWRPEHDFLMVATHDGSVYVWQMETG
HLDRVLQGVTAEEVLGACDEHLTASGSGSGGASSEAGLANPAVHLFRGLRHRNLAAIRHA
AQRGIQQVLGEQNNQQDIHDSSKMRTCPLMIQGLRTNKQDANSHVLFFDIEALIVQLLSD
EYTLMSPGTLEANELIMSSQYQRMNVLTHPASPEAAKKIAEFFGKVKDKAGEMEKKMKEK
DKHDILGRAKDKTTHVEKKMRERDQQGLLSRVKESAESVQNLIQNKVEQSGFRPTTLNSA
KDGNGSGRVHIPRHLDVTAQTLQIGQMLMSLLHSWGLDPSLDHTCEHILGLLKPRVPVSY
GLISKSGYMALFMPTWHPVRDADMPPINLPPDLASELPPEMVELEHRTQVFTCRGHWEVS
PALTTHHLLALVSVANTLQDMNAATLIPEQERRRKNHIQSSKANQMVTNHEDEFSRQQSV
IKQGWSTLTALHTVLLPDCVAAAGAPTYQPPMVEILARRWQDRCQEVREAAQALLKTELS
RMGANGRQKLVELWSPHLPTHTEPLPTGPTSYSNPEAQHPPRPEHPATKTTSGAPSVNTT
LNGTSGNSSVGSTSSERTMEPHPHLDEDHYDEEMDGETCREVVAQTEGRRKQATAIILLG
VIGAYHGQDSAEGFGLGNLAMQTSKALAYLVLAPPAPKLPAHTPLRRAAIDLIGRGFPVW
EPYLDVAKVLLALLDLCADTDRLAPSMKYGLPLIPEADSCRTASNALTLIAEARPPAFIT
TMAREVARFNALQQNAQSLQLNIHNTVLHRAKTEILRVMEYLIVHKRCHIMDLMVEVMDI
VLHCVDSGHLKSRGLNEVFPSICGFPQVSHCPHTRRIATGAKNGNIAIYELRAYKCQMIA
AHGSSVTALSFSPDGKYLASYSIGENKLSFWQTSSGMFGLGASQTKCTKTFSTAPVPDIV
RMNPQRLPKLVWISNKTVVHMMADGTEHRFNA
NT seq 4599 nt   +upstreamnt  +downstreamnt
atgggatcattgaacttggtagttcctcttattatgtggggtcgtgaggcccccacccac
gacatctcctgcgtcctcttcactcgcagttgccgcactattgttacagggtcccgggat
ggtcagatatgtgtttgggactttgatcctcccactctcaagttgacgcctcgttgcctt
ttggttggtcatacagcaagtgtaatatgccttgcgcaaggcggacatggacgaggcact
accttcatcgttagctcctcagaaaatggagaaatgtgtaaatgggacctcagagatgga
cgttgtgttgaggtcctcaaatcctccaacattcactcatccatgacagcctaccagatg
ctgaatgtgagtgatgtacgattgttctgcgttggcaactaccctgaaattctcatatat
gatccccacaccttggatatccttttctccttggctgctcgtatccagcctgattggata
tccgcacttcacatcctacgcccaccgagaagaaatgatgaggttgtgctaggagtaaca
acaggtggttgggtcaaggtatggacggttagtgagagagaggtgaggcctagggagcca
atatacgaacatgaggccaaaatgatccattccctgaatgctctatgcctggtgtgctgc
acttacaatcagaggactgtccttattgtctcacaagatgattggcagatatacgatgct
ggagatttttctcagttgtgtcgtgttggagtgactgttggggagagatggatgggtgga
gacttcctggctgctgaccgtgtcatagtatggactgatatgggccaagcttatatttac
aaactacctacaaagttattgaagggcaaagcagttagttgcatcgttgaaagccgagct
tttcacaacaaacaagttgaaggagacaatcctgtcatgtatggcattgtccaacctcag
aatgatgagcaactagttaattcaccgtcgtggcagtttatgatgattccattggagagc
ggggcagagaagttgctgctgcgaggagattgcgaaggccaggtgatgctgtggcggctg
gctgatgtgtcagaaaatcagctacaacagatcagtcaagtgtaccccttccagcctctc
atcttcccagcgactctcaatcactctatgtcaaaagcctgggcagctatgaccccaccc
ccaataggtgtgttggatcagcttgaaggggagaagaatcccccaaggatcacagctagc
ttgtttctacctctccagggccggctcgcatgcggccgagaggatgggtccatcatcttg
gtgcctgccaccgagactattatgcttcaccttctccatggcaaacaccatcactaccat
aactgggctcagccaatggtcttacgtggccaccagggtcgtgttaactgtctcctctat
ccccatggtgagagttcccgctatgacatggcccacctcgtatctggaggcattgatttc
tccatcaatgtttgggacatgtacacaggcaacctggtgcacagatttgtagtccaagca
ggtcaagttttacagcttctggtgcccccacctacttgtacacctcgcattcaaaactgc
atctgtagtgtctctgaagaccacagtgtggcactgctaagcatcaaggagcgcaagcta
gttctgctagcatccaagcatctttatcccgtgctcagcatcaaatggcgtcctgagcac
gacttcttgatggtggccacacacgacggatcagtctatgtttggcagatggagacaggt
catctggatcgcgtcctccaaggtgtgacagcggaagaggtcttgggagcttgtgatgag
cacttgacagcctctggcagtggtagtggcggtgcaagctcggaagctgggcttgccaac
cctgctgttcacctcttcagaggtctcaggcatcgaaacttggctgccattagacatgca
gcacagcgggggatccagcaggtgttgggagagcaaaacaaccagcaggacatccatgac
agctccaaaatgaggacgtgtccactcatgattcaaggactccgtacaaataaacaggat
gccaactctcacgtcctcttctttgatattgaagctttaattgttcagctcctgagtgat
gaatacaccctcatgtctcctgggaccctcgaagccaacgagttgatcatgagcagtcag
tatcagcgcatgaacgtgcttactcatcctgcttcaccagaagcagcaaagaaaatcgca
gaattcttcggtaaggtgaaggacaaagctggagagatggagaagaagatgaaagaaaag
gataaacacgatatactggggcgtgccaaggacaaaactacgcatgtggagaagaagatg
agggagcgagatcaacagggcttgctgtcacgggtcaaggaatctgccgagagtgtccag
aaccttatacagaacaaggtggaacagtcgggattccgccctaccacactcaactcagcc
aaggatggtaatggtagcggtcgtgtacacatcccgaggcatctggatgttactgcacag
accttgcagattggacaaatgctgatgtcattgttgcactcgtggggactggacccatca
ctggaccacacatgtgaacatattcttggtcttctcaaacccagggttccagtgtcctat
ggacttatatcaaagtctgggtatatggcactgttcatgcccacttggcatccagtgcga
gacgcggacatgcccccaattaacttacccccagacctggcttcagagttaccgccggag
atggttgaactggagcacagaacacaggtgttcacttgtcgtgggcactgggaggtttct
ccggcacttaccacccaccacctgttggcgcttgtctcagttgccaacacactccaggac
atgaatgctgcaactctcattcctgagcaggagagacgacgcaaaaatcatatccaaagc
tccaaagccaaccaaatggtgaccaatcacgaagatgaattctctcggcaacagtctgtg
ataaaacaaggatggtcaacgctgacagctctacatacagttctcctgcctgactgtgtt
gcagctgctggagccccgacatatcagcctcccatggtggaaattcttgcccgcagatgg
caagaccgttgtcaagaggtcagggaagcagcacaggctctcttgaaaacagagctgtct
cggatgggcgccaacggtcggcagaaactggtagagctgtggtcgcctcacttgccaaca
cacacagaacctttgcccactggcccaaccagctacagcaacccagaggcccagcaccca
cctcgacccgaacatcccgccaccaagaccacctcaggagcaccttcagtgaataccaca
ttaaatggcacaagtgggaacagtagtgttggaagtaccagcagcgagaggacgatggag
cctcatccacatctcgatgaggaccattatgatgaagaaatggatggggaaacctgccgg
gaagttgtggcgcagacggaaggcaggaggaaacaggcaacggctattattctactgggg
gtgattggtgcataccacggtcaggactctgcagaaggttttggtcttggcaaccttgca
atgcaaacaagtaaagctcttgcatatctagtattagctccaccggcgcccaagttgcca
gcacacacacctttacgacgagcagcaattgatttaataggccgaggattccccgtttgg
gaaccctacctagacgtggctaaggttctgctagcgttgctggacttgtgtgctgatact
gaccgcttggcacccagcatgaagtatgggctgccactcataccggaagctgactcgtgc
cgcaccgcttccaatgcactgacactgattgccgaagccagaccaccagccttcatcaca
accatggcacgggaagtagcccgctttaatgcactgcagcagaatgcgcaaagcttgcag
ttaaatatccataacacagtccttcatcgtgccaaaacggagattctccgagtaatggag
tacctcattgttcataaaagatgccacataatggatcttatggttgaggtgatggacata
gtgttacactgtgttgattctggtcatctcaagagccgggggcttaatgaggtgtttccc
tccatctgtggtttccctcaagtctcccactgtcctcacacccggcgcattgctactggg
gcaaaaaatggcaatattgctatatatgaactaagagcatacaagtgccagatgattgca
gctcacgggtcatcagtgacagccctctccttctctcctgatggcaaatacttggcgtcc
tattctattggggaaaataaactctcgttttggcagacatcatcggggatgtttggcttg
ggagcttcacaaaccaaatgcacaaaaacattttccacagcaccagttcctgatattgta
cgcatgaaccctcagcggcttcccaagttggtctggatctccaataaaactgtcgtccac
atgatggctgacggaaccgaacataggtttaatgcatag

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