Cherax quadricarinatus (Australian red claw crayfish): 128687369
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Entry
128687369 CDS
T09502
Symbol
Rrp4
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128687369 (Rrp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128687369 (Rrp4)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128687369 (Rrp4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128687369 (Rrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
128687369
NCBI-ProteinID:
XP_053630773
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All DBs
Position
40:5608760..5618695
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AA seq
290 aa
AA seq
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MEIQLASELPRVKAMVGAQGSSRPRLVTPGEVISQDTSFMRGHGTYMEEGVQVASVAGYV
TRVNRLITVTPLRQVYQGAVGDTIVGRITQVQNNRWKVDVNSRLDAELRLSNIHLPGGEQ
RRSNLEDERGMRGLLKNGDLVCVEVQKITDDGLLRLAARSTKFGKLSQGTLLAVSPSLIV
QDKQRMHDLPCGARVVFGANGYVYITPIIPQEQSSSYTVNFEEVPVDIRKTIGRLRNCIK
LLAHHSIMISPTSVMAAFDLSTEQEYEVKDLLKPNIMQHIAMTTVQMMNE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcaactagcgagtgaactccctcgagtgaaggcaatggttggtgcccaaggt
tcgtcaagacctaggctagttactccaggagaggtgatatcccaagatactagttttatg
agaggtcatggcacatatatggaagaaggtgttcaggtagcatcagttgcaggttatgta
actcgagtaaatcgtctcataactgtgacccccttgcgccaggtatatcaaggtgcagtt
ggtgatacaattgttggacgcattacacaagtccagaacaacaggtggaaagttgatgta
aattcaagattggatgcagagctcagactgtcaaatattcacttaccaggaggagaacag
cgacgaagcaatttggaggatgagcgtggcatgcgagggctgctgaaaaatggtgacttg
gtttgtgtggaagttcaaaagattactgatgatggattactaagacttgctgctcgatct
accaagtttggaaagctgtcccaaggcaccttgttggctgtgtcaccgtcacttattgtg
caggataagcagaggatgcacgaccttccgtgtggtgcacgagttgtctttggagcaaat
ggttatgtatacataacaccaataattccccaggaacaatcctcatcctacacagtgaac
tttgaagaggtccctgttgacattcggaaaacaattggacgtttacgcaactgtattaaa
cttttggcgcatcattctattatgatctccccaacaagtgttatggcagcttttgatctc
tccaccgaacaagaatatgaggtgaaggacttgttaaagccaaatataatgcagcatata
gccatgacaacagtacagatgatgaatgagtaa
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