Cherax quadricarinatus (Australian red claw crayfish): 128687418
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Entry
128687418 CDS
T09502
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128687418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128687418
03012 Translation factors [BR:
cqd03012
]
128687418
Enzymes [BR:
cqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128687418
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128687418
Translation factors [BR:
cqd03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128687418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_22
ATPase
AAA_19
PhoH
AAA_14
TsaE
AAA_16
eIF3_subunit
NACHT
AAA_25
RsgA_GTPase
ABC_tran
Complex1_LYR
Rad17
Motif
Other DBs
NCBI-GeneID:
128687418
NCBI-ProteinID:
XP_069948857
LinkDB
All DBs
Position
40:17737715..18009383
Genome browser
AA seq
1009 aa
AA seq
DB search
MYGRQGRGNYSDGGFRGDGGRGNKYRRRGGARGGRRGGHPQGLRGKEIGLWYAQKCRERK
DKDECCLPVISMNASQVRDVGRMLDSFDGGSNSSGNVSSFEGASSVLLATDDLGEEWDNR
ISSIMAQEFEDDGDKEKRPLSETFARRLENINESDFKRAYMANVHGNQLRDSDGLGALKG
EQFGLIRREDLDEKLYKDMVEQQTSKLYQQMLEVRKKLPSYKMRDEIVDAIQKHQVVVLS
GETGCGKTTQVAQFILENAIADGKGSTCRIVCTQPRRISAVSVAQRVADERGEKLGKSVG
YQIRLESVLPRSEGSILFCTTGIVLQWLQGDPVLSQVSHLVLDEIHERDMLSDFLICIAK
DLIKVRPDLKIVLMSATLNAKLFSEYYGGCPMLHIPGFTFPVKEYYLEDVLEITRFKFQD
ERRIPIWKRREHKENKEFEEMIAPYIRNLERSQKYSSQTLDELYKKSSEELNVELILELL
RYIAQQPPGAVLIFLPGWDKISKLHSMIQEDRMLGGRNYLVIPLHSMMPTANQREVFDRP
PKGVRKIVLATNIAETSITIDDIVYVVDGGFIKMKNYDKEANVTTLLPQWVTLANARQRR
GRAGRVQAGICYHLFTRAREQALDEYPLPEIQRSRLEEIILHIKILRLGSVKPFLLEVMM
PPDPSVVGVSLQMLRAINALDESENLTPLGFHLARLPVDPLTGRMLLMAAIFSCVGPILT
VAASLTFKDPFIIPLGKEKIVDEVKRRLNRGAKSDHLLVVTVYDNWERACQYGNERQYCR
DNFLSSAVLHQLKNFRKQFMSLLYEHKFVNTCNPRAGEVNRNSENLALVRAIITAGLYPN
VARVLPNSGRPSPHKPVRIRTAQEKRVALHPKSVNEKERKFEHPWLIYREKIKSSQVFIH
DSSMVPTYPLLFFGEKLNYDSSNGVINVDGFVRVRSSQHVAHLVQSLRNVLDQLLEHKIS
HPRMTRWEKFTKEGALLHTIVDLISSEKRITEEPQEYFEDQDDDDNDDN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtatggcagacagggtagaggaaactacagtgatggtggcttcagaggtgatggaggc
cgaggtaataaatatcgaaggagaggtggtgcaagaggaggtcgaagaggaggccatcca
caaggtcttcgtggcaaagaaattggtctttggtatgctcagaagtgtcgagaacgcaaa
gacaaggatgaatgctgtttaccagttatctctatgaatgctagtcaagttagagatgtt
ggtcgtatgctggactcttttgatgggggaagtaactcttcaggaaatgtctcaagtttt
gaaggtgcaagttcggtcctactggcaacggatgatttgggagaggagtgggacaatcgt
atatcatctattatggcacaggaatttgaagatgatggggacaaagaaaagaggcctctc
agtgaaacttttgctcggagattggagaatataaatgaatctgactttaagagagcatat
atggccaatgttcatggaaaccagctacgggactctgatggtctgggtgctttaaaagga
gaacagtttgggctgatacgaagagaagacttggatgaaaaactttataaggacatggta
gaacagcaaacttccaaactctatcaacagatgcttgaggttcgtaaaaagctgccttca
tacaagatgagagatgaaattgttgatgcaattcaaaaacaccaagtggtagtgcttagt
ggagaaacaggctgtggtaaaactacacaagttgctcaatttatattggaaaatgccatt
gccgatggcaaaggatctacctgccgtatagtttgtacacaaccaagacgtatttctgct
gtttccgttgcacagcgtgtggctgatgagcgtggagagaagctgggaaagagtgttggt
taccagatccgtttagaatctgtccttccacgttctgaaggctccatcttgttctgcaca
actggtattgtcctacagtggttgcaaggggacccagtcctatcacaggtgtcacacctt
gtcttagatgaaatacatgagagagacatgctctctgactttcttatctgtattgccaaa
gaccttattaaagtgcgaccagatctgaagatcgtattgatgagtgcaacactcaatgct
aagctgttttcagaatattatggaggttgcccaatgttacatataccaggctttaccttc
ccagtaaaagaatactatctagaagatgtactagaaattaccaggtttaaatttcaagat
gaaagaagaatacctatttggaaaagacgagaacataaagaaaataaagaatttgaagag
atgattgcaccttatataagaaacctagaacgaagtcagaaatactctagccaaactctt
gatgaactgtataagaagtctagtgaggagttaaacgtggagttgattctggagttgtta
cgttacattgctcagcaacctccaggtgctgtcctgatctttcttcctggatgggacaag
atctcaaaactacattcaatgatacaagaagacagaatgctaggtggacgtaattatctg
gtgattccattacactccatgatgccaacagctaaccagcgtgaggtgtttgacagacca
cctaaaggtgtgcgcaaaatagtcttggcaacaaatattgctgaaacaagtataacaata
gacgacattgtgtatgttgttgatggtgggtttattaaaatgaaaaattatgacaaggag
gctaatgtgacaactttgttacctcaatgggtcactcttgccaatgctaggcaacgtcga
ggtcgagcaggacgtgtgcaggcaggtatttgttaccatttgttcacacgtgctcgagaa
caagctctggatgagtatcccctgccagaaatccaaagaagtcgccttgaagagattatt
cttcacatcaaaatcttacgcttaggttcggtcaagcctttcttgcttgaagtgatgatg
cctcctgacccatctgttgttggtgtctctcttcagatgcttcgagcaattaatgcactg
gacgaaagtgaaaacttgacacctcttggtttccatttagcccgtcttcctgtagaccca
ctgactggtcgtatgctgctaatggctgccattttttcttgtgttggacccatcttgaca
gtggcagcatcattgacttttaaagatcctttcataattccattaggcaaagaaaaaata
gttgatgaagtgaagagaagactgaacagaggggctaagagtgaccatttattagtagtg
acagtttatgataattgggaacgtgcatgtcagtatggtaatgagagacaatactgcagg
gacaacttcctctcctctgctgtattacatcagctcaaaaactttaggaaacagttcatg
agcctgttgtatgaacacaagtttgtcaatacctgtaatccccgggcaggtgaagtcaac
cgtaattctgaaaatttagctctagtgcgagctatcatcactgcaggcctttaccctaat
gtagctcgagtcttgccaaacagtgggcgacctagtccccataaaccagtgaggattcga
acagcacaagaaaagcgagttgcattgcacccaaagtcagtgaatgagaaggaaaggaaa
tttgagcatccatggctgatatacagagaaaaaattaagtcatcacaggttttcatacac
gacagctccatggttccaacttatccccttctcttctttggggaaaaactaaactatgac
tctagtaatggagtgataaatgttgatggatttgtacgagttcgaagttcacagcacgta
gctcatttggtacagagtttacgaaatgttttagaccaacttcttgaacacaaaattagt
catccaagaatgacacggtgggaaaaattcaccaaggaaggtgcactgcttcacacaatt
gtggacctcatctccagcgagaaacgtataacggaggagccccaggaatatttcgaggac
caagatgatgatgataatgatgacaattaa
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