Cherax quadricarinatus (Australian red claw crayfish): 128687648
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Entry
128687648 CDS
T09502
Symbol
Helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128687648 (Helz)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
128687648 (Helz)
3'-5' decay
Other 3'-5' decay factors
128687648 (Helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
PAM2
UvrD-helicase
zf-CCCH
zf-C2H2_jaz
AAA_22
zf-C2H2_4
Helicase_RecD
MOV-10_Ig-like
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-GeneID:
128687648
NCBI-ProteinID:
XP_053631189
LinkDB
All DBs
Position
11:5041524..5173707
Genome browser
AA seq
1700 aa
AA seq
DB search
MEKSKKYHLDSTSDQAPNLANTSKQKWKKKKKENHREMQGIRQKSRSPKSDVENEMALEN
FEKSDKPISPNMKGHARKDKSPPARLHCSYCNVYFSTKVELQTHCRSQDHQTTIMSDEGR
DWTHRPPPRGLSADEYMLCATYKDTHTCRLGDQCIEAHSDAELVEWQERFEYRAMKLERA
REKQLHGASYADQLLERLSQTQHHDALLSEKSDGIITGISMEPNLRVSHKPSSHEWVISL
HTVTPLRVVSLLHDAHRTHFTISEVTRIDGHRHIHKSNEPENNQEWVNIDAEALIYQEPS
GYEYKVTISFRTMIYGTFRQAVIFDFGSEPVLMQRLCVDVIPVEDLSALLETKRTILTRS
ERWCEENVEIIPFDPKPHEFSEHDKSILAAYPAPTNENFVLTQTSMEKFPTKSNYQSRLH
DLLNIEELAQFDLVARFNIKTTLQITSSYLLLPSTAATAKYSRPGELFGKLEVSSEISED
SHHGRLVLSNCSTILVAPVVDKQEVRGKGTPNSSSLSSDSEKDVDGVGKEVKAKRRIYEV
LIEDKTKKEIYLRFSESAVSALRLSDDEEVTVEVQFQLNRLPLCEMHAALDRLPALDMIF
PDVTLEPAIPWNPINDVCGSYRQWGESLDAKLNPKQKEALVAITAPIGLVLPPILIIGPY
GTGKTYTLAQGIRQILQEPGSRILICTHSNSAADLYIKEYLHPYVLAGHEEARPLRIYYR
NRWVTTVHSDVQKYCLIENDQSVRRFVMPSEEEILYHRVIVATLNTSRYIASLKLEKGVF
THILIDEAAQAMECEALTPLALAKPDTRLVLAGDYMQLSPEVFSKFCEERGLGTSLLERL
YDLYPADSPCKIMLVENYRSHSAIIKYTSDLFYDGRLVASGKQTAHPKFHPLTFFTARGE
DFQDPNSTAFHNNSEVYEVCEQVGEIINHWPKREWGPVGEGSIGVVTPYADQMVRIRAEL
RKRKLYKINVERVLNVQGKQFRVIILSTVRTRHTCKAGDEGLDFGFLSNAKLLTTAITRA
QSLVAVVGDPVSLCSVGKCRKLWERFLQLCSEAGSLYGISWSALRAQLDGVELKKTYVLN
PLAPEFIPRYLYYSPLPPLPVVSAMPPYVSMYPPYIPTYPIHPVMGPQALPYIHQAPMPP
QWSPVHYSPASKTQIARPAPGRLGQPLIASHTLRPAVVTAAPATYIDPHGFDYSLHPGVV
SMYPYQPGSIPHRVPPVRRATELDPFNRGTYMPALPAPYQNLKQVPPPNILTQPPGIRCS
RFGRSLALPTAHIGRVTPQSEGEKSYQFLNNVHFPERQLSSNPSSLISRSICSRTETESP
LSTQSRESSHSSNSDGRAPTQAQTHQQILTSSSNQPHNELQSQLLSHIRQQPLLQVYSQS
NGNAGTEDSALPTPDVPDVVRIIDELIGDHSPTKTPGQWSAGESDTDCRVDPIQGMCRSS
LESWSGNSPCGMRAANSNIRHHATSPWSINSASVGKIVTVQELEASLHSRHQNQVHGANF
SGSVVSRAPGGPPFCTKETEKLIANREMEEPLIRERGDVPPPPGFSGLNRLVDPMAHLEL
REVNSAGYRTPSLPLYLRRGSRETLSSSVRNSPQNSQSVIGSNSISSSAPAMWHPSGDNL
NSSVSTHGEFGLRNISCSLGVSPSVALNAHNQDSKTYAGVLRSSLQPSSSDKGDDSNFSL
TDLTDKKMYASSNHLYQYFP
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatctaagaagtaccatttagattcaaccagtgaccaagcccctaatttagcg
aatacttcaaagcaaaagtggaagaaaaagaaaaaggaaaatcacagagagatgcaagga
attcggcaaaaatcaaggagtcctaaatctgatgtggaaaatgaaatggctttagaaaat
tttgaaaagagtgacaagcctatatcaccaaacatgaagggccatgcaaggaaagacaag
tctcctccagctcgtcttcactgctcttactgtaatgtctacttcagcaccaaggtggag
cttcagacccactgcagaagtcaggatcatcagaccactatcatgtcagatgaaggcaga
gactggactcaccgaccaccaccccggggactaagtgcagatgaatacatgctctgtgcc
acttacaaggacacacacacttgccgcttgggggaccagtgtatagaagctcacagtgat
gcagagcttgttgagtggcaggagcgttttgaatatcgggctatgaaacttgaacgagca
agggagaaacagctgcatggtgcttcctatgctgatcaacttctggagaggctttcacag
acacagcatcatgatgcactgctttctgaaaagagtgatggaatcataaccggcatcagt
atggaacctaacctgcgggtgtcacacaaacccagcagtcatgaatgggtcatcagcctg
cacactgtcacaccattgcgggtcgtctcgctacttcacgatgctcaccgaacacacttc
actatttctgaagtaactcgtattgatggccatcgccatatccataaatcgaatgaacct
gaaaataatcaggagtgggtgaatatagacgcagaggctttgatatatcaagagccatca
gggtacgaatacaaagttaccattagttttagaactatgatttatggaacatttaggcaa
gcagttatctttgactttggtagtgaaccagttctcatgcagcgattgtgtgtggatgtt
attcctgttgaggatctcagtgctcttttggaaaccaaacgtacaatacttaccagaagc
gaaagatggtgtgaagagaatgtggaaataattccttttgatcctaaacctcatgaattt
agtgagcatgacaaatcaatactggctgcatacccggctcctacaaatgaaaactttgtt
ttaactcagacttcaatggaaaaattccctacaaaaagcaactaccaaagcaggttacac
gatcttttaaacattgaggagttggcccagttcgacttagttgccaggtttaatatcaag
accactctacaaattacaagtagttatttgcttttgccttcgactgccgctactgcaaaa
tattctcgaccaggtgaactgtttggaaaactagaagtttcttcagaaatctcagaagat
tctcatcatggacggttagtgctgtcgaattgtagcaccatccttgtggctcctgttgta
gataagcaagaagttcggggtaaaggaacaccaaacagttcatcattatcatcagactct
gagaaagatgttgatggtgtgggtaaggaggttaaagctaaacgtcgaatttacgaagta
cttattgaagacaaaacaaaaaaggagatatacctgcggttttctgaatctgctgtttct
gccctccgtctaagtgatgatgaagaagtgacagtggaagttcagtttcagttgaaccgt
ctaccactctgtgaaatgcatgcagcacttgaccgtctcccagctttagacatgattttt
ccagatgtcactctagaacctgcaattccatggaacccaatcaatgatgtgtgtggttcc
tacaggcagtggggcgagagtctggatgccaagttgaatcccaagcagaaggaagctctt
gttgcaattactgcaccaattggacttgtccttcctcctatactcatcataggtccttat
gggacagggaagacctacacactggcacaaggtatcagacaaattctacaggagccaggg
tcacgcatcctcatctgtactcattccaacagtgctgctgatttatacatcaaagaatat
ctccacccatacgtcttagcaggacacgaggaagctagacctttacgcatttattaccgc
aatcgctgggttacaactgttcattctgacgttcagaagtattgtttgatagaaaatgac
cagagtgttaggaggtttgtgatgcccagtgaagaagaaattctctaccatcgagttata
gttgcaactctcaacacttcccgttacattgcatcactcaagctggagaaaggtgtattt
acgcacattctaatagacgaagcggcccaggctatggagtgtgaggctctgacaccatta
gccctagccaaacctgatactcgccttgtattggctggagattacatgcaactcagtcca
gaggttttctctaaattttgtgaagaaagaggcttaggcacatctctactagagcgactg
tatgatctttatcctgcagactccccatgcaaaattatgcttgtagaaaattaccgctcg
cactctgccattattaagtatacatctgacttgttctatgatggtcgactagtagcaagt
gggaagcagactgctcaccccaagttccatccccttaccttctttacagctagaggagaa
gattttcaagatcctaattccactgcttttcacaataattcagaggtttatgaagtgtgt
gagcaagtgggagaaatcatcaatcattggccaaagagagagtggggtccagttggtgaa
gggtccattggggttgtgacaccttatgctgatcaaatggttcgcattagagctgagttg
aggaagcgcaaactgtacaaaattaacgtggaaagagttcttaatgtacaagggaagcag
ttccgagtgatcatcttatcaactgtgcgtacacgtcacacttgtaaggcaggagatgag
ggattagattttgggttcctctcaaatgccaagttattaaccactgccatcactcgagcc
cagagtcttgttgctgttgttggagatccagtttcactctgttctgttggaaaatgcagg
aaactttgggagagatttctacaattatgctcagaggctggatcactgtatggaatatcc
tggtctgctttacgagcacagctggatggcgtcgaacttaagaagacttatgtgttaaac
ccactagctcctgaatttattcctcgttatctttattattctcctctaccacctttgcca
gtagtatcagcaatgccgccatatgtgagtatgtatcctccatacatacccacataccct
atacatcctgtgatgggacctcaggcattgccttatattcaccaagctcctatgcctcct
cagtggtctccagtgcactatagtcctgcttctaagacacaaatagctagacctgcgcct
ggtagacttggccaacctctcattgcgtctcacaccttacgtccagcagtagtcacagca
gcacctgcaacctacatagatcctcatgggtttgattattcattacatcctggagttgtt
tcaatgtatccctatcagcctggcagtattcctcaccgtgtgccgccagtgcgacgagct
actgaactagaccctttcaaccgtggcacgtacatgccggcacttccagctccctatcaa
aatttaaaacaagtacctcctcccaatatattaacacagcctcctggaatacgatgctct
cgctttggtcgttcattagctcttcctacagctcatattggtagggtaacaccacagagt
gaaggagaaaagtcgtatcagttcttgaacaatgttcattttccagaacgccaactatct
tctaatccatcatctctcatctctcggtcgatatgctctcgaactgagactgaatcacca
ctgtcgacacaatctagagagagttctcactcgagcaacagtgatgggcgagcccctaca
caggcacagacccatcaacaaattctgaccagttcatcaaatcagccacacaatgaactt
cagtctcagctgctatcacatatacgacagcagccactacttcaggtatattcacaatcc
aatggtaatgctggtaccgaagattcagctctcccaactcctgatgttccagatgttgta
cgaatcattgatgagctcatcggggatcactctcccactaagactccaggtcagtggagt
gcaggtgaatcagacacagactgcagagtagatcctattcaaggtatgtgccgctcatct
ttagagtcttggtcaggaaattccccttgtggcatgagagcagcaaattcaaatattcgt
catcatgccacaagcccctggtcaataaactctgctagtgtaggaaaaatagtgacagtt
caagaattagaagcctctttacacagcaggcatcaaaaccaggttcatggagcaaacttt
tcaggttctgtggtatccagggcaccaggaggaccaccattttgtactaaagagaccgaa
aaattaattgccaatagagaaatggaggaaccacttataagggaaaggggggacgttcct
ccgcctcctggattcagtggattaaataggttagtggatcccatggcacacttagaactt
agagaagttaattcagctggttatcgaacgcctagcctcccactatatctaagacgtggt
agccgagaaactttgtctagtagtgttcgaaattcaccacagaattcgcaatctgttata
ggaagcaatagcatcagtagctcagctccagctatgtggcatcccagtggtgataattta
aattcctctgtatctacacatggagaatttggtcttagaaatatttcgtgttctcttggg
gtatctccatcagttgcacttaatgcacacaaccaagacagtaaaacatatgctggtgtt
ctacgttcttcgcttcagccgtcatcttcagataaaggagatgactcaaatttttctctt
acggatttaacagataaaaaaatgtatgcatcaagtaatcatctttaccagtattttcca
taa
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integrated database retrieval system
