Cherax quadricarinatus (Australian red claw crayfish): 128688003
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Entry
128688003 CDS
T09502
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cqd03000
]
128688003
03036 Chromosome and associated proteins [BR:
cqd03036
]
128688003
Transcription factors [BR:
cqd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128688003
Chromosome and associated proteins [BR:
cqd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128688003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_11
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
128688003
NCBI-ProteinID:
XP_069939826
LinkDB
All DBs
Position
10:26797711..27047726
Genome browser
AA seq
691 aa
AA seq
DB search
MMEGSQGGETISDIHNYLDTFNKEIQTGDQAHPGEVAQVFVDESGQYFYQNVDGSQQQMV
VVSSDGTDGSEGETGGADDSVMLNAEEDSLNDDGDSLSQGQVALGEDGTLQVIPSMEQGD
GNNQVVLNTGDNNQIVTIVPSSTNSGEVSYVLIVEQSGDADKDDTVYDFNEADEGLSYES
GEEDDKKMMRIIHKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGF
KTLASLQNHVNTHTGIKPHRCKFCESTFTTSGELVRHVRYIHTHEKPHKCPDCDYASVEL
SKLKRHMRCHSGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECEICHARFTQSNSLK
AHKLIHTDVASGNKPVYACELCPTTCGRKTDLRIHVQKLHTSDKPLKCKKCGKAFPDRYT
FKQHNKSHEGEKCFKCDLCPYASASARHLESHMLVHTEQKPYQCDQCDQAFRQKQLLKRH
QNLYHNPEYIPPMPREKTQECPECGKTFRHKGNLIRHMAIHDPDASAQEKAQALKIGRQK
RLQIINGQQVEMYTGDVDDDEIMAVEGQDGNQYVVLEVIQLQDGEGHVMMSDGIPVTDGT
LDGTGVGGVLGSSPLMVPETITGDTITGDTIGSVDGTCLVSESSLLELQHKKTEIKTEIS
AEAKKEAKKEMETCFGFDDEDEGQIHLEFGE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagggagccaaggtggggagacaataagtgacatacataactatcttgacaca
tttaataaagagatccaaactggggatcaagcacatccaggtgaagtagctcaagttttt
gtagacgagtctggtcagtacttttaccaaaatgtggatggcagtcagcagcagatggtt
gttgtttcatctgatggaacagatggatcagagggggaaacaggtggtgcagatgactcg
gttatgttgaatgcagaggaggattctctcaatgatgatggagacagtctgtcacaaggg
caggtggcgctgggtgaggatggcacattacaggtcatacccagcatggaacagggtgat
ggcaataatcaggtggttcttaatactggagacaataatcaaatagtaactattgttcct
tcatcaacaaattctggtgaagttagttacgttttgattgtcgaacagtcgggtgatgct
gacaaagatgatactgtatatgattttaatgaagcagatgaaggccttagctatgaatcg
ggtgaagaagatgataaaaaaatgatgcgtattattcataaaaaatcgcaaaccgttaca
caagcccacatgtgcaattattgtaattataccagtcctaaaagatacttactttcaaga
catatgaagtctcacagtgaggagcggccacataaatgttctgtctgtgaaagaggattc
aaaactttagcatcgcttcaaaatcatgtaaacacacacacgggcattaaacctcaccga
tgcaagttttgtgaaagcacttttacaacgtctggggaacttgttcggcacgttcgttat
attcacactcatgagaagccacacaaatgtcctgactgtgattatgccagcgtagaactt
agcaagttaaagcgtcacatgcgttgtcattctggagagagaccatatcagtgtccgcac
tgtacttatgccagtcctgacacattcaaactgaagagacacttaagaattcacacagga
gaaaaaccatatgagtgtgagatctgtcatgctcgttttactcagtcaaattctttgaag
gcccacaagttgatacatacagatgttgcatcagggaacaagccggtatatgcctgtgag
ctatgcccaacgacgtgcggccgaaagactgacctcagaatacacgtgcagaagctccat
acctcggacaaacccttgaaatgcaaaaaatgtggcaaagccttcccagataggtacaca
ttcaaacaacacaataagtctcatgaaggggaaaagtgtttcaagtgtgatttgtgtcct
tatgcctcagcttctgcaagacatctagagtcccatatgcttgttcatacagaacagaaa
ccttaccaatgtgatcagtgtgaccaggcattccgtcagaaacagttgctgaaaaggcac
caaaacttataccataatccagaatacatcccacccatgcccagagaaaaaacacaagag
tgcccagaatgtggcaagacatttaggcataaaggtaacctcattagacatatggctatc
catgatcctgatgcttcagcacaagaaaaggcacaagcactcaagattggaagacagaaa
agattacaaattataaatggtcaacaggttgagatgtatactggtgatgttgatgatgat
gagattatggctgtagagggacaggatggaaaccagtatgttgttctagaggttatacag
cttcaggatggtgagggccatgtcatgatgtctgacggcatccctgtaactgatggcact
cttgatggcacgggagttggtggtgttttggggtcttcacctctaatggtcccagaaaca
ataactggagatacaattactggtgatactataggctcagtagatggcacctgtttagtt
tcagaatcttcactcttggaactgcagcacaagaaaacggaaataaagactgaaatcagt
gcagaggccaagaaggaggccaagaaagaaatggaaacatgctttggctttgatgatgag
gatgaagggcagattcacttagaatttggagaatga
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