Cherax quadricarinatus (Australian red claw crayfish): 128688051
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Entry
128688051 CDS
T09502
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128688051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqd03036
]
128688051
Chromosome and associated proteins [BR:
cqd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
128688051
REST complex
128688051
Heterochromatin formation proteins
Other heterochromatin formation proteins
128688051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
Motif
Other DBs
NCBI-GeneID:
128688051
NCBI-ProteinID:
XP_069939930
LinkDB
All DBs
Position
10:42016067..42239269
Genome browser
AA seq
1372 aa
AA seq
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MPREATAWLTRQASDKPCPRPGSRSRRTLKTHERCHRECFEHLQLSHFCFQVSVSVPGQQ
TTVVHTPQGVHHHITSTHHPPPPPPPPTVTLKPSHHPPPPRSTLPASVTQHTSPSLVGTH
NVHTGTGGGTGPGSGVSGGTTVGGGGGGGGGGSSGGGGGCGGAGGVTGSNTSTSTGGGTP
SVTQVASSVSVGSNTSTGTNSGSNTSATSNTAGSTQHSTNTAPQHPSREPQPPPPHQHHH
HHHQPPAQPVEFNHAINYVNKIKLRFQGQPDIYKQFLEILHTYQKEQRHIKDGGSIPTRT
LTETEVYEKVAKLFENQEDLLQEFGQFLPDATNNSAAQAAVSDFMDQYRTHHGGNKTVSN
DHTTVKKTNIKSSCGLGSGNNLVSGPGNVPNKTSPMFGHQLKRPHSGPTQGHTHSHAQPP
VKKPKLGYLKDMSAAEAGKYATLAEYAFFDKVRKALRHEETYHNFLRCITLYNEEIITRS
ELVQLVHPFLAKFPDLLKWFKEFVGYREGALGSSDIIPSSVAKQERISGDLAMEIDYTTC
KRLGASYCALPKSYPQPKCSGRTSLCKEVLNDTWVSFPSWSEDSTFVTSRKTQYEEYIYR
CEDERFELDVVLETNLATMRVLEGVHKKLQRMSPEEAARFRLDDCLGGNSPTIHQRAIRR
IYGDKAPDIIDGLKKNPVVAVPLVLRRLKAKDEECGSMKGFNKIXEEQNEKYYLKSLDHQ
GITFXQTDVKTIRVKXFLNDIETLFDERHEQAEESGEVITGPHMVLHYPDKSIIDDASNL
VIHHVKRQTTYHKDDKVKIKQIVRHFIPDLLFHTRQEMSDDEKDMEEEEEDEDDGKSEGK
CEGGGRRDLRGRECKQTSSTPCATNNNSNKRKTRNRGIEPEKDGDVKCGRENSGNNNNNN
NNNNNNNKTKDDNKNKVALNGDATEDEKISIKTEVDDEKMEVKEEPGTVGNGNVQPDDEY
RLFMCNNNWYLFLRLHQILCCRLTTMYEHAVRIAAEEAKDKKDRKEATAVALRLKPKNEI
AIEDYYPAMLDMVKNVLDGNLESTAYEDTLREMFGIHAYTGFTMDKVVTGAVRQLQHVVS
DDPPVQCTAMYLSEAKKGGAGGPIASAHRRLPAEHLYQKRSERLLQDENCFKIYTYKRNC
KMTIELIDTEIEEGEDSGGSAGTGISHNGTVPSSSHSTIPPAVSEVERWSEYVEKYVSSV
APQMSPAMQAQLSRKPVFLPRNLRSWRKLTASRQSNQEVEKGGCTEDVKPPVCPVMDITD
NTQCKFNLSSFKMVFVVNSDSYMYKKQALKRAKQSHEHVSRRMRSGLLSWHGNWCTRNVS
EADQRAAMDWFLGHTDGLRPNCTRIVRIDDPSRPPFAPYNKYKCELEESGGS
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atgccacgagaagcgacagcttggttgaccaggcaagcatcagacaagccttgtccaaga
ccaggctctaggagtagaagaactctgaaaactcatgaaaggtgccatagagaatgtttt
gagcatttacagttgtcccatttctgttttcaggtgagcgtaagtgtgccaggacagcag
acaacagtagttcacacacctcagggggttcatcaccacatcacctctacacaccatcct
ccaccaccaccaccaccgcccacggttactctcaagccctctcatcatcccccacctcct
agatccacattgcctgctagtgtgacacaacatactagtcctagtttagttggcactcac
aatgtccatactgggactggaggtggcacagggcctgggagtggagtcagtggtggaaca
actgtgggaggtggtggtggtggtggtgggggaggcagcagtggtgggggtgggggttgt
ggtggtgctgggggtgttactggcagtaacactagtactagtactggaggaggaactcca
agtgtcactcaggtagcaagcagtgttagtgttggtagcaacacgtccaccggcactaac
tctggtagcaacacaagtgccacaagtaatactgcagggagtacacagcactctaccaac
actgctccccagcaccctagtcgtgaaccccagccaccccctccacaccagcatcaccac
caccaccaccagcctccagcacaacctgtggagttcaaccatgccatcaattatgttaat
aaaattaagttacggtttcaaggtcaaccagacatttacaagcagttcctagaaatcctt
cacacataccagaaagagcaacgacacatcaaggatggtggatccatacctactagaacg
cttactgaaactgaggtgtatgagaaggttgctaagctatttgaaaaccaagaagatttg
ttgcaagagtttggtcagttcctccctgatgccacaaacaattctgcagcccaggctgca
gtttctgactttatggaccagtatcgcactcaccatgggggcaataagacagtaagcaat
gatcacacaacagtgaagaagaccaatataaaaagtagctgtgggttgggttcaggtaat
aacctggtgagtgggcctggtaatgtgccaaataaaacctcgcccatgttcggccatcag
ctaaagcgtccacactcaggcccaactcagggccacacccactctcatgcccaaccacct
gtgaagaaaccaaagctagggtacctgaaggatatgagtgctgccgaagccggcaagtac
gcaactctagcagaatatgccttcttcgataaggttcggaaagctttacgtcatgaagaa
acctaccacaatttcctaagatgtatcacattgtataatgaagaaataattacccgttct
gagttggttcaactagtccatccctttctcgccaagttccccgatcttcttaagtggttt
aaggagtttgtggggtatcgtgaaggagcattgggcagctcagatataattccttcatca
gttgcgaagcaagagagaattagtggtgatttggctatggaaatagattatacaacatgc
aagagactaggtgcatcttactgtgctctgcccaaatcctacccacaacccaagtgctct
ggccgaaccagtctctgtaaagaggttctcaatgatacctgggtgtcttttccttcttgg
tcagaggattccacttttgtcacttcccgtaaaacgcaatacgaagaatatatatatcga
tgtgaagatgaaagatttgagctggatgtggtactggagacaaatttggcaacaatgcgt
gtgttagaaggtgtacacaaaaaactccagaggatgagtccagaggaagcagctagattt
agattagacgactgtctaggaggaaactcgcctacaatacaccaaagggctattcgaaga
atatatggtgataaagctccagatattatagatggattaaaaaagaacccagttgttgca
gtgcctttggttctgagaaggttaaaagcaaaggatgaggaatgcggaagcatgaaaggt
tttaacaaaatatgagaagagcagaatgaaaaatattacctaaaatccctggaccatcag
ggtattacatttnnacaaactgatgttaaaacgatacgagtaaaanngtttctgaatgac
attgaaactttatttgatgagcgtcatgagcaagctgaagagtctggtgaagttattact
ggccctcatatggtacttcattatcctgataaatctataatagatgatgcatcaaactta
gtaatccaccatgtcaagagacaaacaacataccataaagatgacaaggtcaaaatcaag
cagattgtcagacattttattcctgaccttctctttcacacaagacaagaaatgtctgat
gatgagaaagatatggaagaagaggaagaggatgaagatgatggcaagagtgaaggaaag
tgtgaaggtggtggtcggagggatctgagaggacgtgaatgcaagcaaacttcatctacc
ccttgtgccactaataataattccaataagcgaaaaactagaaatagaggtattgaacca
gagaaagatggtgatgtgaaatgtgggagagaaaatagtgggaacaataataataataat
aataataataacaataataataaaaccaaagatgataataaaaataaagttgcactcaat
ggtgatgcaactgaagatgaaaaaattagtataaagactgaagttgatgatgaaaaaatg
gaagtgaaagaagagcctggaactgttgggaatggcaatgttcagccggatgatgaatac
agattattcatgtgtaacaacaattggtacctttttcttcggttacatcaaattttatgt
tgtcgtctcactaccatgtatgaacatgctgtccgaatagctgccgaggaggccaaggat
aaaaaggataggaaagaagcgacagcagttgcccttagactcaaacctaaaaatgaaata
gctattgaagactattacccagccatgttagatatggtgaagaatgttctggatggcaat
ttggaatccacagcatacgaagatacattacgagaaatgtttggcatccatgcttacact
ggtttcacaatggataaggtagtaactggggcagtgagacaacttcagcatgtagtgagt
gatgaccctccagttcagtgcacggccatgtacctgtcagaagccaagaaaggaggtgcg
ggggggcctatagcctctgcacaccgacgcttacctgctgaacatttataccagaaaagg
tctgaacgccttctccaagatgaaaattgcttcaaaatttatacatataaaaggaactgt
aaaatgactatagaattgatagacacagagattgaggagggagaagatagtggaggaagt
gctggaactggaattagtcacaatggtacagttccttcctcttctcattcaaccattcca
cctgccgtcagtgaagttgaaagatggagtgaatacgtagaaaaatatgtctcatccgtc
gcacctcagatgtcacctgctatgcaggcccagctgtccagaaagccagtatttttgcca
cgcaaccttcgctcttggagaaagttaactgcatccagacaatccaatcaggaagttgaa
aagggtggatgtacagaagatgtcaagccaccagtgtgtcctgtaatggacattaccgac
aacactcaatgcaaatttaacctgtcctcattcaagatggtttttgtagttaatagtgat
tcatatatgtacaagaaacaggctctcaagcgggccaaacaaagccatgagcacgtgagt
cgaaggatgcgcagtggcttattgtcatggcatggtaattggtgcacaagaaatgtgtct
gaagcagatcagcgagctgcgatggactggtttttaggacatacagatggcttacggccg
aactgtacaagaatagtgcgtattgatgacccttcccgaccaccttttgcaccctataac
aagtacaagtgtgaactagaagaaagtggagggtcctaa
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integrated database retrieval system
