Cherax quadricarinatus (Australian red claw crayfish): 128688671
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Entry
128688671 CDS
T09502
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03013
Nucleocytoplasmic transport
cqd03015
mRNA surveillance pathway
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128688671 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
128688671 (Hel25E)
03015 mRNA surveillance pathway
128688671 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128688671 (Hel25E)
03041 Spliceosome [BR:
cqd03041
]
128688671 (Hel25E)
Enzymes [BR:
cqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128688671 (Hel25E)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128688671 (Hel25E)
Spliceosome [BR:
cqd03041
]
Complex C
Other components
EJC/TREX
128688671 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128688671 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
128688671
NCBI-ProteinID:
XP_053632598
LinkDB
All DBs
Position
13:3434901..3481467
Genome browser
AA seq
427 aa
AA seq
DB search
MADQETDLLDYEEDEEPVEPAAGETNEAPPVKKDVKGTYVSIHSSGFRDFLLKPEILRSI
VDCGFEHPSEVQHECIPQAVLGMDILGQAKSGMGKTAVFVLATLQQIDPVDGQVSVLVMC
HTRELAYQIAKEYERFSKYMPTVKVGVFFGGLNIQKDEETLKSNCPHIVVGTPGRVLALV
RNKKLNLRNLKHFVLDECDKMLEQLDMRRDVQEIFRNTPHEKQVMMFSATLSKDIRPVCK
KFMQDPMEVYVDDEAKLTLNGLQQHYVKIKENEKNRKLFELLDALEFNQVVIFVKSVQRC
MALSQLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVF
NYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSEESDAKTLNEVQERFDVNITELPDEIDL
SSYIEGR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaagagactgatcttctagattatgaagaggacgaagaaccagtggagcca
gcagcaggagagaccaatgaagctcccccagttaagaaagatgttaagggtacatacgta
tcgattcactcctcggggtttcgggacttcctactcaagccagagattttacgatccatt
gtagactgtggttttgaacatccatctgaagtgcagcatgagtgcattcctcaagctgtg
ctgggaatggatatccttgggcaggctaagtctggaatgggcaagacagcagtgtttgta
ttggcaactctgcaacagattgacccagttgatggccaggtgtctgtgctggtaatgtgt
cacactcgtgaattggcatatcaaattgccaaggagtacgaacggttcagcaagtacatg
cccactgtcaaggttggagtgttttttggaggcttgaatattcaaaaggatgaagaaacg
ctgaagagtaattgtcctcatattgtcgttggtacaccgggtcgtgttcttgctctggtc
cgcaataagaagcttaatctgcgcaatctcaaacatttcgtcttggatgaatgcgacaag
atgcttgaacaactagatatgcgtcgtgatgttcaagaaatcttccgcaacactcctcac
gagaagcaagtcatgatgttcagcgccacattgagcaaggatattcgtccagtttgcaag
aaatttatgcaggatcctatggaggtttatgttgatgatgaagcaaagttaactctaaat
ggtctgcagcagcattatgtcaagattaaggagaatgaaaagaacaggaaactgtttgaa
ttgcttgatgctttagaatttaaccaggttgtgatatttgtgaagtctgtgcagcgatgt
atggcattgtcgcagctgttagtggaacagaacttcccagccattgctatacaccgtgct
atgacccaggaggagaggcttagtcgttaccagcagttcaaagatttccagaagcgtatt
cttgtagccacaaatctctttggccgaggaatggacattgaaagagttaacatagtcttc
aattatgatatgccagaagacagcgatacatatcttcacagagtggcaagagctggaaga
tttggtaccaaaggtttggcagtaacctttgtcagtgaagaaagtgatgcaaagaccctt
aatgaagttcaggaacgatttgatgttaacatcacagaactacctgatgaaattgatctc
tcttcatatattgagggacgctag
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