Cherax quadricarinatus (Australian red claw crayfish): 128688674
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Entry
128688674 CDS
T09502
Symbol
Shmt
Name
(RefSeq) serine hydroxymethyltransferase isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd00260
Glycine, serine and threonine metabolism
cqd00630
Glyoxylate and dicarboxylate metabolism
cqd00670
One carbon pool by folate
cqd01100
Metabolic pathways
cqd01200
Carbon metabolism
cqd01230
Biosynthesis of amino acids
cqd01240
Biosynthesis of cofactors
cqd04981
Folate transport and metabolism
Module
cqd_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128688674 (Shmt)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128688674 (Shmt)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128688674 (Shmt)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128688674 (Shmt)
Enzymes [BR:
cqd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128688674 (Shmt)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
128688674
NCBI-ProteinID:
XP_053632607
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Position
13:4200153..4243063
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AA seq
494 aa
AA seq
DB search
MNAESQSEHPLCRPLAEDDPQLFEILRKEKNRQFRGLEMIASENFTSRAVNECLSSCLTN
KYSEGMVGQRYYGGNEFIDEVELLCQQRALKAFGLKPEEWGVNVQPYSGSPANFAVYTAL
VEPHGRIMGLDLPDGGHLTHGFYTAAKKVSATSIFFESMPYKINVNTELIDYDRLQENAK
LFKPKLIIAGVSCYPRHLDYKRFREICDENGSLLMADMSHVSGLVATGLTTNPFEYCDIV
TTTTHKTLRGPRSGVIFYRRGQKGVDKNGKAVMYDYEDKINQAVFPGLQGGPHNHQIAAI
AVTMRQAAEPSFKEYQEQVIKNANELATGLQTAGYKIVTGGTDNHLVWVDMRSVGLSGGK
AEKILEDVSIACNKNTVPGDKSALNPSGIRLGTPALTTRNMKEENIKVVVSFITEAFRIA
RDVQEKSGPKLVDFKRVLNDEEFKNRVVVLREKSWVKCQLRDIQHPREWEALKFDPSKGR
LAGIKASYLRGPTP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagaaagtcagagtgagcaccccttgtgtcgacccctggcagaggatgaccca
caactcttcgaaattctcaggaaagagaagaatcgacagtttcgtggtcttgaaatgatt
gcctctgaaaattttacatctcgtgcagttaatgaatgtttgtcatcttgcttaacaaac
aagtactctgagggtatggtgggccagaggtattatggtggaaacgagtttatagatgaa
gtagaattactgtgtcagcagcgtgccctgaaggcatttggactgaaacctgaagaatgg
ggtgtcaatgttcagccatattctggctccccagccaactttgctgtctacacagctcta
gttgagcctcatggacgtataatgggtttggatcttcctgatggagggcatctaacacat
ggcttctacacggccgctaaaaaggtgtctgctacgtcaatattcttcgagtcgatgcct
tacaagatcaatgttaacacagaactgatagattatgacagactgcaagaaaatgctaag
cttttcaagccaaagcttataattgcaggtgtcagctgttatcctcgtcacctggattat
aaaaggttccgggagatctgtgatgaaaatggctcccttctgatggcagacatgtcacat
gtaagtggtcttgtagccacaggcctcactacaaaccccttcgaatattgtgatatagtc
actacaacaacacacaagacacttcgtggacctcgtagtggtgttatcttttatagaaga
ggacagaagggtgtggataaaaatggaaaagcagttatgtatgactatgaagacaagatc
aatcaggcagtgtttccagggcttcaaggaggaccccataatcatcagattgctgctatt
gctgttaccatgagacaggctgctgaaccttcatttaaagaatatcaagaacaggtcata
aaaaatgcaaatgagcttgctacaggcttgcaaactgctggctacaagatagttacagga
ggaactgacaaccacttagtgtgggttgatatgcgttcggtgggattatctggtggtaaa
gctgaaaaaatattggaagatgtatccatagcttgcaacaagaacacagttcctggtgac
aagtctgcattgaatccaagtggcattcgtttgggaactccagctctcactacaaggaac
atgaaggaagaaaatataaaggtggttgtatcattcatcactgaagccttcaggattgca
agagacgtgcaagaaaaatctggaccgaagttagtggacttcaagcgtgttttgaatgac
gaggagttcaagaatcgtgtggttgtgcttagggaaaagtcatgggtgaagtgccagctc
agggacatacagcacccaagggaatgggaagctttaaagtttgatccaagtaagggaaga
ctggctggcatcaaggcatcttacttgaggggtcctaccccttaa
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