Cherax quadricarinatus (Australian red claw crayfish): 128688689
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Entry
128688689 CDS
T09502
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8 isoform X1
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03018
RNA degradation
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128688689
09123 Folding, sorting and degradation
03018 RNA degradation
128688689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128688689
03041 Spliceosome [BR:
cqd03041
]
128688689
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128688689
mRNA degradation factors
5'-3' decay
Lsm complex
128688689
Spliceosome [BR:
cqd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128688689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
128688689
NCBI-ProteinID:
XP_053632639
LinkDB
All DBs
Position
13:complement(20871124..20894715)
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AA seq
96 aa
AA seq
DB search
MTNALESYVNHLVSVITADGRNIVGTLKGFDQTVNLIMDECHERVYSSHRGVEQVILGLY
VVRGDNVALIGEVDEDLDSRLDLENIRAEPLNECKT
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcactcgagagttacgtcaatcatcttgtctctgttataacagctgatggg
aggaatattgtgggaacattgaaaggctttgatcaaactgtgaacctgatcatggacgag
tgtcacgagcgggtctacagttctcatcgaggtgtcgagcaagttattctggggctttat
gtcgtcagaggtgataatgtagctctcattggagaagttgatgaagacttggattcaaga
ctagatcttgaaaatattcgagcagaacctctgaatgagtgtaaaacttga
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