Cherax quadricarinatus (Australian red claw crayfish): 128691201
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Entry
128691201 CDS
T09502
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128691201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqd03041
]
128691201
Spliceosome [BR:
cqd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
128691201
Complex C
U5 SnRNP specific factors
128691201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Ge1_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
eIF2A
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
WD_LRWD1
Nbas_N
DUF5888
TibC_1st
PQQ_2
Phage_min_tail
WDCP
Motif
Other DBs
NCBI-GeneID:
128691201
NCBI-ProteinID:
XP_069945141
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All DBs
Position
27:complement(16521196..16566062)
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AA seq
346 aa
AA seq
DB search
MDGKRKAEYLTVAVQAKKPRHEMVIHSGDKGSLVQSGPPRTSGLMSPIMQLSGHQGDILC
GKFHPEGEVVATAGMDRQILFWNVYGDCDNFGMLTGHTNAITDMHFSTDGTVLYTASADK
TVMCWDTTSGTRVKKLKGHSSFVNCVHSARRGPSLVVSGGDDCTVLIWDVRKKRPATTLQ
NTFQVTAVTFNDTSEQVISGGIDNDMKVWDLRKNGLLYRMRGHNDTVTGLSLSPDGSYVL
SNAMDNTVRIWDVRPFAPQERCVKIFQGHQHNFENILLRCSWSPDGRRVAAGSSDRHAYI
WDTTTRHILYKLPGHNGSVNTVEFHPKEPIIMSVSNDKQIFIGEIE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaagcggaaagcagaatacttaaccgtggctgtccaggccaagaaacctaga
catgaaatggtcatacactccggagataaagggagtctcgttcaaagtggacctccaaga
actagtggacttatgtctcccatcatgcagctttctggccaccagggagacattttgtgt
ggtaaattccatcctgaaggagaggttgttgctactgctggcatggacaggcaaatactt
ttttggaatgtgtatggagactgtgataattttggaatgctgacgggccacacaaatgcc
atcacagatatgcatttctctactgatggaacagttctgtacacagcatcagcagacaaa
acagtcatgtgctgggatactactagtggcacacgagttaagaagctgaaaggacacagc
agttttgttaattgtgtgcatagtgcacgacgtggtccaagtcttgttgtgagtggtgga
gatgactgtactgtcttaatctgggatgtgcgaaaaaaacgacctgctacaacacttcag
aacacattccaggtaacagctgtgactttcaatgacacatcagagcaagtcatctctgga
ggtattgataatgatatgaaggtgtgggatttgcggaaaaatggtttgctataccggatg
cgtggacataatgatactgtgactgggctcagtctttctccagatggctcttatgttctt
tctaatgccatggacaatactgtcagaatatgggatgtacggccatttgctccacaggaa
cgctgtgtcaagatctttcaagggcaccagcacaactttgaaaatatcttactacgctgt
tcttggtcacctgatggacgtcgtgtggcagctggatcctctgatcgccatgcttacata
tgggataccactaccaggcatatactttacaagctaccaggacacaatggatcagttaat
actgtcgaatttcatcccaaagaaccaataattatgtctgtatcaaatgacaaacagatc
ttcataggagaaattgaatag
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integrated database retrieval system
