Cherax quadricarinatus (Australian red claw crayfish): 128691389
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Entry
128691389 CDS
T09502
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128691389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqd03041
]
128691389
Spliceosome [BR:
cqd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
128691389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_SPT8
Ge1_WD40
Beta-prop_IP5PC_F
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
128691389
NCBI-ProteinID:
XP_053636215
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Position
36:23745968..23757489
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AA seq
509 aa
AA seq
DB search
MSEGEDSPVTVGGGGVSERQWYVSNLESTVSGGDTPTDSPGSPANTTNIHTSNEYMELDE
PEMLDEKKALLEEFERKRRARMIHVTTDDSEVKQQLRQLGEPICLFGEGPADRRNRLKEI
LSRLGEDALKKTGAGQQEADTPEHDQQRPEETWYHEGPQSLKEARMFIVNYSIPHARARL
KKEHLDYQVPEATRTARRQEVQNKLRSFGLLGSQNADTRPVCYCSFSPNGKLLATSSWSG
LVKLWKVHNCLEERTFRGHNCYVDCVEWHPSATLSMEPTALNLVSSGRDGSVQLWSLNGE
EPLGELPTLEARVSRVRFHPSGRFLGACVHDNSWRLWDLEIQEEVLFQEGHSKPVYCLAF
QNDGSLCATGGMDASGRIWDLRTGRCVMFLSGHQNPVLAIDWSPDGYHLVTGSEDNTARV
WDVRQRRCIYIIPAHTGIVTGARYDRLGGQYIVTCSYDGSVRLWCHGSFQAMRALEGHGQ
KVMGVDVSPTDGIIATCSFDRTFKIWGPD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggtgaagattctcctgtgacagtgggaggcggaggagttagtgagcgtcaa
tggtatgtctcaaatttggagagcactgtgtcgggtggagacaccccgacagattctcct
ggaagtccagcaaatacaacaaatattcataccagcaatgaatacatggagttggatgag
ccagagatgttggatgagaaaaaagcacttttggaagaatttgaacgcaaacgtcgagct
cgaatgattcatgtaacaacagatgatagtgaggtaaagcagcagttgagacaactgggt
gaacctatctgcttgtttggtgaaggccctgctgatagaaggaaccgcttgaaagaaatt
ttgtctcgacttggtgaagatgctctaaaaaagacaggtgctgggcaacaagaagcggat
acacccgaacatgatcaacagagaccagaggagacatggtatcacgaggggccgcaatca
ctaaaggaggcacggatgtttatcgtcaattactcaattcctcatgctagggcaagattg
aaaaaggagcatttggattatcaggttccagaagccactcgcactgctagaaggcaggaa
gttcaaaataaacttagatcatttggtcttcttggtagtcagaatgctgacacaagacca
gtatgttactgtagcttcagtccaaatggaaaacttttagctactagttcatggagtggt
cttgttaaactatggaaagtacataattgcttggaagagcgtacatttcgtggccacaat
tgttatgtagactgtgttgaatggcaccctagtgccactttatccatggaaccaacagct
ttgaatttagtgtccagtggacgtgatggaagtgtacagctatggagcttaaatggagag
gaacctctaggagaacttccaactcttgaggcaagggtatctagagtacgttttcatccc
agtggaaggtttcttggggcatgtgtgcatgataacagctggagattgtgggacttagag
attcaagaagaggttctttttcaagaaggccattcaaagccagtttattgcttagctttt
cagaatgatggatctttatgtgcaacaggtggtatggatgcttctggccgtatatgggat
cttaggacagggagatgtgtcatgttcctcagtggacaccagaacccagtgttagccatt
gattggtcccctgatggctatcacctagtaacaggcagtgaggacaacactgcaagagtt
tgggatgtgaggcaacgtagatgtatatacattatccctgctcacactggcattgttact
ggtgctcgttatgatcgactagggggacagtatattgttacatgttcatatgatggctca
gttcgtctctggtgccatggatcttttcaggctatgcgtgcccttgaaggacatggacaa
aaagttatgggtgtagatgtttcacccaccgatggtattattgcaacctgctcttttgat
cgcacattcaaaatttggggaccagattag
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integrated database retrieval system
