Cherax quadricarinatus (Australian red claw crayfish): 128691806
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Entry
128691806 CDS
T09502
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03030
DNA replication
cqd03420
Nucleotide excision repair
cqd03430
Mismatch repair
cqd03440
Homologous recombination
cqd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128691806 (RPA1)
03420 Nucleotide excision repair
128691806 (RPA1)
03430 Mismatch repair
128691806 (RPA1)
03440 Homologous recombination
128691806 (RPA1)
03460 Fanconi anemia pathway
128691806 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cqd03000
]
128691806 (RPA1)
03032 DNA replication proteins [BR:
cqd03032
]
128691806 (RPA1)
03400 DNA repair and recombination proteins [BR:
cqd03400
]
128691806 (RPA1)
Transcription factors [BR:
cqd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128691806 (RPA1)
DNA replication proteins [BR:
cqd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
128691806 (RPA1)
DNA repair and recombination proteins [BR:
cqd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
128691806 (RPA1)
MMR (mismatch excision repair)
128691806 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
128691806 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
AbiJ_NTD4
GDH2_N
Motif
Other DBs
NCBI-GeneID:
128691806
NCBI-ProteinID:
XP_069936741
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MAELSTGIIADIVEGAHPENPVLQILSMKRIPSGAQERYRLLLSDGHWTSSFAMLATQLN
SMVGSGEISNNCIITLKRYICNTVQDNKKVLIILDLTVDRPGNEVGGKIGDPVNYDPNKS
RAEQQQPPQPSRNTPTMAAASGNPQRNPLGQRNPPNCGVSPTKTPSGGNVHPISSLTPYQ
NRWTICARVSNKSAIRTWSNSRGEGKLFSMDLLDESGEIRATAFNEQADKFYDMIEINKV
YFITSASLKTANKQFSNLNNDYEMTFNKMTEITPCHEVTAIPAMQFNFVPLDQLESLEKD
HILDVIGVCKETLDISTVQQKSSGRELKKRDIQIVDDTNREVRVTLWGTTAENFDGSQQP
VLAIKGAKLSDFNGRSLSLLSSSSFQINPDIREAHKLKGWFDNGGNSANTINLSNQRGGG
SGGMGSNFKMILEAKMEKLGCGDQADYFTTKATVVMIKKENALYSACPADSCNKKVIDMN
NGLYRCEKCCREFDTFNWRLLLQANVADYTDNLWATAFQDQAEMMLGVTAAELGSTRENN
IEAFQNIITAATFQSYMLKFRVKMETYNDESRLKYSVVSCSKLDPKEYNLRLISEIKQMS
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttaagcacaggaattattgcagatattgttgagggggctcatccagagaat
ccagttcttcagatattgtccatgaagcgcattcctagtggtgctcaagagcgctaccgc
ctactgttgtcagatggccactggacaagcagctttgctatgttagccacacagctcaat
agcatggttggctctggtgagatctccaataactgcataatcacactgaaacgttacatt
tgtaatactgttcaagataataagaaggtactcatcatccttgacttgacggtggatcga
ccaggtaatgaagtgggaggcaaaataggagaccctgtaaattacgaccccaacaaaagc
agagctgagcagcaacaacctccacagccttccagaaacacaccaaccatggcagcagct
agtggcaacccacaacggaatcctttaggacaacgcaatccaccaaattgtggagtttcc
cctactaaaactccatcaggtggaaatgttcatccaatctcttccctcacaccataccaa
aataggtggaccatctgtgctcgagttagcaacaagtcagccattcggacgtggtccaac
tcaaggggtgaaggtaaactcttctcgatggatcttcttgatgaatcaggtgaaattcgt
gcaacagcttttaatgaacaagcagacaagttctacgacatgattgagattaataaagtg
tacttcatcaccagtgctagtctcaaaactgccaacaagcagtttagtaatctcaataat
gattatgagatgactttcaataagatgactgagattacaccctgccatgaagtaacagca
atcccagccatgcagtttaactttgttccacttgatcaactggagagtttagagaaagat
catattttagatgttattggtgtgtgcaaggaaacccttgatattagtactgttcagcaa
aaatcaagtggccgtgagctaaagaaaagagacatacaaattgtagatgatacaaataga
gaagtacgtgtgacattatggggaaccacagcagaaaactttgatggttctcaacagcct
gttttagctataaagggagccaaattatcagatttcaatggacgttctctgtcactgtta
tcttcatcctcatttcagattaaccctgatattagggaagcccataagctgaagggatgg
tttgacaatggtggcaattctgcaaacactattaatctttccaaccaaagaggtggtggt
agtggaggcatgggttccaacttcaaaatgattttagaagccaagatggagaagcttgga
tgtggagaccaagctgattattttacaactaaagcgacagttgttatgataaaaaaggaa
aacgctctatacagtgcctgcccagctgactcgtgcaacaagaaagtcattgacatgaac
aatggattgtacagatgtgaaaagtgctgccgcgagtttgacacattcaactggcgacta
ttacttcaagccaatgttgctgactacacagacaatctatgggctacagcatttcaagac
caagctgagatgatgctaggagttacagctgctgaacttggttcaacgagagagaataat
attgaggccttccaaaatatcataacagcagcaacattccagagttatatgcttaagttc
agagtaaaaatggaaacttacaatgatgagagtcgtttgaagtattcggtggtgtcatgc
tcgaaattggatccaaaggaatacaatcttcgtttgatttcagaaataaagcaaatgtct
gggtag
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