Cherax quadricarinatus (Australian red claw crayfish): 128694098
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Entry
128694098 CDS
T09502
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128694098 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cqd03041
]
128694098 (Sf3b1)
03036 Chromosome and associated proteins [BR:
cqd03036
]
128694098 (Sf3b1)
Spliceosome [BR:
cqd03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
128694098 (Sf3b1)
Complex B
128694098 (Sf3b1)
Complex C
U2 SnRNP specific factors
128694098 (Sf3b1)
Chromosome and associated proteins [BR:
cqd03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128694098 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT
HEAT_EF3_N
HEAT_ECM29
HEAT_2
Htt_N-HEAT_1
XMAP215_CLASP_TOG
Adaptin_N
UME
DUF2298
Motif
Other DBs
NCBI-GeneID:
128694098
NCBI-ProteinID:
XP_069949859
LinkDB
All DBs
Position
43:complement(25537480..25557226)
Genome browser
AA seq
1329 aa
AA seq
DB search
MAAVRKFTTEDVEAQIQDIQNRKASLAKGGPPPPPPPAQDGLGKDEERVRLDGGGYFDSD
IYDISNGNKYANYVQSIGVDDLDEEDDDGGTTLGKKGTNTYTAPQLFLNEMVDKDHDPMA
QYKRPTIADREDEYRARRIMQVISPERMDPFADGGKTPDMNARTYAHIMQEARLRGEEAL
IRKTMQERVKEGTLQVVATNGEAPKAAPRKRGRWDQTADDTPQPKKKSTWEAETPSIARW
DETPGRAKGSETPGATPGQSTRMWDATPGHATPGHETPGHDKLTPSARRNRWDETPKTDR
GETPGHNSGWAETPRTDRGAGDLIQETPTPSASKRRSRWDETPAAQTPVATPSGALTPST
PHTPSMTPGMMTPGGITPGGTTPVGPKAIGMATPSPGQLVNMTPEQIHAFRWEREIDERN
RPMTDEELDSLFPPGYEILPPPQGYVPIRTPARKLTATPTPMMGTPQGFFMQKEGMTPKH
EDSQPKGNLPLLKPEDAQYFDKLLQDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAA
LRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKIL
VVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVV
ASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLV
DEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWRGIRQHRGKGLAAFLKAIGYLIP
LMDGEYADYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPGYIKEEILPHFF
KHFWNHRMALDRRNYRQLVDTTVEIANKVGTSEIVNRIVDDLKDENEQYRKMVMETIEKI
MANLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNALGSRVKAYLPQICGT
ILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILG
ALKGIVNVIGMHKMNPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSPREW
MRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVA
IAIVAETCSPFTVLPGLMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTSLLED
ALMDRDLVHRQTACAAIKHMAIGVYGFGCEDAMVHLLNYVWPNIFETSPHLVQAFMDSIE
GLRVALGPQKILQYVLQGLFHPARKVRDVYWKIYNNLYIGAQDALVAGYPRIMNMANNVY
TRDELDIIL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcgcaagttcacaactgaggatgttgaggctcagatccaggacattcag
aacaggaaggccagcctggccaagggtgggccgccgccgccgccgcccccggcccaggat
ggcttaggcaaggacgaggagcgagtgaggctcgacggcggtggttactttgacagtgac
atctacgacatatccaatggcaacaaatatgccaattatgtccagtctattggagtggac
gacctggatgaggaggatgatgatggaggaacaaccttgggcaagaagggcacaaacact
tacaccgctccacagctctttcttaatgaaatggttgataaggaccacgaccccatggct
cagtacaagcggccgaccatcgccgaccgtgaggacgagtaccgtgctcgccgcatcatg
caggtcatatcccccgagcgtatggatccgtttgccgacggagggaagacgccagacatg
aatgccagaacctacgcccatattatgcaagaagcacgactcagaggtgaagaagcgctg
atccggaagacaatgcaagaacgcgtcaaggaaggaacgttgcaggtggttgccaccaat
ggtgaagccccgaaggcagcccctaggaaacgtgggcgttgggaccagacggccgatgac
acaccgcagccaaagaagaaatcaacttgggaagccgagacaccatctattgctcgctgg
gacgagactccaggccgagccaagggcagtgagacacctggagcaacacccgggcagagt
acccgcatgtgggatgctacgcctgggcatgctaccccggggcatgagacacccgggcac
gataagctcacgccctcggctcgccgcaatcgttgggatgagacgccaaaaacggaccgt
ggggaaacgccaggtcataacagtggatgggccgaaacacctcgcaccgaccgtggtgcc
ggtgacctgatccaagagaccccaaccccaagcgccagcaagcgacgctccaggtgggac
gagacacctgctgcacagaccccagttgccacaccctcaggggctttgacaccttctacc
ccccacactcccagcatgaccccaggaatgatgaccccagggggtattaccccaggagga
acgacacccgtgggaccaaaggctattggcatggcaacgccatcacccggacagctggtg
aacatgacaccagagcagatccatgccttccgctgggaaagagagattgatgaacgaaat
cgccccatgacagatgaggaacttgactccctgtttcccccggggtatgagatcctgccg
cccccgcagggatatgtgcccatcaggacaccggccaggaagcttacagcaacacctacg
ccaatgatgggtacgccacaagggttcttcatgcagaaagaaggtatgacgcccaaacac
gaggactcgcaaccgaagggcaatctgccgctgctgaaacctgaagacgctcagtatttt
gacaagcttcttcaagatgttgatgaggagagtctgagtccggaggaacagaaagaacgc
aagatcatgaagctgttgctgaagatcaagaacgggactccccccatgcgcaaagctgca
ctccgtcagattacagataaggctcgggagtttggcgccggtcctctgttcaaccagatc
ttaccactgctcatgtctcctacgctagaagaccaggagcgccatcttctggttaaagtc
atcgacagagttctctacaagttggacgatcttgttcgtccttacgttcacaagatcctt
gtggttattgagcctctgcttattgatgaagattactatgctcgtgtggaaggtcgtgag
attatcagtaacttggctaaagctgctggtttagccaccatgatctccaccatgaggccc
gatattgacaacattgatgagtacgtgagaaataccacagctcgagcctttgctgtggtg
gcgtctgctctgggtattccttccctcttgccattcttaaaggccgtgtgcaagagcaag
aagtcttggcaggctcggcacactggcattaaaattgtgcagcagattgccatcttgatg
ggttgtgccatactgccccatctccgttctctggtggaaattattgaacacggcctagtg
gacgagcagcagaaggtacgtacgatcaccgccttggctctggctgctctggctgaggct
gccaccccctacggcattgagagctttgattcagtcttgaaacccctgtggcgaggtatt
cgccagcaccgtggtaagggtctcgcagctttcctgaaggctattggctaccttatccca
ctcatggatggagaatatgcagattactacacacgagaagtgatgctgattcttatccga
gaatttcagagtcccgatgaggagatgaaaaaaattgtcttgaaagttgtgaagcagtgt
tgtgccactgacggcgttgagccaggctacatcaaagaggaaatcttgccacactttttc
aagcacttttggaaccaccgaatggctctcgatcgtcgtaactaccgccagcttgttgac
acaacggtcgaaattgctaacaaggtgggcacctcggagattgtcaaccgcattgttgac
gacctgaaggatgagaatgaacagtaccgtaaaatggtcatggaaaccatcgagaaaatc
atggctaacctcggagctgccgacatcgactctcggctcgaagaacagttgatagatggc
atcctctacgccttccaggagcagacgactgaagatgtagttatgctcaatggcttcggt
acgattgtgaacgctcttgggtctcgagtcaaggcctaccttccccagatctgtggtaca
atcttgtggagactgaacaacaagtcggctaaagtgcgccagcaagcagctgatttgata
tctcgcattgcagtggtgatgaaaacctgtcaggaggaaaagctcatgggacatttgggc
gtagtgttgtacgagtatttgggtgaggagtacccagaggtactaggctcgatcctgggt
gccctcaagggtattgttaatgttattggcatgcataagatgaaccctcctattaaggat
ctcttgccacgcttaacacccattcttaagaacagacacgaaaaagtgcaagagaactgc
atcgacctggtgggccgcattgccgaccgtggcccagaatacgtgagtcctcgtgagtgg
atgaggatctgttttgagctgttggagctgttgaaagctcacaagaaggctatcaggaga
gctactgtcaacacatttggctacattgccaaagctattggtccacacgatgtgctggca
acgctactcaacaacctcaaggtccaggaacggcagaatcgtgtgtgtaccactgtagcc
atcgctatagtggctgaaacatgttctcccttcaccgtcttgcctggcctcatgaacgag
tacagagtacctgaactcaacgtccaaaatggcgtcctcaagtcactatctttcctcttt
gaatacattggggaaatgggcaaggactacatctacgcagtcacctcactcctggaagat
gccctaatggacagagacctggtccaccgacagactgcttgtgcagccatcaaacacatg
gctattggcgtctatggctttggctgtgaggatgccatggtccacctcctgaactatgtc
tggcccaatatatttgaaacctcacctcatttggtgcaggccttcatggacagcatcgaa
ggactacgagtagcactcgggcctcagaaaatcctccagtatgtgctgcagggcctcttc
catccagccagaaaagtgcgcgatgtctactggaagatctacaacaacctgtacattggt
gcccaggatgccctggtggccggatacccacggataatgaacatggccaacaacgtctac
acccgggacgaactggacatcattttataa
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integrated database retrieval system
