Cherax quadricarinatus (Australian red claw crayfish): 128694539
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Entry
128694539 CDS
T09502
Symbol
alphaCOP
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cqd04131
]
128694539 (alphaCOP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cqd04147
]
128694539 (alphaCOP)
Membrane trafficking [BR:
cqd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128694539 (alphaCOP)
Exosome [BR:
cqd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128694539 (alphaCOP)
Exosomal proteins of bladder cancer cells
128694539 (alphaCOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
128694539
NCBI-ProteinID:
XP_069952001
LinkDB
All DBs
Position
51:16267821..16484424
Genome browser
AA seq
1272 aa
AA seq
DB search
MCVESLRPPLLYPASITRYKLIFSICAVYLEVLSLPNNKLLLVDDYIMLTKFETKSARVK
GLSFHSKRPWVLASLHSGIIQLWDYRMCTLVDKFDEHEGPVRAVCFHQQQPLFVSGGDDY
KIKVWNYKLRRCLFTLLGHLDYIRTTEFHQEYPWILSASDDQTIRIWNWQSRSCVSILTG
HNHYVMCARFHPTQDLIVSASLDSTVRVWDISGIPGKPGGLRKKNVSPGMGGIGSSDDHH
TRNPELFSAGDATVRHVLEGHDRGVNWAAFHPTLPLVISGSDDRQVKLWRMNECKAWEVD
TCRGHYNNVSCVMFHPRQELILSNSEDKSIRVWDMAKRICLHTFRREHDRFWVLAAHPSL
NLFAAGHDSGMIIFKLERERPAYALHGNLLYYVKERFLRRLDLTKNKDVAVMQLRAGSRA
PVYSMSFNPAENAVLLTTRTHNVDNSSYDLYQIPKDSDPQNPDSPDSKRSAGLTAVWVAR
NRFAVMDKSHQLVIKNMQNEVTKKVTTPPCDEIFYAGTGMLLLRDSDGVSLFDVQQKRVL
GTARIAKCRYVVWSASMTTVALLSKHTILICNRKLERLCSITETNRVKSGSWDDSGVFVY
TTSNHIKYALTNGDHGIIRTLELPVYVTRVSGSSVYCLDRQATPRVLTIDSTEFRFKLAL
VQRKYDEVLQMVRGAKLVGQSIIAYLQKKGYPEVALHFVKDERTRFLLALECGNIDVALD
AAKALDDKGCWEKLAEHALMHGNHPVVEYCYQQTKNYDKLSFLYLITGNLAKLRRMMKIN
EIRKDYEGWYTNALYLGDVPERIRVLKACGKASLALLKAATHGYTQEAESLASHVEGGTI
PEPLPNAQLLQPPVPVQPMDTAWPLLTVAKGFFDTAVASGKSSGVSVAAMAVDISGDIAG
DGWGDDDENVEDGDTALEGDAEGGGWEVDDDLELPPELEGTVSSVVGADGEDGYFVPPPR
GHPPTHGWTQRSQLAIDHVLAGAFESATRLLHDQVGVVNFEPYRDLFLSSFSHSRTSFPG
APGLPSLFAYPSRNWRTAQTKDQLPALGLKLSNLMDRLKEASQLTTAAKFSEAVEKLKGI
LLAVPLIVVDTKQEVSEAQNLLRVCKEYVVGISMELHRKCLGKTTQDELKRSLELAAYFT
HCELQPGHQILTLRTAVNLAFKLKNYKMAMSFGRRLLNLGPRPEVAQNIRKVVQACEKNP
VDELIVQYDEHNPFTVCASSYVPIYRGKPEVQCPLCGASYLPEHRGITCTVCTVAQVGKD
SIGLRISPLQFR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttgaaagcctccgaccgcctctcctgtatcccgcttctattacacgatataaa
ctcatcttcagcatatgtgcagtttacttagaggttctttctcttcccaataacaagttg
ctccttgttgatgactacataatgttaacaaaatttgagacgaagagtgcaagagtgaag
ggcttatccttccattccaagaggccctgggttctagccagcttgcacagtgggatcatc
cagctatgggattatcgtatgtgcacactggtggataagtttgacgaacatgaaggacct
gttcgagcagtttgcttccaccagcagcagcctctcttcgtgtctggtggtgatgactac
aagatcaaggtctggaactacaagctacgtagatgtctcttcacactgcttggccacttg
gattacatccgaaccactgaatttcaccaggagtatccatggattctgtctgcttcagat
gaccagacaattcgtatatggaactggcagagccgatcatgtgtttcaatcctgactggg
cataaccattatgttatgtgtgcacgcttccatccaacccaagaccttattgtatctgct
tccctggactctacagtcagagtgtgggatatctcaggtattcctggcaaaccaggaggt
cttcgtaagaagaatgtatctcctggtatgggtggtattggaagcagtgatgaccaccac
actcgcaacccagagcttttcagtgcaggggatgctacagtacgccatgtgttggaagga
cacgaccgtggggtaaactgggctgcattccaccccacacttccactggttatctctggt
tcagatgaccggcaggttaagctatggaggatgaacgagtgcaaggcatgggaagtggat
acctgccgtggacactataataatgtgtcttgtgtcatgttccacccacgacaagagttg
attctatccaattctgaagacaagtccatccgtgtgtgggacatggccaagagaatatgc
cttcacaccttccgtcgagaacatgatcgattctgggttctggctgcacatccctcactc
aacctctttgcagcaggacatgacagtggaatgatcatttttaagttagaacgagagaga
cctgcttatgcattgcatggaaaccttctttattatgtgaaagaacgttttctacgtcgc
cttgacttaaccaaaaacaaagatgtggctgtcatgcagctacgtgcaggttctcgtgcc
ccagtgtacagcatgtccttcaatccagcagaaaatgctgttcttcttaccactcgtact
cacaatgtggataatagcagctatgacttatatcagatcccaaaagattcagatccccag
aaccctgactctcccgattctaagagatctgctggtttaactgcagtgtgggttgccagg
aaccgctttgctgttatggacaaaagtcaccagttggtaatcaagaatatgcagaatgaa
gtgaccaagaaagttaccactcctccatgtgatgaaatattctatgctggcactggcatg
ctcctgcttagggacagtgatggggtctctctctttgatgtccaacagaaaagagtactg
ggaactgctcgcattgccaagtgccgttatgttgtgtggtctgccagcatgactacagtg
gcactactctccaaacatactatactcatctgcaatcgtaagctagagcgcttgtgctcc
atcacagagactaacagagtcaagtctggttcctgggatgacagtggtgtttttgtttat
acaacaagcaaccacataaagtatgcactgacaaatggtgaccatggcatcatccgcacc
ctggagctgccagtgtatgtgacaagagtgtctggtagttcagtatactgtctggaccgt
caagcaactccccgtgttctcaccattgactctactgaatttcgcttcaaattggcactt
gtccaacgcaagtatgatgaagttttgcaaatggttcgtggagccaaactggtgggacag
tcaatcattgcttacctacaaaagaagggttatcctgaagtggctcttcatttcgtcaag
gatgagcgaacgcgattccttctggcgctggagtgtggcaatattgatgtggctttagat
gctgccaaggctcttgatgataagggatgctgggagaaactagcagagcatgccctcatg
catggcaaccacccagttgttgaatactgctaccagcaaacaaagaactatgataaactc
tcattcctttaccttattactggaaatttggccaaactacggcgtatgatgaagattaat
gaaatccgcaaagattacgaaggatggtacaccaatgctctttatctgggagatgtgcca
gagcgaattagagttttgaaggcatgtggcaaggcatccttggcactattaaaggctgcc
actcatggctacacccaggaagcagaatcccttgcatcccatgtggagggtggcaccatt
cctgaacctctccccaatgctcagttgctgcaaccacctgtccctgtccaacccatggac
actgcttggccactcctcactgttgccaaaggattctttgacactgccgtggccagtgga
aaaagtagtggggtatctgtggcagcaatggccgttgatatttctggtgatattgccgga
gatggatggggcgatgatgatgagaatgtggaagatggtgatactgctttggagggtgat
gctgaaggtggaggttgggaggttgatgatgatcttgagctaccaccggaactagaaggg
actgtctcctctgttgttggggctgatggtgaagatggctattttgttccccctccaagg
ggtcatccccctacacatggttggacacagcgtagccaactagccattgaccatgtactg
gctggtgctttcgagtctgccacaagattgttacatgatcaagttggggtagtgaacttt
gagccataccgtgatttgttcctgtcatctttctcccattctcgcactagtttccctggt
gccccaggcctaccctccctctttgcttatccttctcgaaactggcggacagcacagact
aaggatcagttgccagctctgggtctaaagctgtcaaatttaatggatagactaaaggaa
gcatcacagttaactactgcagccaaattttctgaagcggttgagaagctaaaagggatc
ctactagctgttccacttattgttgtagacaccaagcaggaagttagtgaagcacagaac
ttgctacgtgtatgcaaagagtacgtggtgggcattagtatggagcttcatcgtaagtgt
cttggcaaaacaacacaggatgaattaaaacgctctctggagttggctgcttatttcact
cactgtgagctgcagcctggacatcagattctgactttaagaacagctgtcaatttggca
tttaagttgaagaattacaagatggcaatgagctttgggcgtcgcctcttaaatctggga
ccaagaccagaagtggctcaaaatatcaggaaggttgtacaggcatgtgagaaaaatcct
gtcgatgaactaatagttcagtatgatgaacataatcccttcactgtatgtgccagttcc
tatgtgccgatatacagaggtaaacctgaggtgcagtgtcctctgtgtggggcatcgtac
ctgccggaacaccggggtatcacttgcacagtatgcactgttgcacaagtagggaaggac
tccattggcttgcgtatatctccactgcaatttcggtag
DBGET
integrated database retrieval system
