Cherax quadricarinatus (Australian red claw crayfish): 128695269
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Entry
128695269 CDS
T09502
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128695269 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128695269 (fand)
03041 Spliceosome [BR:
cqd03041
]
128695269 (fand)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128695269 (fand)
Spliceosome [BR:
cqd03041
]
Complex B
Other components
Prp19-related factors
128695269 (fand)
Complex C
128695269 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_15
TPR_12
NRDE-2
DUF7041
HAT
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
128695269
NCBI-ProteinID:
XP_053641756
LinkDB
All DBs
Position
14:complement(9509979..9564069)
Genome browser
AA seq
854 aa
AA seq
DB search
MIMDAPTLIIETDDLQYEEELLRNPFSVKHWQRYIEHKKDASCEQLNKVYERSLLQMPGS
YKLWHQYLRLRMQQVKGRCITDPEFESVNNTFERALVFMHKMPRVWIDYCQFLMNQKKIT
RTRKTFDRALCALPITQHNRIWPLYLKFVMSYTIPETAGRVWRRYLKLCPEDTEDYISYL
ISIGRLEEAAKKYEWCVNTDSFTSKYGKSKHQLWSELCELISKNPQETSLKNAEAIIRHG
LQRYTDQVGMLWNSLAEFYIISALFERARDVYEEGLRSVMTVRDFTQVFDAYAQFEELML
KKRMEEVGAEVDEEDETDLELRLARYEDLMQRRPLLLNSVMLRQNPHNVLEWQKRVTLYE
GKPKMIVATYMEAVKTIDPKQATGKLFSLWVNFARFYEENNQIIDARIIFQRATEVAYVK
VDDLASVWCEWAEMEIRHDNEEEALKLMKRATAPPPHKVAYNDESEPVQRRVYKSLKLWS
MYADLEECLGTFKSCKAVYDRIIDLRIATPQIIINYGMFLQENNYFEEAFKAYEKGISLF
KWPYVYDIWNTYLTKFLERYKGTKIERARDLFEQCLEKCPPSYARNLYLLYAKMEEEYGL
ARHAMQVYSRATKAVPPEEKLAIYNIYLQHAQQIYGVTKTREIYQEAIDDLPDEGAREMC
LRFAEMERKLGEIDRAREIYAYCSHICDPRITAEFWAKWTDFEVAHGNEDTMKELLRIKR
SMQAKYNTQVNMMSAQMLASADTVAGTVSDLAPGAKDGMRMLEARAVAMNQIEEQNPQAT
HAPAGGSKIMFVRGTTTKRDEEIADAARTANPDEIDLDDDDDGDDDDKEDEDDDDDLPQQ
REIPSAVFGQLKKE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgataatggatgcgccaaccttaattattgaaacggatgatctacaatatgaagaggaa
cttctacgtaaccctttttcagttaaacactggcaacgatacatagaacacaaaaaagat
gcttcgtgtgaacaacttaacaaggtctatgaaagatcgttactgcagatgcctggtagt
tacaagctgtggcaccagtatctgagactaagaatgcagcaagttaagggccgatgcatc
acagacccagagtttgagagtgttaataatacttttgaacgtgccttggtatttatgcac
aagatgcctcgtgtatggatagattactgccaatttttaatgaatcagaaaaagataaca
agaactaggaagacatttgaccgtgccctttgtgctctgccaattactcagcataaccgc
atatggcctctgtacctcaagtttgttatgtcttatactattccagagacagctggcaga
gtttggagaagatacctaaagctatgtccagaagatactgaagattacataagctacctc
atatctattggccgactggaagaggcagccaagaaatacgaatggtgtgttaacacagac
tcctttacttcaaaatatggcaaatctaagcatcagttgtggtctgaactctgtgaactc
atctctaaaaaccctcaggaaaccagtcttaaaaatgcggaggccatcattcgtcatggt
cttcaacgttacacagatcaagttggcatgctgtggaactctctggcagaattttacatc
atcagtgccctgtttgaaagagctcgagatgtatatgaagaaggtctaagaagtgtgatg
acagtgcgagattttacccaagtgtttgatgcttatgctcagtttgaagaattaatgctc
aaaaagcgtatggaagaagtgggtgccgaagttgatgaagaagatgaaactgatctagaa
ttaaggttggcaagatatgaagatcttatgcaacggcgaccactcctactcaattcagtt
atgctgcggcaaaatccacataacgttttggagtggcagaagagggtaacactttatgaa
ggaaagccaaaaatgattgttgctacgtacatggaagctgtaaaaacaattgacccgaaa
caggctacaggaaagctgttttcactttgggttaactttgccaggttctatgaggaaaac
aaccaaattatagatgcacgaatcatattccagcgtgctaccgaagttgcatatgtgaag
gtggatgatctagccagtgtttggtgtgagtgggcagagatggaaatcagacatgacaat
gaagaagaggctttaaagcttatgaaacgtgcaacagcaccgccgcctcacaaagttgct
tataatgatgagtcagagcctgtgcagaggcgggtttacaagtcccttaagctgtggtca
atgtatgctgacttggaggagtgtctgggtactttcaagtcttgtaaagctgtatatgat
agaatcattgacttgagaattgctactccacaaattattataaattatggaatgttctta
caggaaaacaactactttgaagaagcattcaaagcatatgaaaagggcatctccttgttt
aaatggccttatgtatatgatatttggaacacttacctcactaagtttcttgaacgttac
aagggaaccaagatagaacgtgctcgagatctttttgaacagtgtctcgaaaaatgtcct
ccaagctatgctagaaatctgtatctcttatatgccaagatggaggaagaatatggtcta
gcaagacatgcaatgcaggtatacagccgtgctaccaaagctgtaccacctgaagaaaaa
ctggccatatacaacatttaccttcagcatgctcaacagatttatggtgttacaaaaaca
agagaaatttatcaggaggcaattgatgacctacctgatgaaggtgcacgagagatgtgc
ttacgttttgctgagatggaaagaaagctgggtgaaattgatcgtgctcgagaaatttat
gcctactgcagtcatatatgtgaccctcgcattaccgcagaattttgggccaagtggaca
gactttgaagtggcccatggtaatgaagacaccatgaaagaacttcttcgcatcaagagg
tctatgcaagctaaatataacacacaggtgaacatgatgtctgcacaaatgttagcatct
gcagacactgttgcaggaaccgtttctgatcttgctccaggtgctaaggatggaatgcgc
atgttggaggctcgtgctgtagctatgaaccagatagaagaacagaatcctcaggcaaca
catgctcctgcaggtggttctaaaataatgtttgtcagaggcacgaccacaaagcgggat
gaagagattgctgatgcagcacgtactgccaacccagatgaaattgacttggatgatgat
gatgatggtgacgatgatgataaggaggatgaggatgatgatgatgatcttcctcaacaa
cgagaaataccgtcagcagttttcggccagctgaagaaggagtaa
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