Cherax quadricarinatus (Australian red claw crayfish): 128695369
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Entry
128695369 CDS
T09502
Symbol
spel1
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128695369 (spel1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cqd03400
]
128695369 (spel1)
DNA repair and recombination proteins [BR:
cqd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
128695369 (spel1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
128695369
NCBI-ProteinID:
XP_053641871
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Position
50:18918887..18958030
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AA seq
926 aa
AA seq
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MATLQPKEQLSLDGASEQGFLAYYGGLPEKPNTTVRVFDRGDYYTVHGQDALLAARDLFR
TNSVVKHLGSGNKKLESVVLSRLNFESLVRDLLLVKHYRVEVYKQKSSRNDWDVEYKASP
GNLSQFEEVLFGANNELTVTTGVMAVKLAVENGQRVVGVGYVDVTGRLMTVSEFNDNDTF
SNLEALVVQLGPRECLIPMGDMGPDGAKLKQVLSRNPLLVTERKRAEFNNKDAAQDLSRL
LHKKGGDVLATSARPEMDRTSAIAALSAVIKYLELLGDESNFGQFTMSLYDLSQYMRLDS
AAVRALHVEPLGSGEVSGTTAKTHTILGLLDKCRTPLGHRLLQQWLRQPLVDINKIEERL
DLVEAVVSSVELRHSLGEEHLRRIPDLNRLARKLARKAGTLQDCYKFYQCAERLPNLCEA
IAKYDGPHVASLAAVFTTPLQELLSDLAKFQEMIETTVDMEQANHGEYVIKPDFDETLAD
LRETMNGLEADIQSQLKKAANDLGLDAGKSIKLESNAQLGYFFRVTLKEEKVLRNNRNYR
MIDTNKAGVRFRNSALQNLNDQHMASREEYNEQQKTVVDEIMNIAAGYVEVIQSLGHVLG
TLDCIYALASAAVSAPIPYVRPKLLARGSGVLKLQGTRHPCLELQDDVSFIPNDCHFDKN
NGMFHIITGPNMGGKSTFLRSVGAAVLMAQVGSFVACQEAEMSVVDSILARVGAGDCQLK
GVSTFMAEMLETASILRSASNESLIIIDELGRGTSTYDGFGLAWAISEYIAKEIGSFCLF
ATHFHELTALADEVDTVKNFHVTATTAHGALTLLYQVRPGPCDRSFGIHVAELANFPPSV
IEYAKRKAGELEDDFGGGDDSEEAVKKRKLEKQEGEKIIEEFLNKAAILDIDNQTEDDLL
KEIKKLQQEAQACNNAYVSHLLSRQT
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggctactctgcagcccaaggaacagctctctctagatggagcgagtgagcagggtttc
ctggcctactatggtggtttacctgagaaaccaaatactacggtgagagtgtttgaccgc
ggagactactatactgtgcacggccaagatgccctgctggctgcacgagatctctttcgg
actaattctgtggtaaagcacttaggatcaggcaacaaaaagttggaatctgtggtgctt
agccgcctgaactttgagtctctggtgcgggaccttttgttggtgaagcactacagagtg
gaagtatataaacagaagagttcaagaaatgactgggatgttgagtacaaggcttctccg
ggcaacttgagtcagtttgaagaggtgctgtttggggctaataacgagcttacagtaaca
acgggtgttatggctgtcaagctagctgtggaaaatggccagagagtggttggagttggt
tatgtggatgtaactggcaggttgatgactgtgtctgagtttaatgataatgacacattc
agtaacttggaagcactggtggtacagctgggacctcgggaatgtctcattcctatgggt
gatatgggcccggatggcgccaagctcaagcaggtattgtctcgaaatccattgcttgtg
accgaaaggaagagagccgaatttaacaataaagatgctgcacaggaccttagccgttta
ctacataagaaaggtggtgatgtgttggctacctcagcccgtcctgagatggatcgaaca
agtgccattgctgcactgtctgctgtcattaagtacctagagctcctaggggatgaatca
aactttggacagtttacaatgtctctgtatgacctgagccagtacatgcggcttgacagt
gcagcagttcgggctctgcatgtggagccccttggtagtggtgaagtatctggcactact
gctaagacacacaccattcttggtctcctggataagtgtcgcacgcctcttggccatcgc
ttgctccaacagtggctcagacaaccattggtggacattaataagatagaggaacggctt
gatttggttgaggctgtagtatcgtcagtggagctgcgtcacagtcttggggaggagcac
ttgcgtcgtattcctgacctgaaccgcctggcgagaaaactggcccgaaaagcaggcaca
cttcaggattgttataaattttaccagtgtgctgaacgactgccaaatttatgtgaagct
atagctaagtacgatgggcctcatgtagcatctctagcagcagtcttcactactccactt
caggagctgctgtcagatctggcaaagtttcaggaaatgatagaaaccactgtagacatg
gaacaggctaatcatggagagtatgtcatcaagccagattttgatgaaacactagcagat
ctgcgagaaacgatgaatggcttggaagcagacattcagagtcagctgaaaaaggctgcc
aatgatcttggccttgatgctggcaagagtataaagttggaatctaatgcacagctgggt
tatttcttcagagttactctcaaggaagaaaaagtgttgcgtaacaacagaaactacagg
atgattgacaccaataaggctggagtgcggttcagaaatagcgcacttcagaatctcaac
gaccagcacatggcttcacgagaggagtataatgaacagcagaaaactgttgtggatgaa
atcatgaatattgcagctggttatgttgaggtgatacagtccctaggtcatgtattgggt
actttagattgtatttatgcattggcctctgctgctgtttctgcccccattccttatgtg
cggcccaagctcctggcaaggggatcaggtgtactaaagctgcagggcactcgtcatcca
tgtttggagttacaagatgatgtctcgtttataccaaatgactgccattttgataaaaat
aatggcatgttccacataatcactggccccaacatgggaggcaagagtacttttctgaga
tcagttggtgcagctgtgttgatggctcaagttggttcctttgtggcctgccaagaggca
gagatgtctgttgttgatagcattcttgctcgtgtgggtgctggagactgccagctgaaa
ggagtttcaacattcatggcagaaatgctggaaacggcttccattcttcggtcggcaagc
aatgagtcgcttatcattattgatgaactgggccgtggaacttcaacttatgatggtttt
ggattagcttgggcaatatcagagtatatagcaaaagagattggatcattctgcttgttt
gcaacacattttcatgagctgacagcacttgctgatgaggtggacacagtgaagaacttc
catgtcacagctaccactgctcatggtgctttaactcttctgtatcaggtgcgtccaggg
ccctgtgaccgcagctttggtatccacgttgcagaattagccaattttcctcctagtgta
attgagtatgccaagaggaaggctggggaattggaagatgattttggtggtggtgatgat
tcagaagaagcagttaagaaaaggaagctggagaaacaggagggcgagaaaataattgaa
gaatttcttaacaaggcagctattcttgacatcgataaccaaactgaagatgatctactg
aaggagatcaagaaactgcaacaagaagctcaagcttgtaataatgcatatgtttcacac
ctcttatccaggcagacttga
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