Cherax quadricarinatus (Australian red claw crayfish): 128696702
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Entry
128696702 CDS
T09502
Symbol
rad50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03440
Homologous recombination
cqd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128696702 (rad50)
03450 Non-homologous end-joining
128696702 (rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cqd03032
]
128696702 (rad50)
03400 DNA repair and recombination proteins [BR:
cqd03400
]
128696702 (rad50)
DNA replication proteins [BR:
cqd03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
128696702 (rad50)
DNA repair and recombination proteins [BR:
cqd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
128696702 (rad50)
BRCA1-C complex
128696702 (rad50)
NHEJ (non-homologous end-joining)
MRX complex
128696702 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
GAS
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
ABC_tran
AAA_29
Zf_2nd_IFT121
AAA_13
SNARE
Motif
Other DBs
NCBI-GeneID:
128696702
NCBI-ProteinID:
XP_069950645
LinkDB
All DBs
Position
46:12697685..12906037
Genome browser
AA seq
1309 aa
AA seq
DB search
MSRIDRLAIQGIRSFGPDEPRKIQFFSPLTLILGQNGCGKTTIIESLKYISTGEVPPGCG
RGGSFVHDPKMAKELTVRGQIKLLFQDTRGQLMVTTRSLETTQKAKKLECKTLDATIKRM
APDGTSITMSSKCSDFEALMASSLGVSKSILNNVIFCHQEEANWPLDEGKKVKDRFDAIF
NATKYIKCLETIRKLRLEVKAKIKNLQDILVELKKWKEEANRKRVDLKSNEDKHKNIEAE
KQGLTSELEPVILRLKQISNIEGDIGRIREELSGKQHQLESLRRTQDELRATLREQFTCS
DEELYNMIKDFQRDLEQKEADQSRLESQVYDLEREVEKTQDEVARAVRRQGELESAHNRQ
KNHIDRRNKLMTNIVEEFTITEFLGIQNFKDEQADSMLSQLLKIIKEERGNILAKKEECE
KEEAKIQSEIDDLRSREAALDHEVKIKGTQLEELGRKMRQAKQTLSLNESRFSLNDLNEI
KTELLEVDQMIVAEEGKLDIHKVMEEIDGGKKKRREVEYKLDEIKRVLARMNRQAEARSQ
YDIHVKERKDLENKVAYLKRKYIDELEHLLGEVPEDNLKNKVEACTVNLKSRISELRRDM
DKLNKRKTQLDTSIKGHKQQIERKEKDIKDLETNIYTMCQGKDLDIALEKSKKVKDELTR
DRGDLSSSITVLTRFTDKLKLRDCCPLCHRDFSTKDEVNQLIEELERKVSSVPGKLESVK
EKLAKEEKLHEQMIQLKPQRDQANRAAAELEKIRAQMNAETSELEAVCLELESKTEILEI
NQSDEETATQMQPDIIMIDNNLRKIKQLKDQIEDLQATLGSSDGGIGMEEAMSQQSHLED
ELRKSQTKVEDLQDQLQEHKEKVQVLKDRKLRLCSQELNMKTKLQETEKLKEEVSRLEED
RKRLMEERDAAQAEVAPFKYQITSKLGEKTKVIQGKEAWIETQNQKVIMISEKHRSVNEL
QKSIASYVTGGEEKQLMESRQQVTSIQAKVASLESSKRSLEEQNRNIHKEITNQRERKRG
LDDEKKIRDKEIQAKQLEQSITVLEERITGFDYKTLIDEKNHLNEKWHTLQNKRAALDGR
LLEVKRVIQDLESDLKRKDIRDAEKNYRDKFVEMKCTDMAANDMNKYYKALDTAIMRFHN
DKMKTINGIIRELWRTTYKGNDIDYIEIKTDESESQGADKRRTYHYRVVMVKNDVEMDMR
GRCSAGQKVLASLIIRMALAETFSANCGILALDEPTTNLDRENIDALSYALLSIANKKTH
QRNFQLIVITHDREFLEKMSHAEFLDCYYKLSRDERGLSTISCCEISEL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaattgacaggttggccatccaaggcatacgaagctttggaccagatgaacca
agaaagattcaatttttttcccctcttactctcattcttggtcagaatggctgtggaaag
actacaattattgagtcgctgaaatacatatctacaggggaagtgccaccaggttgtggg
cgtggaggctcttttgtccatgacccgaagatggccaaggagttaacagtacgagggcag
attaagttactttttcaagatactcgaggacaactcatggtgacaactcgatctttagag
actacacagaaagccaagaaattggaatgcaaaaccttagatgctacaatcaaaagaatg
gctcctgatggaactagcattactatgtcaagtaaatgctctgacttcgaggctctgatg
gcttcatccttaggtgtttctaaatctatactgaataatgtaatattttgtcatcaagag
gaagcaaattggccactagatgaagggaaaaaggtgaaagacaggtttgatgctatattc
aacgctacaaaatacatcaaatgtttggagactattcgtaagcttcgattggaagtgaaa
gccaaaataaagaatttgcaagatatcctggttgagttaaaaaagtggaaggaggaggca
aatcgtaaacgtgttgacctaaaatctaatgaagacaaacataaaaatattgaggctgag
aaacagggcttgacttcagaactggagccagtaatactgcgtctgaaacaaatttctaat
atagagggggatataggacgtataagagaagaactcagtggtaaacaacatcagctagaa
tccttaagaagaactcaagatgaattgagagcaacattgagagaacagtttacatgttct
gatgaggaactgtacaatatgatcaaagactttcaacgagacctggaacaaaaagaagca
gaccaaagcaggttggagtcgcaagtgtatgacttggagagagaggtggagaaaacccag
gatgaggttgcaagggctgtgaggagacaaggagagttggaatctgctcataacagacag
aaaaatcacattgacagaagaaataaactgatgacaaacatagttgaagaatttacaatc
actgagttccttggcatccagaattttaaggatgagcaagcagattcaatgttatcccaa
ctgttaaagataattaaagaggaacgtggaaatattttggccaaaaaagaagaatgcgaa
aaagaagaagccaaaattcagtctgaaattgatgacctgcggtctcgagaagctgcttta
gatcatgaagttaaaatcaaagggacacagttagaagaacttggaaggaaaatgaggcaa
gctaagcagacactttcacttaatgagagcagattttctctgaatgatcttaatgaaatc
aagactgagctgttagaagttgaccaaatgattgttgctgaagaaggaaaacttgatata
cacaaggtgatggaagagattgatgggggaaagaaaaaaagacgtgaagtagagtacaaa
ctcgatgaaattaaacgtgttttggcaagaatgaatcgtcaggctgaagctcgctcacag
tatgatatacatgtaaaggagagaaaagacctggaaaacaaagttgcatatttgaagcgt
aaatatattgatgaactggagcatctgcttggtgaggttcctgaagataacttaaaaaat
aaagtggaagcttgcacagttaatttgaagagccgcatatcagagctgcggagagatatg
gataaattaaacaagagaaagacacaactcgacaccagtatcaaaggacataagcaacag
attgagagaaaagagaaggatattaaagatcttgagaccaatatttacaccatgtgtcaa
ggaaaagacctggatattgccttggagaagtccaagaaagttaaggatgaattaacacgt
gacaggggagatttatcaagttccattactgtactcactcggttcacagacaagctgaaa
ctacgtgactgttgccctttgtgtcacagagatttttctacaaaagatgaagttaatcaa
ctcattgaggagttggaaaggaaggtaagtagtgtcccaggaaagctagaatctgtaaag
gagaaacttgcaaaggaagagaaactacacgagcaaatgatacaacttaagccccagcga
gatcaagccaatcgtgcagctgctgaactggagaaaattcgagctcagatgaatgctgaa
acgtctgaactggaagcagtttgtttagaattagagtcaaagacagaaattttggaaatt
aaccaaagcgatgaggagacagctacacagatgcagccagatataattatgatagataat
aacttgcgcaaaattaaacagcttaaggatcaaattgaagaccttcaggcaactttaggc
agctcagatggtgggattggcatggaagaggccatgagccaacaaagtcatttagaagat
gaacttcgtaagtcccagactaaagttgaagaccttcaagaccagctacaggagcataag
gaaaaagtgcaggtccttaaggatcgtaaattaagactttgtagtcaagaattaaatatg
aagaccaaactgcaggaaacggaaaaattaaaggaagaggtgtcaagattagaggaggac
cggaagcgtctgatggaagagcgtgatgcagcacaggcagaggtggccccattcaaatat
cagattaccagtaaattaggagagaaaaccaaggttattcaaggaaaggaagcctggatt
gaaacacaaaatcagaaggttattatgatttctgaaaagcatagatctgtgaatgaacta
caaaaaagcatagcttcctatgtgactggaggtgaagaaaaacagctaatggagagtcgt
caacaagtaacatccatccaggcaaaagtggcctctctagaatcaagcaaaaggtcactt
gaagagcaaaatcgtaatatccacaaggaaataaccaatcagagagaaagaaaaagaggt
ctagatgatgaaaaaaagattcgtgacaaagaaattcaggcaaagcaactagagcagagt
attacagttttagaagaacgcattacaggatttgactataagactctcattgatgaaaag
aatcacctgaatgaaaaatggcacacattgcaaaacaaaagagcagcattagatggtcgt
ctgttggaagttaaaagggttattcaagatttagaaagtgaccttaaacgaaaggatatt
cgagatgcagagaagaattacagggataaatttgtggaaatgaagtgcacagatatggca
gcaaatgatatgaataaatactacaaagctttagacacagctatcatgcgcttccacaat
gataagatgaagacaatcaacggaatcataagggaactctggcgtaccacttacaaaggc
aatgatattgattatatagagataaaaactgatgaatcagaatctcagggtgcagataaa
cgaagaacgtatcattatcgagttgttatggtgaaaaatgatgtagaaatggacatgcgg
ggcaggtgctctgcaggtcagaaggttttagcatctcttattattagaatggcccttgca
gagacattcagtgcaaactgtggtattcttgcactagatgaaccaactaccaatctagac
cgtgaaaacattgatgctttatcatatgcattgctcagcattgctaacaaaaaaacacat
caacgaaacttccagttgattgttatcacacatgacagagagttcttagagaagatgtct
catgcagaattcttagattgttactacaagttgtccagagatgagaggggcttgtcaaca
atctcttgttgtgagatttctgaactctga
DBGET
integrated database retrieval system
