KEGG   Cherax quadricarinatus (Australian red claw crayfish): 128697219
Entry
128697219         CDS       T09502                                 
Symbol
tex
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
cqd  Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03013  Nucleocytoplasmic transport
cqd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128697219 (tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    128697219 (tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqd03019]
    128697219 (tex)
   03041 Spliceosome [BR:cqd03041]
    128697219 (tex)
Messenger RNA biogenesis [BR:cqd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     128697219 (tex)
Spliceosome [BR:cqd03041]
 Complex C
  Other components
   EJC/TREX
    128697219 (tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    128697219 (tex)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR19_1st Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N eIF2A DSE1_N Beta-prop_IFT140_1st RMC1_N Beta-prop_EML WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_HPS5 Beta-prop_EIPR1 CFAP251_N Beta-prop_WDR75_1st NBCH_WD40 PROPPIN PAC11 Beta-prop_TEP1_C TRM82_WD ASA1 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR11_1st PD40 Peptidase_S9_N KNTC1_N Beta-prop_VPS8 Beta-prop_ELP1_1st Beta-prop_SCAP Beta-prop_NUP159_NUP214 DPPIV_N Cytochrom_D1 Beta-prop_Nup120_160 WD_LRWD1
Other DBs
NCBI-GeneID: 128697219
NCBI-ProteinID: XP_053644755
LinkDB
Position
89
AA seq 324 aa
MVYLDDMRTYFHSHNKQKEYVGHNSKVHTIGWNADGRRLASGSYDKCVTIFVFDGHRETL
RKDYTYKGHGDSVDQLCWHPTHSEQLTSASGDKTVRIWDTRTHKCSATINTKGENINITW
SPDGQTIAVGNKEDLVSFIDVRSQKIRHEQQFKFEVNELSWNNANDLFYLTNAQSGQGYI
HIYNYPEMELVHCIHAHPGNCICIKFEPNGQYFATGSADALVSIWDAQELYCRMTLSRLE
WPVRTLSFSHDGQLLASGSEDQMIDIAHIATGEQVAHISVAYPTFTLAWHPRHFLLAYAC
DDKDDRERDRDAGTVKLWGLGERS
NT seq 975 nt   +upstreamnt  +downstreamnt
atggtgtacctggacgacatgaggacgtatttccactctcataataagcagaaagaatac
gtgggacacaactctaaggttcatactattggctggaatgctgatggtcgccgcctggcg
tcaggatcttatgataaatgtgtcactatatttgtttttgatggtcaccgcgagacactg
agaaaggactacacgtataaaggtcatggtgatagtgttgaccaattgtgttggcacccg
acacactctgaacagctcacctcagccagtggagataaaactgtaagaatttgggataca
cgcacccataaatgttctgcgaccatcaatacaaaaggtgagaacatcaacatcacttgg
tccccagatggccagactattgcagttggcaacaaggaggacctggtttctttcattgat
gtgcgcagccagaagatccgtcacgaacagcagtttaaatttgaagtcaacgagttatcc
tggaacaatgccaatgatttgttttacctcaccaatgcacagagtggtcaaggatacatt
cacatctacaattatccggagatggagctagttcactgcattcatgctcatcctggcaac
tgtatttgtatcaagtttgaaccaaatgggcagtactttgccacaggctctgctgatgcc
ctcgtgtctatctgggatgcgcaggaactctactgccgcatgacattatccagattagaa
tggccggttcgcaccctgagtttctctcatgatggtcagctgttggcatcaggcagcgag
gatcagatgattgacattgctcacatagccactggggagcaggtggcacacatcagtgtt
gcatatcctaccttcacactagcatggcatccaagacactttcttctggcatacgcttgt
gatgacaaagatgatcgagaacgcgaccgcgacgctggaactgtcaaactctggggtctt
ggtgagcgaagttga

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