Cherax quadricarinatus (Australian red claw crayfish): 128697488
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Entry
128697488 CDS
T09502
Symbol
Caf1-55
Name
(RefSeq) chromatin assembly factor 1 p55 subunit isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03082
ATP-dependent chromatin remodeling
cqd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128697488 (Caf1-55)
03083 Polycomb repressive complex
128697488 (Caf1-55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cqd03036
]
128697488 (Caf1-55)
Chromosome and associated proteins [BR:
cqd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128697488 (Caf1-55)
Histone modification proteins
HAT complexes
HATB complex
128697488 (Caf1-55)
HDAC complexes
Sin3A-HDAC complex
128697488 (Caf1-55)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
128697488 (Caf1-55)
PRC2.2
128697488 (Caf1-55)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
128697488 (Caf1-55)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128697488 (Caf1-55)
Chromatin remodeling factors
NuRD complex
128697488 (Caf1-55)
NuRF complex
128697488 (Caf1-55)
NuRF complex (fruit fly)
128697488 (Caf1-55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_IFT80_2nd
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
AftA_C
Motif
Other DBs
NCBI-GeneID:
128697488
NCBI-ProteinID:
XP_069950112
LinkDB
All DBs
Position
44:complement(5287463..5340703)
Genome browser
AA seq
473 aa
AA seq
DB search
MTDKEGTKGKHTTTKKSIGDGGGPAPVRAPPDLPTTVAVAEVTPVQRLQDTFDDAVEERV
INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQ
NHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQN
PCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSA
SDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWD
TRANNTNKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLSLKLHSFAMH
KDEIFQVAQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGH
TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPASELESGAS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaagagggcaccaagggtaagcatacaaccaccaagaaatccataggggat
ggcggtggccctgcgcctgtgcgtgcgccaccagacctcccgacaaccgtggctgtggca
gaggtaacacctgtgcaacgtctgcaagacacatttgatgatgccgtggaggagcgggtt
attaatgaggagtacaagatatggaagaagaataccccatttttgtatgaccttgtcatg
acccatgccctagagtggccatcactaacagcacagtggctacctgatgtcacaaggcca
gaaggcaaggactacagtattcaccggctgatacttggtacacacaccagtgatgaacag
aaccacctgctcattgcctctgttcagcttccaaatgaagatgcacagtttgatgcatca
cattatgacaatgagaaaggagagtttggaggttttggatctgtcagtggaaaaattgaa
attgaaataaaaatcaatcatgaaggagaagtgaatagagctcgatacatgcctcaaaat
ccctgtgttattgcaactaaaaccccatctagtgatgtccttgtttttgactatactaag
cacccatccaaacctgacccatcaggagagtgtcatccagatctcaggctacgaggtcac
caaaaggaaggctatggtttatcatggaatcctaacctgaatggttatcttcttagtgca
tctgatgaccatactatctgtttatgggatattaatgccacccctaaagaaaacagagtt
attgatgcgaaaactatcttcacgggacatacagcagttgttgaggatgttgcgtggcat
cttcttcacgaatcgctttttggttcagtagcagatgaccaaaagctgatgatctgggat
acacgtgccaataacaccaataagccttcccacacagttgatgcccacacagcagaggtc
aattgcctctcctttaatccctattctgaatttattctggctactggcagtgccgataag
acggtcgctctgtgggatttacgtaatctgagcttgaagcttcactcgtttgccatgcac
aaggacgaaatcttccaggttgcacaggttcagtggtcacctcataacgagacaatcctt
gcaagttcaggcacagatcgtcggctgcatgtgtgggacctcagcaagataggtgaagaa
cagagtgctgaggatgctgaagatggacctcctgaactattgttcattcatggaggtcat
actgctaagatttctgatttctcatggaaccctaatgagccttgggtaatctgttctgtc
agtgaagacaatattatgcaggtgtggcagatggcagaaaatatctacaatgatgaggaa
ccagagactccggcttcagaactagaatctggggcatcttaa
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integrated database retrieval system
