Cherax quadricarinatus (Australian red claw crayfish): 128698914
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Entry
128698914 CDS
T09502
Symbol
Hpr1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03013
Nucleocytoplasmic transport
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128698914 (Hpr1)
09122 Translation
03013 Nucleocytoplasmic transport
128698914 (Hpr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128698914 (Hpr1)
03041 Spliceosome [BR:
cqd03041
]
128698914 (Hpr1)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128698914 (Hpr1)
Spliceosome [BR:
cqd03041
]
Complex C
Other components
EJC/TREX
128698914 (Hpr1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128698914 (Hpr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
DEATH_SH3BP4
LIP
DncV_C
Motif
Other DBs
NCBI-GeneID:
128698914
NCBI-ProteinID:
XP_069952876
LinkDB
All DBs
Position
55:71825..171417
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AA seq
689 aa
AA seq
DB search
MADSGLNFQRIFTKVQSTLPRCIEDVDALPITNIFSTKISETTKHCVEAAIRNYVTKKVI
DGETTELATVTAITSVCIELVRHELSLPTLPVLVLTDSFDMLTIKQCEQLFSFVESNVGV
WKEDTFFTPCKTMVLRMCNDLLRRLSRSQNTVFCGRILLFLARFFPFSERSGLNLVSEFN
HENVTTFTNVETTDMEDDEDEEKGEENRLRLGYTLYTKFWSLQDFFRNPVQCFQKAPWKM
FTVYCGDVLEAFRSFKLDNVQSSGSGGAHLTRTLSEPTHSNESSSLQPQVDQYFAKYLTN
QKLLDLQFSDTNFRRYVLLQILILAQYLTSNIKFKQETLTEEQSAWVKKTEEVVYSLLEE
TPPDGPVFVTTVKHILKREEMWSEWKNEGCPEFKKPEGYEKRKVKQNGKVEEQKEDGDTK
SSKKLRQKRKVGDIIRDADSKNKFSMGNSEMTRLWNLNTNNLEACKMLDRDFVPALETYF
TPAIEQLSPKSELKEQDRLVNDSNFGWRGLRLLACRSPHFFTHSASPIATLPEYLTTMIK
KLAKDLPSQLTADIKVEEEDDKEEEKVIPVLEQNDGVKEEEEDMEEDGGDEERADIKAIT
EEEQKALAKNFDKLCKDKWKLLAKKLGFEDDEIEFIEKEKASKEGSVESQVAYMLKLWVE
NEGDEANKESLLYTLGGMKMAAIADGIFT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagcggcctcaattttcaacgtatttttacgaaagtacaatcaacgttacca
cgctgcattgaagatgtagatgctttacccatcacaaacatattttctacgaaaataagt
gagacaacaaagcactgtgttgaggcagcaatccgcaactatgttactaagaaggtgatt
gatggggaaactacagagttagccactgttacagctataacatcagtatgcatagaatta
gtgcgccacgagttaagcctcccgaccctgcctgtgctggtgctcaccgattcttttgac
atgcttactatcaaacagtgcgagcaactcttctcttttgttgaaagtaatgttggtgtc
tggaaagaggacacattcttcacaccttgtaaaaccatggtacttcgcatgtgtaatgat
cttttgcgccgactctcgcgctcccaaaatacagtgttttgtggtcgaattcttctcttc
ttggcaagattctttccattttctgagagatcaggattaaatttggtgtctgaatttaac
catgaaaatgttaccacctttacgaatgtggagactacagacatggaagatgatgaagat
gaagaaaaaggtgaagaaaatcgactacgactgggctacaccctgtatactaaattctgg
tcactccaagacttcttcagaaacccagttcagtgttttcaaaaggcaccttggaagatg
ttcactgtgtattgtggagatgttttagaagcatttagaagtttcaagttggataatgtc
cagagcagtggaagtggaggggctcatctcactcgtacattatctgagccgacacattcg
aatgaaagttccagcttgcaaccccaggtggaccagtattttgcaaagtacttaacaaac
cagaagttgctcgaccttcagttttcagatacaaatttccgtcgttatgttttactgcag
atcttaatcttggctcagtacttgacctccaatatcaagtttaaacaggagacgttaaca
gaagaacagtcagcctgggtgaagaaaacagaagaagttgtgtattcattgcttgaagag
actcctcctgatggtcctgtcttcgtcaccactgtcaaacatatattaaagagagaagaa
atgtggagtgaatggaaaaatgaaggttgcccagaattcaaaaaaccagaaggttatgag
aaaagaaaggtgaaacagaatggtaaggtggaagagcagaaagaggatggtgataccaag
tcatccaagaaattacgtcagaagcgaaaagtgggtgatataatacgagatgctgattca
aaaaataagttttctatgggcaattctgaaatgactcgtctttggaacctgaatactaat
aacctggaagcatgcaagatgcttgatcgagactttgtaccagcgcttgagacctacttc
actccagctattgagcagcttagtccaaagtcagaactgaaagaacaggacaggctggtc
aatgacagcaactttgggtggcgaggtttgcgactgctggcctgccgctcgccccatttc
ttcactcattcagccagtcctattgccacattacctgaatatcttaccaccatgatcaag
aaactagcaaaagatttaccttcacagctaacagcagatattaaagtggaagaagaagat
gataaagaggaggaaaaggttatccctgtgctagagcaaaatgatggggtgaaggaagaa
gaggaagacatggaggaggatggtggagatgaagaacgagcagatatcaaggctatcact
gaggaggagcagaaagctctggctaagaattttgataaactctgcaaagataaatggaag
ctccttgccaagaagcttggatttgaagacgatgagattgaatttatcgagaaggagaag
gcaagcaaggagggcagtgtggagagccaggtagcatatatgttaaaactttgggtggaa
aatgaaggtgacgaggccaataaggagagtcttctctatacgcttggtggcatgaagatg
gcagccattgctgatggaatattcacttga
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