Cherax quadricarinatus (Australian red claw crayfish): 128700351
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Entry
128700351 CDS
T09502
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128700351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqd03021
]
128700351
03036 Chromosome and associated proteins [BR:
cqd03036
]
128700351
Transcription machinery [BR:
cqd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128700351
Coactivators
SAGA/TFTC/STAGA complex
128700351
Chromosome and associated proteins [BR:
cqd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128700351
STAGA complex
128700351
TFTC complex
128700351
SAGA complex
128700351
SLIK complex
128700351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
TFIID_NTD2
EIF3I
NBCH_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR41
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
WDR54
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
WD_LRWD1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
128700351
NCBI-ProteinID:
XP_053649454
LinkDB
All DBs
Position
71:16878044..16915265
Genome browser
AA seq
648 aa
AA seq
DB search
MKKVKTEKIMANVNEYLKRRNLEQSQPSGGTISEQQAGVLGLVSPSTPNSFTFSTTSTHH
SHIDHQYVRLKSWMMEASEPCRSELSQVLFPLFIHLYLELVAGTGRQAAKKFFVKHYQVF
LVNRDYENTLSQVLNAANINASGDMNSSPIIQNLKSGKYLVRLSELTLNYFLRYLKATEN
PILLQIFNTYIEVEVDDSGAGSSGAVFRSPELNSALSNALVNGHTPESMSSDSAIATADG
LDCTQEELQKVKDVMARIRLAHPAPPSLCVYTVSNAYNGLSCASVNAEGKLLSCGFEDSV
IKLWKLTPPVHNVGFRKATTVVGPRGGISHTLLACDNSRIEDDGDGREEEEEEMMADSRN
GGRRRNRGGELFALRGHRGPVLDTAYTHDSTHLLSVSEDTTMRLWNLESGQAVALYRGHN
YPVWCVAVAPLTMYVATGSYDSTVKIWATDCTYPLRTMAGHTQAVDCVAFHPNGTYVASG
SCDRTVRLWQITDGDAARILLHHKSAISAVAFAPNGKYLASGSDDGAVVVWDLAGGRVMA
ELSTGNQAGNGNTEISPHVDSIVGLCWSADSALLVSASSDGCVRTSHLGQTHAGDGGPGW
ELNEVCQVQCSGSTNGGMGSNGGGGQLLHTSLTAHNYLTAVTTVDVER
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggtcaagacagagaaaataatggctaatgtcaacgagtatttaaagagaaga
aacttggagcagagccagccatcaggggggacaatttcagagcagcaagctggagtgtta
ggtcttgtatctccttctacacctaacagcttcaccttctccactacctctactcaccat
tcccatattgatcatcagtacgtcaggcttaagtcatggatgatggaggcaagtgaaccc
tgtcgatcagagttgtcacaagtgctgtttcctctattcattcatctttacctggagctg
gtggctggcacagggcggcaagcagctaagaagttttttgtaaagcactaccaggtattc
ctggtgaatcgggactatgaaaatactctatcacaggtgctaaatgcagctaacatcaat
gcatctggtgatatgaactcctctcctatcattcagaatctcaaaagtggtaaatacctg
gtgcgtttgagtgaactgactctgaattacttcttgcgatacctcaaagctacagaaaac
ccaattttattgcaaattttcaatacctatatagaagtggaagtggatgactctggtgct
ggcagttcaggggcagttttccgcagcccagaattaaattctgctttatcaaatgctttg
gtaaatggtcacacaccagagtctatgtcctcagattcagcaatagctacagcagatggg
ttggactgtactcaggaggagctacaaaaagtgaaagatgtgatggctcgtataagatta
gctcaccctgcccctccatcactgtgtgtatacactgtttctaatgcctataatggcttg
agttgtgcgagtgttaatgcagaaggcaaattgttgtcatgtggatttgaagatagtgtt
attaaattgtggaagttaactcctccggtacataatgtagggtttagaaaagctaccacg
gtagtagggcccagaggtggaatatctcacacccttttagcatgtgacaattcacgtatt
gaggatgatggcgatggtagggaagaggaagaagaggaaatgatggcagattcaagaaat
ggtggaagaagaagaaaccgtggaggtgagctctttgctctaagaggacatcgtggacca
gttcttgacactgcttatacccatgattcaactcatcttctgtctgtcagtgaagacaca
actatgcgcctttggaatttggaaagtggtcaggcagttgctctttacagaggacacaac
tatcctgtgtggtgtgtggcagttgctccacttaccatgtatgtagctactggttcgtac
gatagtacagtaaaaatatgggccacggactgcacatatccgttacgcaccatggcaggt
cacactcaagcagtggattgtgtagcttttcaccctaatggtacatatgtggctagtgga
tcttgtgatcgaacagttaggctatggcagataacagatggggatgcagcacgaattctt
ctccatcataaatctgccatcagtgctgtagcatttgccccaaatggaaagtacctagct
tcaggaagtgatgatggtgctgttgtagtgtgggatcttgctggtgggcgggtgatggcc
gaactgagtactggaaaccaggctggcaatgggaatacagaaatttcaccacatgtagac
tccatagtaggcctgtgctggtctgctgactctgctctcttagtctctgcctccagtgat
ggctgtgtgcgcaccagccatcttggacaaacacatgcaggtgatggagggcctggatgg
gagctaaatgaagtgtgccaggttcagtgtagtggaagtacaaatggaggaatgggtagt
aatggaggagggggacaactactacatacttcccttactgcccataactacctcactgct
gttactactgttgatgttgagagataa
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