Cherax quadricarinatus (Australian red claw crayfish): 128700380
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Entry
128700380 CDS
T09502
Symbol
tho2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03013
Nucleocytoplasmic transport
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128700380 (tho2)
09122 Translation
03013 Nucleocytoplasmic transport
128700380 (tho2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128700380 (tho2)
03041 Spliceosome [BR:
cqd03041
]
128700380 (tho2)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128700380 (tho2)
Spliceosome [BR:
cqd03041
]
Complex C
Other components
EJC/TREX
128700380 (tho2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128700380 (tho2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
128700380
NCBI-ProteinID:
XP_053649528
LinkDB
All DBs
Position
71
Genome browser
AA seq
1524 aa
AA seq
DB search
MHTAKMAGSYRLFTPETWKNWDKSGKAEVVQMIKHFLKDDPDNPGLSKPNQVKDLSRALY
ELLSAILKGHLRRDFARPLLTDMINWHPDIASQLVEVSTLLDLETSTIDRLNKNRDQFIA
LLKSLDADKLMKERLEIETLGEAGIVKNKKNFHTKQIKVKTKLFYKQQKFNLLREETEGY
AKLITELNQDITDRVTPSSIIQVIRSLIGGFNLDPNRVLDLILESLECRPEQHQFYTKLL
NQYPCESATISELLGFKLNNYLNSGKDTKGIYTTMALLIQADILKISDIYIWLTPEDSSM
IEDYQKEENDAKEIASKVNVVSTKDKDKEKDKEKEREEEEKEKDDQRNHEKYNSNQKIQL
CVALLKVGAWEHFMEISKRFPDFYLVSSPPIGQALCQLIHATIEPIYRKVCTLPSRLKGT
VVELLNNPLAPRPSYNFNDVCTTIFPMLSALGPHLYIDPGLMYKVLRVARVALKQVKVGA
DGVRNNFYYEFLDVLDEALLPSLSMLDANPCLAEEIWDTIKIYPYQHRYKLYGRWKNETC
NQHPMLIKYRARLLKKAKFIMMRITKETIKPVSRGIGKLTHNNPGPVFHYILIQVQLYDN
LIGPVVDSFKYLTSLSYDVLGYCIVEILSENKDRIANDAMAISPWLQSLSSFCGTVYKKY
IIDLGGILQFVANQLKAEKSIDLLILREIVQKMGGTDTLEDLTSEQLDAMCGGELLRREA
GQYQQERNTKRSSIRLKEALLENNLAIPLLLLMAQQRSSVVYNQTESPHLKLVGKLYDQC
QDTMVQFGSYLFQVVTIEELNDRLPSIGTLLSDCHINADVAFFLARPLFIHMLNSKYDEL
RRQDKGEKKLTLEQKKLRYIEACNEVFVPIVSSIRPHFSIKVWEDMDPSFFLTFWTLTMS
DLEVPLHMYDKEIKKIDPNPSGNKRKKETDRLLALKEKLQEEEKRQKEHVERVHARLQQE
KDRWFMLRAARSPKNDTVTAFLQLCLFPRCTFTALDAIYCAKFVKMLHNLKTPNFSTLIC
YDRMYCDITYTVASCTEQEAHRYARFLLGTLETVMHWHASQTNYEKECANYPGFVTKYRV
SRQEANDYVDYENYRHVVHKWHYKITKALVTCLESGDYIQIRNAILILQGIIQRFPAISN
LAAVIEKRIEKVKLAERNHRNDLYVLANSYSGRLKAIKPNIMPETEFHIVPKRPQEAKVV
NGTQENTSAPSGGESKPTAEMTESKIVKMIVSDSTNGDVDAKDEKEDKDIKKAEITSKSS
KDKKENLEKKPIDDNEIKKEDKEKKEKDRDRDKKEDREEKSKRRSKEPKRSKYEDEDYGE
SERDERPSGGTTERERESSVTSNTSSTSTKMEPPEASPRGSKRRKTEHSSKCGRVPILQR
CHAVGLLATAATVVEPSGSLSRNKEEGSRREHKHKERSKSQEPDSDVSTKETKKEKKERK
RERSSDEAADGELKRKKNDERSKSNGRSDDDHKHRHQQHRADSEEYHDRYVNESRGKDHR
DYDYEREYERDYEKHPSSRHKRKN
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgcacacagcaaagatggcgggcagctaccgcttgtttacaccagaaacatggaaaaac
tgggacaaatctgggaaagcagaagtggttcagatgatcaaacattttctcaaagatgat
ccagataatccagggttatctaaacctaatcaagtgaaagacctttcacgtgctttatat
gaacttctttcggctatcttgaagggtcatcttcgaagagactttgcacggccccttctt
actgatatgattaattggcatcctgacattgcctcccaactagtggaagtgtcaacattg
ctagacctggagacctccacaattgatcgtctcaataaaaatcgtgaccagttcatagca
ctgctgaaatccctggatgcagacaaactgatgaaagaaagattagaaattgaaacttta
ggagaagcaggcattgttaagaataaaaagaattttcacacaaagcagattaaagtgaag
accaaattattttacaaacaacaaaagtttaatctattacgagaagagactgaaggctac
gccaagcttataactgagctcaatcaggacataacagacagagtcaccccaagctccatc
atacaagttatacgtagccttattggtggtttcaatttggatccaaatagagtgctggat
cttattttggaatcgttagaatgccgtccagagcagcaccaattctataccaaattgttg
aaccaatatccctgtgagtcagctaccattagtgaacttcttggattcaagctcaacaac
tacttaaacagtggaaaagatacgaagggaatctatacaacaatggccctacttatacag
gctgatattcttaaaatttcagatatatatatatggctaactcctgaggactcgtccatg
attgaggactaccagaaagaggaaaatgatgcaaaagaaatagcttccaaagtcaatgtt
gtttccaccaaagacaaagataaagagaaagacaaggaaaaagaaagagaagaggaagaa
aaagagaaagatgatcaaagaaatcatgaaaaatataactcaaaccaaaaaattcagttg
tgtgttgctctgttaaaggttggtgcctgggaacacttcatggaaatttccaagcgcttt
ccagatttttacctcgtgtcgagtcctcctattggccaagcactttgccagttgatacat
gctacaattgaacctatttacagaaaggtgtgtactctacctagccggttgaaagggact
gtggttgaattgctcaataacccactggctcctcgtccttcatataactttaatgatgtt
tgtacaacaatatttccaatgctgagtgctttggggccacacttgtacattgaccctgga
ctgatgtacaaggttcttagagttgcacgggtggcactgaaacaggtgaaggttggtgct
gatggagttcgtaacaatttctattacgagttcttggatgtcttggatgaagctctctta
ccgtctctatccatgcttgatgctaatccatgtcttgcagaagagatctgggacaccatc
aagatatacccataccagcacagatacaagctttatggccggtggaaaaatgagacgtgt
aaccagcatcccatgcttataaagtatcgtgctagacttctaaagaaagcaaaatttatc
atgatgcgtatcacgaaagaaaccattaaacctgtgagtcggggaattgggaaacttact
cacaacaaccctggtccagtgtttcattatattttgatacaggttcagctctatgataat
ctcattggtcctgttgtggatagcttcaagtacctgacatctctctcgtatgatgttctt
ggatactgcattgttgaaatcctctcagaaaataaggacagaatagccaatgatgcaatg
gccatctctccttggctacagtctctttcaagtttctgtggaaccgtgtacaagaagtat
attatagatttaggaggaattcttcagtttgttgccaatcagttgaaggctgaaaaatca
attgacctgcttatcttgcgagaaattgtccagaaaatgggtggtacagatacccttgaa
gatttaacgtcagaacagcttgatgctatgtgtggaggtgaattgcttcgtcgggaggct
ggccagtatcagcaggaaagaaacacaaagaggtcttccatacgtctcaaagaagctctc
ttagagaataacttagcaattcctctgctgttacttatggctcaacagcgttcatctgtt
gtttataatcaaactgagtctcctcatcttaagttggttggaaagctttatgaccagtgc
caagatacaatggtgcaatttggttcctatctctttcaagtggtgactattgaagagctt
aatgatcgcctgccaagcattggtacccttctgtctgattgccacattaatgcagatgtt
gcatttttccttgcacgtccactttttatacatatgcttaattcaaaatatgatgaacta
agacggcaggacaagggtgagaagaagttgacactggaacagaagaagctgcgttatata
gaagcatgcaatgaagtgtttgtgcccattgtttccagcattagaccccacttcagcatt
aaagtgtgggaggacatggacccatcattcttcctgactttctggacacttacgatgtcc
gacctggaagtgcctctgcatatgtatgataaggaaattaagaaaattgatccaaatccc
tcaggaaataagcgaaagaaggaaacagatcgtttgcttgcattgaaagaaaaacttcaa
gaggaggaaaagcgccagaaggaacatgtggagcgtgttcatgctagactacaacaggaa
aaggaccgatggttcatgttacgtgctgcacgctctccaaagaatgacacagtgactgct
ttccttcagctgtgtctcttcccacgatgcaccttcactgctcttgatgctatatactgc
gctaagtttgtcaagatgttacataaccttaaaacaccaaatttttctacactcatatgc
tatgatcggatgtactgtgatataacatacactgttgcctcctgcacggaacaagaagct
cataggtatgcaagattccttctgggcactttggaaactgttatgcactggcatgcatca
caaactaattatgagaaagagtgcgcaaactaccctggatttgtcactaaataccgtgta
tcacggcaagaagcaaatgattatgtagactacgagaattaccgccatgttgttcacaag
tggcactataaaataacaaaggctttggtaacatgtcttgaaagtggtgactacattcag
attcgcaatgcaatccttattcttcaaggaatcattcagcgttttcctgctattagcaac
cttgctgcagtcattgagaagagaatagaaaaggttaaactggcagaacgtaatcatcga
aatgatctttatgttctggccaacagctactcgggcagattaaaagccatcaaacccaat
atcatgcctgaaacggaattccacatagtacctaaacgtcctcaggaagctaaggttgtt
aatggaacgcaagaaaacaccagtgcaccatcaggtggtgaatcaaaacctacagcagag
atgacagaaagtaagatcgtgaagatgatagtatctgactctactaatggagatgtggat
gctaaggatgagaaagaggataaggatatcaagaaggcagaaataaccagtaaatcttcc
aaagataaaaaagagaatttggaaaagaaacctattgatgataatgaaattaaaaaggag
gataaagagaaaaaggagaaagacagggatagagataagaaggaggacagagaagagaaa
tcaaagagaaggtccaaggagcctaagaggtcaaagtacgaggatgaggactatggggaa
tctgaacgagatgagcgaccttcaggaggcacaacagagcgggaacgggagagcagcgtc
acatccaacacatcatcaacctcaaccaagatggaaccacctgaggcttctccaagaggg
tcaaagcgacgcaagactgaacatagctccaagtgtggtagagtgccaatactacaaaga
tgtcatgcagttggtctactagcaactgctgcaacagtcgtcgagccatccggttcttta
agccgtaataaagaagagggatcacggagggaacacaagcacaaggaacgatcaaagtca
caagagccagactcagacgtgtctaccaaagaaaccaaaaaggagaagaaagaaagaaag
agggagcgctcctcagatgaagcagcagatggagagttgaaacggaaaaaaaatgatgag
agatcgaagtctaatggccggtcagatgatgatcacaagcatagacaccagcagcatcgg
gctgatagtgaggagtatcatgatcgatatgtgaatgagagtcgtggaaaagaccataga
gattatgattacgagcgtgaatatgaacgagattatgaaaagcacccatcaagtagacat
aagcgtaagaattaa
DBGET
integrated database retrieval system
