Cherax quadricarinatus (Australian red claw crayfish): 128701567
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Entry
128701567 CDS
T09502
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128701567
04131 Membrane trafficking [BR:
cqd04131
]
128701567
03029 Mitochondrial biogenesis [BR:
cqd03029
]
128701567
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128701567
Membrane trafficking [BR:
cqd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128701567
Mitochondrial biogenesis [BR:
cqd03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128701567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
GNC1_N
HEAT_2
HEAT_MROH2B_C
LTP_2
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
128701567
NCBI-ProteinID:
XP_053651311
LinkDB
All DBs
Position
78:complement(4841114..4935899)
Genome browser
AA seq
2968 aa
AA seq
DB search
MAALEKLIRAFEAVKLSQGGNGTNGGAPSMTAAGAQAGEQRPAEHPRTMASLASSLSQQS
QGLLSKKDQVLSSKEKASTCSIIADALVGAKPTEIQKLLSVGIETLLLLTADTDPDVRMN
ANESLNRVIRSLSETQLGKIQVELYKEIKKNGSVRSLRAALSRFAALCHHIRPQKGRAYV
QNLLPYVTRMARRPEEPLLETLAAALEKIMPTLGHFTNDNEIKNLLKAFLPNLSHTSSAV
RRSAVSSLTVLCRHSRKPPMFLGWLLSTILQILVPVQNDIPTSQALGCLLCLRSLVPHIG
ELCAPVIPSDTHHAHHTTHLHPAEYTVSYDQMLQVYELCLHFSKSSDHNIVTASLETLQT
LLQNPPVALLLTLTSPEGITRSRIMADPRASLLSSRVSSQISVAPSLFEEDNLLLDLEGG
SGRVSMDMDTPDEKLDFEESTKEEDDKGGGGGGGGGGGGGGIGGGGGGGGGGSGGSTEVQ
PADTAVDETDSRVSALYSSIEIGKLTDTSVLFGRGEINLNGEKRCIERDKRKHIYHISSH
SHNKSLEDKSVSIDKPSGSVGSFLDEDLPVRYLVRYLTSSFLLSGHAGLLVPDRAVRVSV
KVLALNCVGLAVMVMPSLMAEPLYTDAIGELELQQHIDDVLRFHSHSDPQLGASVGTVIG
QFIRASLVHGCGQYNDFGRPGLPLSSLLEVLCKLLVHESSVTARGALGGLGLCLGELLHS
LHAAVILSVLPHLVNTASNLYWLVKVELCDLLSGLPLSYTDHVESSSSYSTTGSSIPLRP
ADRFSHRVLTAVLIPLLADQDPRVRSAAASACVKLVPEIMSSGDLIHKVASSLVHSGCLK
GDKEDLGNNPQSLQHWSCRGLPSLPVAPLHRLFTVRNITPPECHGSAQGPAASQVSHSLS
RLIYAFTTHLMSTNSKFLMLGCVETLSQLSEKYPPALYPSAWGCHITPVQSSENKMHTGL
ITHVLSLAGESPFAGDLNVQQNILTIASNILAGIAIEVLRQGREDVVGAKAPWAFLGASQ
VTAVAECVVQHILRILCVYTHVLEDILPGSRPTLAPLTPQSTLSPIKRRSRGETTGDKNR
THSPSNGEKPDGEEKERKPLKPGPIGAFSHLPEYIKMYDVLKNAHTNYKMSLEDSTTEKV
CGLLRVALTSLGRLLEVASMVEFGKLADEMLQYLKVVTSLLPTLTVQCGQQLLKCLFGSN
VMALFDQLYRKVSEPVPHVSTDTVGSTNKRAVEEPDITGLHHLCFNIPLVELEKDLNEMS
VARKDSDQISFSLSQRKGSTSVFKTLGRGNDKLSLSSYIRLFEPLVIKALKLYTVSSDVI
MQRSVLQLLIHLVQIRVNYCLLDSDQIFIGYVIKQFEYIEEGQIKQAEELIPSMFRFLVL
LSYERHHSKSIIGVPKIIQLCDGLMASGQPPLSHCVLALQPLVEDLFLVRSTTSVTDQRE
LETQREVLCSMLLRLAHYHQVLRLISLVLSATMEAHRERWRKLSRQVIDTLLPLLSKLQV
NLDSVDSLAAVEEVMHGVCASVYRPVDCVLKALFTSPCELETTVGVERWVGSVLLLLRIL
ITHSTPELVLARLEELGLSMDYIHTETPADVVPTEASLAPEAVQRQVTDSSIRFRDPLNV
TQPETLPQVAMARFLLEVVRVSVSEIRSVRLTLLNSGLPPEGGGGHHSPDMLVHLSHHLL
LTLLHLTLSGQWREVIISLKDICSREVELAEEISEALLFVSGWYPPLTLLWCKLLTCLDL
TSQNLWTRVLRTCQRKSVTSVSSSVVSEASGPSSCLSLEFLRRCGLLVFSEFVVRHMQEG
EWLTWLVVQHISDVVILHVEPPIHTLIQSIHGSPAASALLIQAIHARCEYVQKAEYGGHI
ISLVSGVHISQSGALITFIVERLLALPYLVVTRAACALATQRLHLLLAMPPGQVLIQLPL
EDLTKISSYMKENNLEKRYGQLYGLLQRLLNQVHGVHVPQSSEASLPTQYHHSPTTTTTR
LDLNWYLQLVRNRCMQGEGGGLECGQLLSQLEYSEIINIMSGKTFNAAMLTHTLRLGLTT
TLQANRDWGDCNSSVETGDSEECSSGSGTGEAPLYTASKVILLQHLAQVAGSLPRPHHTF
TPGGGNKYSERVCKLLSGDDGIGSVVDTLAPAVVEYLTSMTRLPWGAQVLPDNSEHILRF
ALLAMEYLHWQVWLGSVSVEVASLCLNCVDAVLRCGTLSGLLGLPDRISYVCSMVAALHA
AASYLVKPRALPSLPPSLTQCLNGVESSLLVACRRLMQLVSWLEAGNLRHLPACIAYPIR
GIVMGLGRMPVVNSIVRIPPDMWRLGWAPQFFGEHGTNLPPIQVEFLQETDVLKQFIFRM
ELFGWIGRQQFEETWMALLSVLNSTPSENTPAEELPFINLSLSLAVRGITALLVQTLLLP
TPGNPHSGNLLSIPRDKPPHYLTSKSGRKLQEIMSCLHEKLREVQHLIKGGPRQTPPYQL
GQVSVEYLVTALNSHAEPPESPDTILHTGCYEFEIRERQLASCGLDVQSCLHFLHYLYSS
WLRPQSGLCASVVAEVVKSVSCLCDLFCSSAHHRWVLEALLPLHTLHPIEDHITQQHIIL
ATCKALATLRLAKQEVSSSLSEGVIHIVESGLKSGQVSVRTCAVQGLLYLLQGPSEESPP
LIVLAANYILKYNDGKSRECESHEVAVWEVWVYLVEHYETLPDPTLPSTALHMALSTAAT
SSTTPRLLHQVLKGVERLVLVQQLSSNTVEVIFKLVMDLVLNGSPSTSLAALPLFITALY
ANVRNTASLTHGVAQDDMASDPETLLLVMEKLSIFFDRIRVGYPHEAGVIAGLLGPCLLD
VLPASQILNKVITEYISSHQPHPHLLASTLFQVFEGAISESGEGLVQEWVLLSLSNFTQR
SPISLAVWCLTCFFIAASSNRWLRAAFPSVQARLGKLDVRDIQIFCLAASHFRQSLATEN
QRAKFEAVFQAVATPGSPFQELLDCIQD
NT seq
8907 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccttgagaagttgattcgtgcctttgaggcagtaaaactgtcccagggaggc
aatggtacaaatggaggtgctccctcaatgacagcagctggggcccaggctggcgagcaa
cgccctgcagagcaccccagaactatggcctcgctagcatcgtcactgtcacagcagagt
cagggattgctcagtaaaaaagatcaagtactgagtagcaaagagaaagcttccacatgt
tccatcatagctgatgcactagttggggctaaacccacagagatacagaagttgctctca
gttggcatagagactttgctgctgctgacggctgatacggatccagatgtcaggatgaat
gccaatgagtcactgaatagagttatcagaagtctgtcagaaactcagttgggcaaaatt
caagttgaactgtacaaggaaatcaagaagaatgggtcggtgaggagcctgcgggcggct
ctgtctagatttgctgcactgtgccatcacatcaggcctcagaaaggtcgagcctacgtt
caaaaccttttaccatacgtgacacgaatggctcgccggccagaagaacccctgttagaa
acacttgctgctgctcttgaaaaaattatgccaactcttggtcatttcactaatgacaat
gaaattaagaatcttcttaaggcatttcttcccaatcttagccacacctcctcggctgtc
cgccgctcagccgtatcctctctcacagttctctgccgtcattctcggaagccgccaatg
ttcctgggctggctgctgagcaccattctgcagatcctggtaccagtccaaaatgatata
ccaacaagccaagctcttggctgccttctgtgcctacgctcattggtgcctcatataggg
gaactatgtgctcctgttataccctcagatacacaccatgcacaccataccactcatcta
cacccggcagagtatactgtctcatatgatcagatgcttcaggtttatgaattatgtctt
cattttagcaaatcttcggatcacaacatagtcactgcaagtttagaaacacttcagaca
ctgcttcagaacccaccagtagctctcctcctgactctcacttctcctgaggggatcaca
cgctcgaggatcatggctgatcctcgagctagtctgctttcatcaagagtgtccagtcag
atcagtgtggctccatcactgtttgaagaggataacttattattagatctggaaggtggc
agtgggagagttagtatggacatggacacccctgatgaaaaactcgattttgaggagagt
acaaaagaagaagatgacaaaggaggaggaggaggaggaggaggagggggagggggaggt
ggaataggaggaggaggaggaggaggaggaggaggaagtggaggaagcacagaagtacag
ccagctgacactgctgtagatgaaactgatagtagagttagtgctttatactccagcatt
gaaattggaaaacttacagatacctctgtgctttttggtagaggagagataaatttaaat
ggtgagaaacgttgcattgaacgtgacaagaggaaacacatttaccacatatcatctcat
tctcataataaatccctagaagacaaatcagtctccattgataagccaagtggttcagtt
ggctctttcttggatgaagatcttcctgtacggtatctcgtacgatacctgacttcctca
ttccttttatctgggcatgctgggttattagttcctgaccgggcagtccgagtgagcgtc
aaagtgttggctcttaactgtgtagggttggctgtgatggtgatgccttctctgatggct
gaacctctctatacagatgcaattggagaattggagctacagcaacacattgatgatgtt
ttgaggtttcatagtcattccgaccctcagcttggagcaagtgtgggcactgtcattgga
cagttcattcgtgccagtcttgtccatggatgtggacagtataatgactttggtcgaccg
gggttacctttatcttcacttcttgaagtcctttgcaagttgcttgtacacgagtcaagt
gtaacagcacgtggagctctgggtggtctggggctctgcctgggtgagctacttcactcg
ttgcatgccgcagtcatactgtctgttttaccgcatttggtaaatacagcctcaaatcta
tattggttggtcaaagttgaactgtgtgatctcctctcaggattgcctctgagttataca
gaccatgtagagagtagcagcagctacagcactacaggaagttccattccacttagacct
gccgacaggttttctcatcgtgtattaacagcagttcttattcctctcctggccgatcag
gaccccagagttcgttcagcagctgcttcagcttgtgtcaaattagtacctgaaataatg
agcagtggagacttgatacacaaagtggcttccagtcttgtgcatagtggctgccttaaa
ggggataaagaggatttgggaaataacccacaatcacttcaacactggtcttgtaggggt
cttccctcgttgccagttgcaccacttcatcgtctctttactgtgagaaacattactcca
cctgaatgccacggttcagcacaaggcccagcagcatcacaggtgtcacattctctctca
cgccttatctatgcattcactactcacttaatgagtaccaatagcaagtttttaatgctt
ggatgtgttgagaccttgtcgcaactcagtgagaagtatcctcctgccctgtacccatca
gcatggggttgccacattactccagtgcagtcaagtgaaaataaaatgcatactggactg
atcacccacgttctctccttggctggagaatctccatttgcaggagatctaaacgtacaa
cagaacattctcacaatagcttcaaacattcttgcaggtattgcaattgaagttttaaga
caaggcagagaagacgttgtaggagctaaggcaccatgggcattcttaggggcatcgcag
gtgactgctgtggcagagtgtgttgttcagcacatcctgcgtatactatgtgtatacacc
catgtgttggaagatatcttaccaggttcaaggcctacacttgctcctcttactccacag
tcaacgctttctccaattaaaagaagatcaagaggagagactactggtgacaagaaccgc
acacattcacctagcaatggagaaaaacctgatggtgaagagaaggagaggaagccgctg
aaacctggacctattggagctttctcacacttgccagagtatattaaaatgtatgatgtg
ctcaaaaatgctcacacaaattataagatgtccttggaagatagtacaacagaaaaggtc
tgtggattgctcagagtggccctcactagcctggggagactcttggaagtggcatcaatg
gtagaatttgggaaacttgccgatgagatgcttcagtacctgaaagtcgtcacgtctctc
cttccaacactcacagtgcagtgtggacagcagcttctgaagtgcttgtttggttcaaat
gtgatggcactctttgaccagctataccgcaaggtttccgagcctgtgccccatgtgtca
acagatacagttggaagcacaaacaaacgggcagtggaggagcctgatattactggtctc
catcatctttgtttcaatattccactggttgaactggagaaagacctgaatgaaatgtct
gtggccaggaaagacagtgaccaaatcagttttagtctgagtcaacggaaaggaagcact
agtgtcttcaagaccctgggacgtggtaatgataaattatcattgagttcttacataaga
ctttttgaaccattggtcatcaaggccttgaagctgtatacagtatcaagtgatgtcatc
atgcagagatcagtcctgcagctgctgatccacctcgtacaaattcgtgtcaactattgc
cttttggactccgatcagatatttattggttatgtgatcaagcaatttgaatatattgaa
gaaggacaaatcaagcaggcagaggagttgattccctccatgtttcggttcctagtactg
ctgtcttatgagcggcatcacagcaagagtatcattggggttcccaagataattcagctt
tgcgatggtcttatggctagtggtcagcctcccctatctcactgtgtattggcactacaa
ccactagtggaggatctcttcttggtgcggagcacaacgagtgtgactgatcaacgtgag
cttgaaactcaacgagaagtcctctgctcaatgctcctaagacttgcacattatcaccag
gttcttcgccttatctccctggtgttaagtgctacaatggaagctcacagggagcgctgg
aggaagctctcacgacaagtgattgacacgctgcttccactcttgtccaagttgcaagtt
aatcttgattccgtggattcccttgcagccgttgaagaagtaatgcatggagtgtgtgcc
agtgtgtatcgtcctgttgactgtgtactgaaggctctctttacttctccttgtgaacta
gagactacagtgggtgtagagagatgggtgggcagtgtgttgctgctgcttcgtattctt
ataacccactctaccccggagttggtgctggcacgcctagaagagctgggcctcagtatg
gactatatacatactgaaacacctgcagacgttgttcctacagaggcttccttagcgcca
gaggctgtacaacgacaggttacagattcgtcaattcgttttagagatcctctgaatgtt
acccaaccagaaactcttccgcaagtagccatggccagatttttgctggaggttgttcgt
gtgagtgttagtgagatcagaagtgtgcggctcaccctgctgaacagtggactacctccg
gaaggtggaggtggacatcattctcctgatatgttggttcatctgtcacaccacttgctg
ctcactctcttgcatctgaccctctcaggtcagtggagagaagtgataatttcactgaag
gacatttgtagcagggaagttgaattagctgaagaaattagtgaagctctgctctttgta
tcaggctggtatcctcccctcacactgctctggtgcaagctactcacctgtcttgatctc
acttcccagaacctatggacccgtgtgctcagaacctgccagagaaaatcagtcactagt
gtaagtagttctgttgtgagtgaagcaagtggaccttctagctgcttgtctttagaattc
ttaagaagatgtgggcttcttgtgttctcagaatttgtggttcgtcacatgcaggaagga
gagtggttaacttggctcgttgtgcagcacataagtgatgtggttattctccatgtggag
ccaccgattcatacgctcattcagtccatccatggatctccagcagcctcagcacttctc
attcaggccatccacgctcgctgtgaatatgtccaaaaggcagagtatggtgggcacata
atttcactggtgtcaggagttcatatatcacagtcgggagcacttataaccttcatagtg
gagcggctgctagcactgccgtacttagtagtgacgcgggctgcctgtgcattggccact
cagcgattgcacctcttgctagccatgcctccgggacaagttctgattcagcttcctctg
gaagatcttaccaaaatttctagttatatgaaggaaaataaccttgagaaacgatatggg
cagttgtatggcctactacaacggctcttgaaccaggtccatggtgtccatgttcctcag
agcagtgaggcctcattacccactcagtaccaccatagtccaacaactaccactactcgt
ttagatctcaactggtacctgcaacttgtaagaaacagatgtatgcagggagaaggaggt
gggctggagtgtggccagctgttgagtcagctggagtatagtgaaattatcaacattatg
tctgggaaaacattcaatgctgccatgctgacacacaccctgagattgggacttaccact
accctacaggccaacagagactggggtgattgtaacagttcagtggagacaggtgacagt
gaagagtgcagcagtggtagtggcactggggaagctcccttgtacactgccagcaaagta
atattgcttcaacatctagcccaggttgctggctccttaccacgcccacatcacaccttc
accccaggtggaggaaacaaatacagtgagcgagtgtgcaagctgctgtctggcgacgat
ggtattggtagtgtggtggatacactggctccagctgtagtggagtaccttacttcaatg
acacgtcttccctggggtgcccaggtcttgccggacaactcggagcatatactgcggttt
gctctcttggctatggagtatctgcactggcaagtttggctaggcagtgtgagtgttgag
gtagccagtctgtgcctaaactgtgtggatgctgtcttgcgttgtggtactttatccggc
ctgttgggtctacctgaccggatatcttatgtctgttctatggtggccgcccttcatgct
gctgcctcttatctcgtcaaacctagagcacttccaagtcttccacccagcttgacccag
tgtctaaatggagtagagagcagcctgctggtggcttgccgaagactcatgcagctggtg
tcatggctggaggctggcaacttgcggcatcttccagcttgtattgcttacccaatcagg
ggcattgtgatgggtttggggcgcatgccagtggtgaacagtattgtgagaatacctcct
gacatgtggagactaggttgggctccacagttcttcggagaacatggtacaaatttaccg
cctattcaggtagaatttctgcaagaaactgatgttctcaagcagtttatatttagaatg
gaactttttggttggataggacggcaacaatttgaagagacctggatggcactgttatca
gtgctaaattctactcctagtgagaataccccagcagaggaactacctttcattaatctg
agtttgtcgctggccgtacgaggaatcactgcacttttggttcagacccttctattaccc
acacctggcaaccctcacagcggcaacctattaagtatcccaagagacaaacctccacac
tacctgacttctaagtcagggcggaaacttcaagagattatgtcgtgtcttcacgaaaaa
ctacgagaggtacaacacctaatcaaaggaggaccgcgacagaccccaccatatcagctg
ggccaggtgtcagtcgagtatctagtaacagctctcaacagtcatgcagaaccaccagaa
tctcctgacactatcttacacactggctgttatgagtttgaaatacgagagagacagtta
gcgagctgtggtcttgacgtccagtcctgtcttcacttccttcactacctgtattcctca
tggctgcgaccccagagtggcttgtgtgcgtctgttgtggcagaagtagtaaagtctgtg
agttgtttatgtgacttattctgctcaagtgctcaccaccgctgggtcctggaagcactt
ctgcctctccataccctccaccctattgaagaccacatcacccagcagcacatcattctg
gctacctgtaaagctcttgcaactcttagattggccaaacaggaggtgagctcatcactg
agtgaaggtgtgatacacatagtggagagtggactcaagagtggacaggtgtctgtacgt
acctgcgccgtccaaggcctcctctaccttctccagggaccatcggaggagagcccgccc
ctcattgttctggctgctaactacattctcaaatacaatgatgggaagagtcgagaatgt
gagagtcatgaggtggccgtgtgggaggtgtgggtttatttggtagaacactatgaaaca
ctacctgatcccactctgccatctactgctctccacatggccctttcaacagcagccact
tcttccacaactccacgtctcctccaccaagtcttgaagggtgtagaaagactggtgtta
gttcagcaactctccagtaacactgtagaagtgatcttcaaattagtgatggacttggtt
ttaaatggttctccttccacctctttagctgccttgccattattcatcactgctctttat
gctaatgtaagaaacactgcatctcttacacatggtgtagcacaagatgacatggcatca
gacccagagactctcttacttgtcatggagaaactctccatattttttgaccggattcgg
gttgggtatccccatgaggcaggtgttattgctggtctgcttggaccatgccttttagat
gtccttcctgctagtcagatactgaataaagtgatcacagaatatatttctagccatcaa
ccacatcctcatctactcgcctcaacccttttccaggtatttgaaggggctatcagtgag
agtggggaaggtttagtacaagaatgggttctactttcgcttagcaacttcacacaacgt
agccctatttcccttgcagtttggtgcttaacttgcttcttcattgcagcctcgagtaat
agatggctccgagcagcttttccttccgttcaagcacgtctgggaaaactggatgttcgt
gacatccagatattttgtctggctgcttctcatttccgccagagtttggcaacggaaaac
cagagggcaaagtttgaggcagtgttccaggctgtggctactccaggatcaccatttcaa
gagttattagattgtattcaagattaa
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integrated database retrieval system
