Cherax quadricarinatus (Australian red claw crayfish): 128702259
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Entry
128702259 CDS
T09502
Symbol
pAbp
Name
(RefSeq) polyadenylate-binding protein 1A
KO
K13126
polyadenylate-binding protein
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03015
mRNA surveillance pathway
cqd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128702259 (pAbp)
09123 Folding, sorting and degradation
03018 RNA degradation
128702259 (pAbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128702259 (pAbp)
03041 Spliceosome [BR:
cqd03041
]
128702259 (pAbp)
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128702259 (pAbp)
mRNA cycle factors
Stress granule specific factors
128702259 (pAbp)
Spliceosome [BR:
cqd03041
]
Complex C
Other components
Complex C specific factors
128702259 (pAbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RBD_RDR6
RRM_5
RRM_Nup35
Nup35_RRM_2
RRM_MARF1
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
128702259
NCBI-ProteinID:
XP_053652406
LinkDB
All DBs
Position
83:5729618..5755025
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AA seq
646 aa
AA seq
DB search
MNPSGPSYPLASLYVGDLHADCTEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVMKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS
AFGNILSCKVATDEAGNSKGYGFVHFETEEAARNAIQKVNGMLLNGKKVYVGKFIPRAER
EKELGEKAKRFTNVYVKNFGDDLDDEKLYEFFSAFGKITSHRVMCNEDGKSKGFGFVAFE
EPEAAEKACDEFNGKEMNGKQIYVGRAQKRGERQAELKKKFEMMKIERMNRYQGVNLYIK
NLDDTIDDERLRKEFSNYGTITSAKVMTEDGRSKGFGFVCFSTPEEATRAVTEMNGRILV
SKPLYVALAQRREDRKAHLASQYMQRVAGMRMQQMGQMFQPGGTSYFMPTMPQAQRFYTP
QMAQIRATPRWPAQPATQVRAGAQATTAFPMQAAPFRSAPRQAQPGPRSVRPMAAAAAAA
QQQQMPNLLQAARPVAPNAGVPPPTALSNAARASNYKYTNNMRNPPAVSGGGPAAAAAVA
PVSQPAVHIQGQEPLTPSMLASAMPQEQKQMLGERLFPLIREIYPELAGKITGMLLEIDN
SDLLHMLEDRNSLKAKVEEAVAVLQAHQAKQQVVAVAVAAQKKEDM
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctagtggccccagctatcctctagcctccctctatgttggggacctccatgct
gattgtacagaagctatgttatttgagaagttctcctctgctggccctgtgttgtccatc
cgtgtgtgcagagacatgatcactcgtcgctccctaggctatgcatatgtcaactttcaa
caacctgcagatgcagaacgtgcactagacacaatgaattttgatgtcatgaagggtcgt
cccatccgtatcatgtggtcccagcgtgatccttcccttcggaaatctggtgttggcaat
gtgttcatcaaaaatttagacaagtctattgataataaggccatgtacgacaccttctcg
gcctttggaaacattcttagttgtaaggttgctactgatgaggctggaaattctaaaggt
tatggttttgttcattttgaaactgaggaagctgctagaaatgccatccaaaaagttaat
ggtatgttgcttaatggcaagaaagtatacgtagggaagttcattcctagggcagagcgt
gagaaggagttgggagagaaggcaaaacgtttcactaatgtgtacgttaagaacttcggc
gatgacctagatgatgaaaagctctacgaatttttctcggcatttggtaagattaccagt
catagagtaatgtgtaatgaggatggcaaatcaaagggctttggttttgttgcatttgaa
gaaccagaagctgctgaaaaagcctgtgatgagtttaatggcaaagagatgaatggaaaa
caaatttatgtgggaagagctcagaagaggggcgaacgacaagctgagctgaagaagaaa
ttcgagatgatgaaaatagaacgcatgaacaggtaccagggtgtgaacctttatatcaag
aatctagacgacaccattgatgatgaaagactgcgcaaggaattctccaactatggtaca
atcaccagtgccaaggtgatgactgaagatggccgttcaaagggctttggatttgtctgc
ttctcaaccccagaagaagccacccgtgctgttacagagatgaacggtaggatcttggtc
agcaagcctctgtacgttgccttggctcaacgtcgtgaagatcgtaaggcacaccttgct
tcgcagtacatgcagcgtgttgctggtatgcgcatgcagcaaatgggacagatgttccaa
ccaggtggcacaagttacttcatgccaaccatgcctcaagctcaaagattctatactcca
cagatggcccagatcagagccacaccacgttggcctgcacaacctgctacacaggtgcga
gcaggtgctcaagcaaccactgcattccctatgcaagcagcacccttcaggtctgctcct
cgtcaagcacagccaggtccccgcagtgtccgtcctatggctgctgcagctgcagctgca
cagcagcagcaaatgccaaatttgctgcaggcagctagacctgttgcaccaaatgctggt
gttccaccacctactgctctctccaatgctgcaagagcttccaactacaagtacaccaac
aatatgcgtaatcctcctgcagtttcaggtggtggtccagctgctgctgcagctgttgcc
ccagtttcccaaccagctgtgcatattcagggtcaggagccacttacaccatcaatgttg
gcttctgctatgcctcaagaacaaaaacaaatgttgggagaacgtttgttcccccttatt
cgtgaaatttaccctgagcttgccggcaagattactggcatgctgttggaaattgacaat
tctgacctccttcatatgctggaagatcgcaattccctgaaggccaaggttgaagaggct
gtggcagtgttgcaggctcatcaagctaaacaacaagttgtagctgtggcagtagcagcc
cagaagaaggaagacatgtaa
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