KEGG T09502: 128702962

Cherax quadricarinatus (Australian red claw crayfish): 128702962

Entry

128702962         CDS       T09502

Name

(RefSeq) roquin-1 isoform X1

K15690

RING finger and CCCH-type zinc finger domain-containing protein

Organism

cqd Cherax quadricarinatus (Australian red claw crayfish)

Brite

KEGG Orthology (KO) [BR:cqd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cqd03000]
    128702962
   04121 Ubiquitin system [BR:cqd04121]
    128702962
Transcription factors [BR:cqd03000]
Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    128702962
Ubiquitin system [BR:cqd04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    128702962

SSDB

Motif

Pfam:

Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4 zf-C3HC4_4 Prok-RING_4 zf-CCCH_UNK zf-C3HC4_2 zf_CCCH_4 Vesi_VP2

Other DBs

NCBI-GeneID:

128702962

NCBI-ProteinID:

XP_053653430

LinkDB

Position

86:5860127..5933960

AA seq 973 aa
MPIQAPQWTEFLSCPICCHEFDSGQRGPISLGCGHTVCRACLAKLQRNQCPYDQTVMRLE
LDQLPVNGALLSLVGAGTSAEEGELPPPPPVPTTHTRNYFMAVKCIKDLALFLKPFSVIS
LVGSGTNGSTSLLSRPMQRKLVTLINCQLVEDEGRARAVRAARSLGERTVTELILQHQNH
QQLSANLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQ
ASKTSIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGL
RIAPDQWSSLLYGDTVHKSHMQSIIDKLQTPQSFGQSVQELVIALQRTGDPGQLSSLRPQ
LELLAALDPSPDAPPPGWKPCAAAMEAVRAVVTGLVHFIQHHGNRKMPDAHHPHNAKYKT
SMCRDLTQRGGCPRGNNCTFAHSEEELEKYRNRSRKHGKGIPQPPTTPAIKSQVQHHQPQ
QHPTQTQQQAQHPQGSMEAVITAKNGEHPPVAVIQKTGTVEEIMQSGEVPTTPTPFDPHK
FVHIPTHTQSMPVLPAQTPAPAIIQPALAATPFHAAPMAEYTYSSFPCQPPVFAQASPQQ
PIPSAPAAVFPGQAAAIVPDIYGGNAPTMLLNTAPVYNVTGHASEFCIPIANTKPTNSGL
HPLVSCWPDTNCTTFCVNTTVTTTSLTTATNVASKSMEELKERKEAILNQLETIVGKEAT
HQVATQIANGEEPSKPQEFTSTYSIWTSGADFYIASKSIEKSYDPSTGYRTYTARKDDSK
GKDDFIPFDPPLVSRFGPISRMSRTVIQPANPIQSSASNPTETTTTPTVRRPVPTISPMP
QVLYQPGGYTVGVMTCIPTPLEHMNTLGHGIVDPLLTQLETSGIRTISADAAQQECLRQQ
FTAVREGIDAIVLDEKRMAEWQEVRLKEELSLVMNRIEVKRKEMEARNASRDVCENNFEE
LEKKWQFDFVGNE

NT seq 2922 nt +upstreamnt +downstreamnt
atgccgatccaggcccctcagtggaccgagttcctgtcatgtcccatttgctgccatgag
ttcgatagtggtcagcgtgggccaatcagtttgggatgtggacacaccgtctgtcgtgct
tgcctggccaagctgcagcgaaaccagtgtccttatgaccagactgtgatgagattggag
ctggaccaacttcctgtaaatggtgcattgctttcactggtgggggctgggacgagtgca
gaggagggggagctaccccctcctccgccagtgcctacaactcacactcgtaactacttc
atggctgtcaagtgtatcaaagatcttgcactctttcttaaacccttctcagttatctct
cttgtaggctctggaacaaatgggtccacttcacttctgtcccgtccaatgcaaaggaag
ctagtcaccctcatcaactgccaacttgtggaagatgaggggcgggccagagcagtccgt
gctgctcgatctctgggtgaacggactgtgaccgagctcatactccagcaccaaaatcac
caacagctctcagctaacctctgggcagcagtgagggccagaggatgccagtttctgggg
ccagctatgcaagaagaagtgttaaagctagttcttttagctcttgaagatggttcagct
ctttcacgaaaggtgctggtgatgtttgtggtgcagcggctggaacctcatttcccgcag
gcctccaagacaagtatcggacacgttgtgcagctactctaccgtgcttcttgctttaag
gtttcaaaaagagaaggtgactcatcactcatgcagttaaaggaagaatttagaacttat
gaagccttgagacgagaacacgatgcccagatagtccaaattgcaacagaagccggcctt
agaattgcaccagatcagtggtcgtctctcctctatggtgacactgtccataaatcccac
atgcagtctattatagataagcttcagacaccacagtcttttgggcagtctgtacaggaa
ctggtaatagcactacagagaacaggagacccaggtcagttatcctctttaagaccacaa
ctagaattgttggcagccttggacccttccccagatgctcctcctcctggttggaagcct
tgtgcagctgcaatggaagctgttagggctgttgttactgggctggtacattttatacag
catcatggcaatcgaaaaatgccagatgcacatcacccacataatgctaagtacaagacc
agcatgtgcagagacctaactcagagaggaggatgcccaaggggaaataattgcacattt
gctcactccgaagaggaacttgagaaatatagaaatagaagtcgcaaacatggcaaaggc
attccacaaccacctacaactcctgccatcaaatcacaggtacagcatcatcaacctcag
cagcatccaacacaaactcagcaacaagcacagcatccacaaggaagcatggaagcagtc
ataactgcaaaaaatggtgaacatccacctgttgcagtcattcagaaaacaggtacagtt
gaagagattatgcaaagtggggaagtgcccacaactcctactccatttgacccccacaag
tttgtgcatatcccaactcatacacagtcaatgccagtgttacctgcccagactcctgcc
ccagcaattatacaaccagctctagctgcaacaccttttcatgcagcaccaatggctgaa
tatacatacagttccttcccatgtcaacctccagtattcgctcaggcatcaccacaacaa
cctataccttcagcaccagctgctgtttttccaggccaagcagcagcaatagttccagac
atatatggtgggaacgctcctacgatgcttctgaacacagctccagtttataatgttact
ggccatgcaagtgaattttgtatcccaattgccaatacaaaacccaccaattcaggactt
caccctttagtttcctgttggccagatactaattgtacaacattctgtgtaaatactaca
gtaacaactacatctttgacaacagcaacaaatgttgcatcaaaatcaatggaagagtta
aaagaaaggaaggaagccattttgaatcagctcgagacaattgttggaaaagaagcaaca
caccaagttgctactcagattgcaaatggtgaagagcccagcaaaccacaagaatttaca
tctacgtatagtatatggacatctggtgctgatttttatattgcttccaaatctatagaa
aaaagttatgatccaagtacaggttaccggacttacactgccagaaaagatgactcgaaa
gggaaggatgattttatcccttttgatccaccattagtgagtcgttttgggcctatctct
agaatgtcaagaactgtgattcagcctgctaatcctatccaatcttcagcaagtaaccct
acagaaactaccaccactccaactgttagacgaccagtacccactatttcaccaatgcca
caggtactgtaccagcctggaggttacacagtgggggtaatgacctgtatccccacacct
ctggagcacatgaacaccctgggtcatggcatagtcgaccctcttctgactcagcttgaa
acttcaggtatcagaacaatatctgcagatgcagctcagcaagaatgcttaaggcagcaa
ttcactgctgtacgtgagggaattgatgccattgttttggatgaaaagaggatggctgag
tggcaagaagtacggctgaaggaggaactaagtcttgtgatgaaccgaattgaagtcaaa
cggaaagaaatggaagctaggaatgcctctagggatgtatgtgaaaacaattttgaagaa
cttgagaagaaatggcagtttgattttgttggaaatgagtga

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