Cherax quadricarinatus (Australian red claw crayfish): 128703155
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Entry
128703155 CDS
T09502
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128703155
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128703155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
128703155
NCBI-ProteinID:
XP_053653701
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All DBs
Position
85:12049885..12275583
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AA seq
1251 aa
AA seq
DB search
MVCEEGVVSSVVGGGGGGGGGVYPDLEVVGSVSWWCSPPQPPPCSSHHNTMTIVSTYSLD
VVPLVVGERGVVGGCLLTAMSGVEAEPQAAPSPPPLPTHTAAHPPIDKHQHDPCIVSEGV
PGVVGRSRRKLENEDSSYDSDFEPCERTEDDEHEDVCRTVSDTLCAEYAEYVTLHSPSTT
TTTATTTSTTTAAATTITPTTVSLATSTTTTTTSSTTPSVITASSNTASVTAATTASVTT
GTATTASVTTATATTSSATTATATTASVTTATATTASVTTATATTASVTTATATTASVTT
GTRVTKSTSTPCTGSGGKNSHFSVRCASPVVRVCSAPAVSVTPPAITTAVTPPVTSTTIM
TIAQSTPASNTSAVATSVTSSTVSTPVCSPIADQPGGLAWVVLRPSYASQVEFGVKLGYS
ESLVQMALVKLGGTPDKDELLAELIRLGTSVPRGDGDADSSDDVTDTKEDVEQQQQQPLK
PIIIDGSNVAMSHGNKTTFSCSGLRVCVDWFRARGHTEITVFVPAWRKEAPRWDTPIADQ
DVLLELERERVLVFTPSRVCGGKRIVSYDDRYILKEAMTSGGVVVSNDNYRDLAAESTSF
RRVIEESLLMYSWVNGRFVPPDDPMGRSGPTLDVFLRRSTRDKQAPCPYGRKCTYGNKCK
YMHPERGTAPLKSVTERLQEQAQRHYQSKASSRDSSPGEGLRGKSLSLPVGIAETDVTKK
PLARTQSIVPSVSLTLPSALTQETPTHDLGPNTTSASSHSHHHLMPPHLDTRPLDPLRSS
TMYNSDSSLYHIYPSQSSQTNYGSSTWWKGQGNELTMRSMTSSQGAPPQSQSQMYGPHLS
VTKQMSDPDPAASDNPHRKLQRQLTLNPAYDSRLYKIVGFREPAPEHFPLASSGQQQTAG
QGSPSRTMNRDNEALAFSQVQSGMTERLSPGYSSPYGSREQLPAGMHPPLARHSSQECAK
HMPSLPPHLYPTYSHPNVTRFASAPDSIWGGHQQAAPGPPQITRLNSTSDTRLNVYSSSD
SHFFSDVFDEQLARLPQFHSVGPQHSASPGPGAPSPGPICSRPMSPQQGPVLHHSPSVSP
RQHTPPQQQQQSMGHTSNFPSPIPGTTSHEDARLHVFYHLSNLFPEAQVRAVLAVYPEET
DPQKICNYILARNPGPVGSRPMSPQQLPQSGVGHQSQGVPVRGSSPLSAGFSSSLPTAAS
SHEDARLRIFYHLSQLFPVAQVRAVLARYPEETDAKQLCATLLSHLSGNQS
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggtttgtgaggagggtgtagtgagcagtgtggtaggaggaggaggaggaggaggtgga
ggggtgtacccggatctggaggttgtgggtagtgtgtcatggtggtgttccccccctcaa
cctccaccatgctcctcccaccataacaccatgactattgtctcaacatactctttggat
gtggtgcccctggtggtgggtgagcgcggggtagtgggcgggtgcctgctgaccgctatg
tccggggtggaagcagaaccacaggctgccccttcaccgccccccttgccaacccacacc
gccgcccacccgcccatcgataagcaccagcatgacccttgcatcgtcagcgagggcgtg
cctggggtggtgggcagaagtagacgcaagctggagaatgaagacagcagctatgatagt
gacttcgagccctgtgaacgtactgaagatgacgaacatgaagatgtgtgtcgaaccgtg
tctgacactctgtgtgcagagtacgcagagtacgtcaccctgcatagtccctctaccacc
accactactgcaacaaccacctctactaccactgccgctgctaccactatcactccgact
actgtcagcctcgctacaagcaccactaccactaccacctcatccactacaccgtcagtc
attacagcatcatccaacacagcctccgtcaccgcagcaacaacagcctccgtcaccaca
ggaacagcaactacagcatctgtcactacagcaacagcaactacatcatctgccaccaca
gcaacagcaactacagcatctgtcaccacagcaacagcaactacagcatctgtcaccaca
gcaacagcaactacagcatctgtcactacagcaacagcaactacagcctctgtcaccaca
ggtacaagagtcacaaagtccaccagcacaccatgtacaggcagtggaggcaaaaacagt
catttcagcgtgagatgtgcatcaccagtagtgcgagtgtgttcagcaccagctgtgtca
gtgacacccccagctatcaccaccgctgtaacaccaccagtcaccagcactaccataatg
accatagcacagtctaccccagcgtccaacacatctgcagtggctacatctgtgaccagc
agtactgtcagtaccccggtatgcagtccaatagcggaccagccagggggattagcgtgg
gtagttctgcgtcccagctatgcttcacaggtcgaatttggtgtcaaactgggttactcc
gagtctctggtgcagatggcgctggtcaagctgggaggcacgccagacaaggatgagctt
ttagctgagcttatacgtcttgggaccagcgtcccccgaggcgatggagacgcagattcg
tcggatgacgtgacggacaccaaggaagatgtggaacagcaacagcagcagccgctcaaa
cctatcatcatagatggcagcaacgttgctatgagtcacggcaacaagacaactttctca
tgtagtgggctgcgtgtgtgtgtggactggttccgtgcccgcggccacactgagattacc
gtcttcgtgccagcctggaggaaggaggcgccccgctgggacacgcccatcgctgaccaa
gatgtacttttggaattggagcgagaacgtgtcttggtatttacaccttccagagtatgt
ggcggcaaacgtatcgtatcctatgatgaccgctacatactcaaagaggcaatgacttct
ggcggcgttgttgtcagtaatgataactatcgtgatttggctgcagaatccacatccttc
cgacgggtcatagaagaaagtttacttatgtactcttgggttaatggtcgctttgtacct
cctgatgatcctatgggaagaagcggaccaactcttgatgtgtttctacggcgaagtacc
agagacaagcaggcgccttgcccttatggacgaaaatgtacttacggtaacaaatgcaag
tatatgcatccagagcgaggtacagccccactgaagtctgtgacagaacgactgcaagaa
caggcacagaggcactaccaaagtaaagccagtagcagagactcatcaccaggcgaaggt
ctccgaggcaagagtttatcactaccagtaggtattgcagagactgatgtaactaaaaag
cctttagcacgcacacagtcaatagtgccatcagtgtctcttactttgccatcagcactt
actcaagagactccaactcatgatctaggacccaacaccacatctgcttcatcacactct
caccatcacctcatgcccccacatctggacacacgcccacttgatccactacgttcttca
actatgtataatagtgattcatctctctatcatatttatccttcccagagttctcagact
aactatggatcatctacatggtggaagggtcaaggaaatgaattaacaatgaggtcaatg
accagttcacaaggagccccacctcagagtcagtcccagatgtatggccctcatctttca
gttacaaaacaaatgtctgatccagatccagctgcatctgataatcctcatcggaagtta
caacgacagcttacactgaatccagcatatgattctcgcctttacaaaatagttggtttc
agagaacctgctccagagcactttcctcttgctagttctggtcagcagcagacagcagga
caaggttctccaagtaggacaatgaaccgtgacaatgaagcgttggctttctctcaagtg
caaagtggcatgacagaacgtctgtctccaggatattcctcaccatatgggagccgagag
cagctaccagcagggatgcatccacctcttgcccggcactcatcacaagaatgtgccaag
catatgccttctttacctcctcatttgtaccccacttattcccatcctaatgttacacgc
tttgcctctgctccagactcaatctggggaggacatcaacaggcagctcctgggccacca
caaatcacacgcttaaattcaacatctgacacaagattaaatgtgtatagtagtagtgat
tcacatttcttctctgatgtttttgatgagcagttggcacgtttaccacagttccattct
gtgggccctcagcatagtgcaagtcctggcccaggtgctccttcaccagggccaatttgt
tctaggccaatgtctcctcaacaaggtcctgttcttcatcactctccaagtgtgtctcct
aggcaacatacacctccacaacagcaacagcaatcaatgggacacacttcaaattttcct
agccctattcctggtactacaagccatgaggatgctcgcttacacgttttttatcacttg
tctaacctatttccagaagctcaagttagagctgtactggcagtgtatccagaagagacg
gacccccagaaaatatgtaattatatattagctcgcaaccctgggcctgttgggtcgcgc
ccaatgtctccccaacagctgccacagtcaggagtaggtcaccagtctcagggtgtccca
gttcgtggatcctctcccctctcagctggtttctcaagttcccttccaactgctgcatcc
agtcatgaggatgcacgtttacgtatattttatcatttatcgcaattgtttcctgtagct
caagtgcgtgctgttttagctaggtatcccgaggaaacggatgcaaagcagttatgtgcc
actcttctaagtcatctaagtggcaatcagtcctga
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