Cherax quadricarinatus (Australian red claw crayfish): 128703934
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Entry
128703934 CDS
T09502
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03013
Nucleocytoplasmic transport
cqd03015
mRNA surveillance pathway
cqd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128703934
09122 Translation
03013 Nucleocytoplasmic transport
128703934
03015 mRNA surveillance pathway
128703934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128703934
03041 Spliceosome [BR:
cqd03041
]
128703934
03009 Ribosome biogenesis [BR:
cqd03009
]
128703934
03012 Translation factors [BR:
cqd03012
]
128703934
Enzymes [BR:
cqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128703934
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128703934
mRNA cycle factors
Stress granule specific factors
128703934
Spliceosome [BR:
cqd03041
]
Complex C
Other components
EJC/TREX
128703934
Ribosome biogenesis [BR:
cqd03009
]
Eukaryotic type
90S particles
Helicases
128703934
Translation factors [BR:
cqd03012
]
Eukaryotic type
Initiation factors
eIF-4
128703934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
TniB
Utp25_C
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
128703934
NCBI-ProteinID:
XP_053654795
LinkDB
All DBs
Position
1:2369834..2403408
Genome browser
AA seq
402 aa
AA seq
DB search
MAETRVRRVIPEDLSNVEFETSEEVQVVPTFDSMGLREDLLRGIYAYGFEKPSAIQQRAI
RPIIKGRDVIAQAQSGTGKTATFSISILQSLDINVRETQVLTLSPTRELAVQIQKVVLAL
GDYMSVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRTLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacacgagtcagaagagttatacctgaagatctttctaatgttgagtttgag
acgagtgaggaggtgcaggttgtaccgaccttcgacagtatgggtctgagggaggacctt
ctcaggggcatatatgcttatggatttgagaagccatctgccatccaacagcgtgctatt
cgtcccattataaaaggccgtgacgtaatagctcaggctcagtctggtacaggaaaaaca
gcaacattctccatatccatccttcagagtttggatattaatgttcgtgagacccaagtc
cttactctgtcacccacaagggagttggctgttcagattcagaaagttgtgcttgctctt
ggagattacatgagtgtacagtgtcatgcatgcatcggaggaacaaaccttggagaagat
attcgcaagttggactatgggcagcacgttgtttctggtactccaggcagagtgtttgac
atgatcagacggcgtacactcagaacacggtctataaagatgttggttttagatgaagca
gatgagatgcttaataaagggtttaaggagcaaatatatgatgtataccgctaccttcct
cctgctactcaagtggtcctcatatctgcaacattaccacatgaaattttggaaatgaca
tcaaagttcatgacagaccccatccgcattctggtaaaacgtgatgaattgacactagaa
ggtattaagcagttctttgttgcagtcgaacgtgaggaatggaagtttgacacactgtgt
gacttgtatgacacactcaccatcacacaggctgttatcttctgtaacacaaagcgtaag
gtggactggctgacagagaaaatgagagaagcaaacttcacagtgtcatcaatgcatggt
gatatgccacagaaagagagggatgctattatgaaggaattccgttcaggccagtcgaga
gtcctcatcacaactgacatctgggcacgtggcattgatgtacagcaggtttccttagtg
attaactatgatctgccaaataaccgtgagttgtacatccatcgtattggtcggtctggg
agatttggccgtaaaggtgttgctatcaactttgtcaagaatgatgacattcgtatttta
cgcgacattgaacagtactattcaacacaaattgatgaaatgcccatgaatgttgctgat
ctgatttaa
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