Cherax quadricarinatus (Australian red claw crayfish): 128704039
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Entry
128704039 CDS
T09502
Symbol
Top3alpha
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03440
Homologous recombination
cqd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128704039 (Top3alpha)
03460 Fanconi anemia pathway
128704039 (Top3alpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cqd03032
]
128704039 (Top3alpha)
03400 DNA repair and recombination proteins [BR:
cqd03400
]
128704039 (Top3alpha)
Enzymes [BR:
cqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
128704039 (Top3alpha)
DNA replication proteins [BR:
cqd03032
]
Eukaryotic type
DNA Topoisomerases
128704039 (Top3alpha)
DNA repair and recombination proteins [BR:
cqd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
128704039 (Top3alpha)
FA (Fanconi anemia) pathway
128704039 (Top3alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
RGCC
Motif
Other DBs
NCBI-GeneID:
128704039
NCBI-ProteinID:
XP_053654964
LinkDB
All DBs
Position
66:23686328..23794954
Genome browser
AA seq
1170 aa
AA seq
DB search
MFVNSFFKVTLAFRAGLRRSFTTLSSHCLHLLPQSSIPGSVSKVWLFLHLHCDLTRWLHV
ATCYSYIEKDRIDSKMVRVLNVAEKNDAAKNLAEIMSRGGYSRRDGYSVYNKIYEFNLML
NGQQCHMVMTSVSGHLLSHEFTGNYRKWLGCNPLQLFDAPVVKGCIQNMDPIKRTLEKEA
RAASRLIIWTDCDREGENIGFEISEVCQAVKPSLVVQRAKFSEITFMSVQRALHNLATPD
KLQSDAVDVRSELDLRIGAAFTRFQTLRLQKVFPQALAETLISYGSCQFPTLGFVVERYK
AIQQFIPEQFWKIKVTHAGEEGVIEFSWRRVRLFDQAVCTVLFEMCEDNPQARVTKVITK
NKSKWRPLPLDTVELEKLASRRFHISAKETMKIAEKLYTQGYISYPRTETNIFPKELDLL
PLVEMQTQDQNWGGFAAGVLEDGPNPRKGKKSDQAHPPIHPTKYTSDLHGNDQKIYEFIV
RRFLACLSKDAKGLETIVDIEIAGEEFTTGGLIILERNYLDVYPYDRWSDKVMPQYEEGQ
VFDPTSLEIVDGETSPPPLLTEADLIALMEKHGIGTDATHADHIETIKSRMYVGLQDTRF
VPGQLGMGLVEGYDSMGFHMSKPNLRAELEADLKRICDGTKDPQLVLHEQIGKYRHVFEE
ALRQASKIDAALAQFLNEEPQHPSVDNPIPDIPQFTPVCKCSSCGCDVVVKQKRNSGYYL
SCQNFPQCRCVLWLPESIIGVTVCEQSCTRCNGSPKKLKLKFQPRSYLPFLPDEYETCLG
GCDQHILQTLDITAITFSGQGGEHPVAGRPSAVGGQLVARRPSAVGGQPVAGRPSAVGGQ
PVAGRPSAGGGQPVAGRPSASGGQSVARRPSASLSNSGYSSTNFSTINNSNQWRIGFGQQ
RGNSPNINSSRTANTLNNTSNSSNGGQGGAHSNSFIDSSGTSALDSGFTSFGVSQSLSHL
PWNGNKSEDQANAIVCNCNEDAIILTVRKEGPNKGRQFYKCPKMQGQGCNFFLWADCGGN
TGSRENNDRNNEGGGEGSGSNKGTGRGFNSNNAWDDGVIVCKCTIPAKRLTVQKEGPNKG
REFYVCSKDRSEQCHFFKWADELSQSERGDGGLNTWSNDLRFNPVSGHGYEGNTGGTKRK
AAEGNKPKKRKCGVCGEEGHNRTTCPQNAY
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaaattctttcttcaaggtcactcttgcattcagagctggtctgaggcggagc
ttcactaccttgtcttcccattgtcttcatctgctgcctcagtcgagcatcccaggcagt
gtgtcgaaggtttggttattcttgcacttgcactgtgacctaactaggtggctacatgtt
gccacatgctactcctacattgaaaaggatcgaattgacagtaagatggttcgtgttctt
aatgtggctgaaaagaatgatgcagcaaaaaatttggctgaaattatgtccagaggaggc
tacagtaggagagatggctatagtgtgtacaacaagatttatgagtttaacctgatgcta
aatggtcagcagtgccacatggtgatgacgtcagtgtctggccacttactcagccatgag
ttcacaggcaactaccgcaagtggttagggtgcaatccactccaactttttgatgctcca
gtagttaagggctgcatacagaacatggaccccataaaacgcacccttgagaaggaagct
cgagctgcatcacgtctcattatctggaccgattgtgatcgcgaaggagaaaatattggc
tttgaaataagtgaagtgtgtcaggcagttaagccatcactggtggtacagagagccaaa
ttttctgagattacattcatgtctgtgcagcgagcattgcataatcttgcaactccagac
aagctacagagtgatgctgttgatgtgcgatctgaactggatttgaggattggtgctgca
ttcaccaggtttcagacattacgattacagaaggtgtttccgcaggcattggctgagaca
ctcattagttatggctcgtgtcagttcccaactctgggttttgtggttgagcgatacaaa
gccattcagcagtttattcctgagcagttttggaaaattaaagtcacacatgctggagaa
gaaggtgttattgagttttcttggcggcgtgtacggctgtttgaccaagcagtgtgtaca
gtgttgtttgaaatgtgtgaagataatccacaagcacgagtcacaaaagtgatcactaag
aacaagagcaagtggcggcctctgcccctggatactgtggaacttgagaaattagcatca
cgcagattccacatcagtgctaaggaaactatgaaaattgcagaaaagctgtacacacag
ggttacataagttaccctcgaacggaaactaacatttttcccaaagagcttgatcttctt
ccgctggtggagatgcagactcaagatcaaaactggggaggctttgctgctggtgtgctg
gaggatggtcccaaccctcgcaagggaaagaagtcagatcaagcacatcctcccattcat
ccaaccaaatacaccagtgacctgcatggcaatgatcagaagatctatgagtttattgtg
aggcgcttcttggcgtgcctcagcaaagatgccaagggcctggaaactatcgttgatatt
gaaattgctggagaagaatttactacaggtggtctcatcatcctggaacgcaactactta
gatgtatatccttacgatcgttggagtgacaaggtgatgccacagtatgaggaaggccag
gtgtttgacccgacctcgctggaaattgtcgatggtgaaacttcacctcctcctcttctg
actgaagcagatcttattgctcttatggagaaacacggcattggaacggatgctactcat
gcagatcacatagagactattaagtcacgaatgtacgttgggctgcaagacacgagattt
gtgccaggccagcttggtatgggcttagtggaaggctatgattctatgggcttccatatg
tcaaagcccaatttgcgagcagaattagaagcagacctaaaaagaatatgtgatggaact
aaagatccacagttggttttgcacgagcaaattggaaaataccgccatgtcttcgaggaa
gctttacggcaggctagtaaaatagatgcagctctggctcagttccttaacgaggaacca
cagcatccatctgtggacaatcccatcccagacatcccacagtttactccggtgtgtaag
tgttcctcttgtggatgtgatgttgtggtgaagcaaaagcgtaacagtggctactacttg
tcatgccagaactttccacagtgtcgctgtgtgttgtggctgcctgagtctataattggt
gttaccgtgtgtgagcagtcatgcactcggtgtaatggttcacccaagaaacttaaactg
aagttccagcctcgatcttatttgccgtttcttcctgatgaatacgagacgtgtttaggg
ggttgtgaccagcacatccttcaaacacttgacatcacagccataacgttctcaggccaa
ggtggagaacatccagtggctgggagaccatcagcagttggagggcagctagtggctagg
agaccatcagcagttggagggcagccagtggctgggagaccatcagcagttggagggcag
ccagtggctgggagaccatcagcaggtggaggacagccagtggctgggagaccatcagca
agtggagggcagtcagtggctaggagaccttcagcttctttatcaaacagtggctactcc
tctacaaacttctccactattaataactccaatcagtggagaattggctttggtcagcaa
agaggcaacagtcccaatataaattcaagcagaactgcaaatactcttaacaatactagt
aacagtagtaatggaggccagggaggagcacactctaactcttttattgacagtagtggc
actagtgccttggactctggttttacatcttttggtgtttcacagtctctgtctcattta
ccatggaatggtaataagagtgaagatcaggcaaatgccattgtttgcaactgtaatgag
gatgctatcatcctcactgttcggaaggagggtcctaataagggtcgacagttttacaaa
tgtcccaagatgcagggtcagggatgtaacttcttcctttgggctgattgtggaggcaac
actggaagcagagagaacaacgacagaaataacgaaggaggtggagaaggaagtggtagc
aacaaaggcacaggcagaggttttaatagcaacaatgcatgggatgatggtgttattgtt
tgtaagtgtaccatcccagccaagagattaacagtgcagaaggaaggtcccaacaagggc
cgggagttctatgtgtgcagcaaggatcgcagtgagcagtgccacttctttaagtgggca
gatgagttatctcagagtgaaagaggtgatggtggactcaacacttggagtaatgattta
cgtttcaatcctgtgagtggacatggctatgaaggaaatactggaggaactaaacgcaag
gctgcagaaggcaacaaaccaaagaaaaggaagtgtggagtgtgtggggaagaaggacac
aatcgtacaacttgccctcagaatgcatattaa
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integrated database retrieval system
