Cherax quadricarinatus (Australian red claw crayfish): 128704336
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Entry
128704336 CDS
T09502
Name
(RefSeq) nuclear exosome regulator NRDE2-like isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128704336
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128704336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
Motif
Other DBs
NCBI-GeneID:
128704336
NCBI-ProteinID:
XP_053655478
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All DBs
Position
84:12476732..12506531
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AA seq
1465 aa
AA seq
DB search
MSLFPAYSVHHNCGGQSEASSASLAWLTNESCPPEAGQPLVAHVSHGAVSEDGEISRESG
EATKSPQVDKERSPSPKKKKKRKRRKKSKSQKNDSSLDESSTEEVNRKRKKHKDKKPQYP
NPDKYSSRSRSRSLTPPRSTDKRARLGSHSRSGSRSRNVESRKQLKYRNRSRSRTRRSHS
RCISSKSGSRNKSRSLSRGRKSKSASRSRKSRSWSRGRRSRSWSRSRRTRSRSRRTRSGS
RRSRSRSRRTQSRSRRTRSRSRRTRSRSRRTRSRSRRSRSWSRNRGSRFRRSRSGSRLGS
TSRSRIKWSPRPRFRRSRSGSRKRRGIRQQASRFKRSRSRSYSPPGTRRRWRSKSRSRSR
ERVRHKNKDKKNKNDSVNYFESDKIVMGSKSVFLEDLHGLVKPERAFFLSADGDRNNIAF
PTTHHTQLASYKTKVKGLLGSSVTKDKLKSNKKTLRYFKRVALKMMYSDATKVRTLPIEN
SEGKENHNGYIPVELTYAEEARAKNTTQHSEVNPLGIHDSTTQQYLMGLGNVRQEESQQS
SQKIEYEYWQNHSKKYNERLGKEPGNVPLWLEFVRFQDEAYLYLFQGTDSNNKDSKKKHK
RNRKALAERKISILDSAIKKNFRSLELQFERLEIGKDIWDDKKLKQEWGTLIFNFPNKIK
VWHQYLIFMKTHFTSFNLSVVVQTFAKCTERLQQMHSGVFLTHSPPPDLGRCLVDIAVQL
AQIWRQGGHMERSIALFQALVELNFFSPKHLCTKDTPVEARLALFEAFWDSRAPRFGEEN
AIGWAQVMERKQKVEFPEVILSGTQDEEDDIISQGGTTSRLWLALETSRERHHWLPWAQD
PEDCEDPDRMVPFEELSPHLFILDSVDERFYLVLQFLNFFGVPDTKTFTVSIPTVNKGQK
KCNTTEISTNNDNAFEPQIIETLSDIDLFGSHFQLGKTHKISEILNFDTVGPSLLEDSCE
EYYQFLCRLLQQASNIFDQSYRNRITVLYIKLLSKRYLIKKKNNTDKARLKSFGKELKKH
IKNILKSEEFRMYLPVYLEYGKIEEAMGHFDEAENVYATALSVGTASGNALDITNVDFPA
VMDLYKSYVHLEMDREGKLCDCKHSNNVMYSLCSLVIDGKFDAADGSHAPGGNVLKAKKK
LNELLEFYSDSIAFNCDSHVPKDNEKLLTGKLVVFIAILQLLTVGFKPACIVFETIIDKI
KGICKDPIPHKLEDIALPSESAITTPIMEEKRKNKGDKLKILESLYEDYLWLIEVSSQLG
HLVRDGTMSPVSLRAILTSAVQVAPENQRFLLVLAQNQGWRDLLGGLEIHSQRSSSIVVL
VSQILPHVQRTVTLINNTDEGLLSCGHRLENVLRKGVSRPPGNHCPLLWRLYLALVATTQ
PKKLRELIYRALSHCPGVKSVYLDCVRLMPGMLKEIVNLLSEKGMRVRMPLEELQVLTET
ELELVNKNEDNVVDSDEEEDQETKD
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcttcccagcttactctgtccaccacaattgtggaggccagtctgaagcttcg
tcagcatccttggcttggttgaccaatgaaagttgtcctccagaagctggtcagccacta
gtggcacatgtatcccacggcgctgtatcagaagatggggaaatatctcgtgagagtggt
gaagcgacgaagtctccacaggtggataaagaaagatcaccctcacccaaaaagaagaaa
aagaggaagagaaggaagaaaagcaaatctcagaaaaatgattcgtctttagatgaatca
agcactgaggaggtaaacaggaagagaaaaaagcacaaagacaagaagcctcagtaccct
aatcctgataaatattcgtccaggtcacgttcaagatccctaactcctccaagaagtaca
gataaaagagctaggttggggtcgcattccagatcaggatccaggtcaagaaatgttgag
tcaagaaaacaactgaagtatcgaaacagatccaggtcacgaaccagaagatctcactca
agatgtatatcatccaaatcaggatcgagaaacaagtccaggtcattgtctagaggtagg
aaatccaagtcagcgtcgagatctagaaaatccaggtcatggtcgagaggtagaaggtcc
aggtcatggtcaagaagcagaaggacccggtcaagaagcagaaggacccggtcaggaagc
agaagatcccggtcaagaagcagaaggactcagtcaagaagcagaaggactcggtcaaga
agcagaaggactcggtcaagaagcagaaggactcggtcaagaagtaggaggtccagatct
tggtcaagaaatagaggatcgagattcagaagatctagatcaggttccaggttaggatca
acatcaagatcaagaattaaatggagtccaaggccgagattcagaagatccaggtcaggc
tcaagaaaaagacggggtataaggcagcaggcgtcacgttttaagagaagtagatcaaga
tcgtattcaccgcctggaacaaggaggcgctggaggtccaagtcacgctcacggtcaagg
gaacgtgttagacacaagaataaggataagaaaaacaagaatgacagtgtgaactatttt
gaatcagataagatagtcatgggcagcaagagcgtcttcttggaggaccttcatggtttg
gtcaaacctgagagggcctttttcctcagtgcagatggggacagaaacaatatcgcattt
cccaccacacatcacactcagttagcaagttacaagacgaaagtcaagggacttcttgga
agcagtgtcacgaaagataaacttaagtctaataagaagactctgagatatttcaagaga
gttgctctgaagatgatgtactccgatgctacgaaggttagaacattgcctattgagaat
agtgaaggcaaggaaaaccacaatggctatattccagttgagctgacatatgccgaggaa
gccagagcaaagaataccacccagcattcagaagtgaaccccctgggaatacacgatagt
acaacacaacaatatttgatgggcttaggaaatgtcaggcaagaggaaagccaacagagt
agccaaaaaattgaatatgaatactggcaaaatcattcaaagaagtacaacgagagactt
ggaaaagagccaggcaatgtaccgttgtggctggaatttgttagatttcaagatgaagcc
tatttgtatctttttcagggtacagactccaataacaaggatagtaaaaagaagcataag
agaaatcggaaagctttagcagagaggaaaatttccatattagacagtgccatcaagaaa
aactttaggtctctagagttgcagtttgagcgtctggaaattggcaaggatatttgggat
gacaaaaaactcaagcaggaatggggcacactaatattcaactttccaaataaaataaaa
gtatggcaccaatatctgatatttatgaagacccatttcacctcatttaatttgtcagtg
gtggtgcaaacctttgccaaatgcactgagagactgcaacaaatgcacagtggggtgttc
ttgactcattctccacctccagatcttggaagatgcctagtggatatagctgtccagctt
gctcaaatatggagacaaggaggccacatggagagatcaattgccctgttccaggcactt
gtcgagctcaattttttcagtccaaaacatttgtgtaccaaggatacgccagtggaagca
agacttgctctctttgaagctttctgggattcacgagcaccaagatttggtgaagagaat
gcaattggatgggcccaagtcatggagagaaagcagaaggtggagttcccagaggttata
ttaagtggaacacaagacgaagaagatgacatcatatcccagggaggcacaacttcacgt
ctgtggctagcgcttgagacctcacgtgagagacatcactggctgccttgggcacaagat
cccgaagactgtgaagacccagacagaatggttccctttgaagaactctccccccacctt
ttcattttggattctgtcgatgagcgtttttatctcgtcctccagtttcttaactttttc
ggtgtgcctgatactaaaactttcacagtgtccataccaaccgttaacaaaggacaaaag
aaatgcaacacaactgaaataagtacaaataacgataatgcttttgagcctcaaataatt
gaaacactgtctgatatagatttatttgggtcccattttcagttaggaaaaacacataaa
attagtgaaattctgaattttgatactgttggtccatctctcctagaagactcgtgtgag
gagtattaccagttcttgtgccggctgcttcaacaggcatctaatatatttgatcagtcc
tatagaaatagaataacagttctgtacatcaagctgttgagtaaacggtatctaatcaag
aagaaaaacaacactgataaggccaggcttaaaagctttgggaaagaattaaagaagcat
atcaaaaatatattgaaatcagaggaatttagaatgtacctaccagtgtacctggaatat
ggtaaaatagaggaagctatgggtcattttgacgaggctgagaatgtgtatgcaacagcg
ttgtccgttggaacagccagtggaaatgctctcgacattacaaacgtagactttcctgct
gttatggacctctataagtcatatgtccatcttgaaatggatagagagggaaaactgtgc
gattgtaagcacagtaataatgtcatgtactcgctttgttcactggtgattgatggaaaa
tttgatgcagccgatgggtctcatgcaccaggtgggaacgtcctcaaagctaagaaaaag
ctgaacgaacttctggaattctatagtgattccattgcatttaattgtgacagtcatgtt
ccaaaggacaatgaaaaattactaacaggtaaattagtggtctttattgctattttacag
ttgctaactgttggttttaaacctgcttgtatagtttttgaaaccatcatagacaaaatt
aaaggaatatgtaaagatccaattcctcacaagctagaggatattgcattgccttcagaa
agtgctattactactccaataatggaggagaaaaggaaaaacaaaggtgataagttaaaa
atattggaaagcctctatgaagactacctgtggctcatagaagtgtcgtctcagcttggc
catctggtcagggacggcacaatgtcaccagtgtcactgagggcgattctcacatcagct
gtgcaagttgctccagaaaaccaaagatttctcctggtacttgctcagaaccagggttgg
cgtgatcttctgggaggcttggagatccactcacagagaagttcttccatcgtggtgttg
gtgtcgcagatcttgcctcacgtccagagaactgtcactctcattaataacacagatgaa
gggttgctcagttgtggtcaccggttagagaacgtgttacgaaaaggagtaagtcgacct
ccgggcaaccactgtcctcttctatggagattatatttggctctagttgctactacacaa
cctaagaaattaagggaattaatttacagggcactctctcattgccctggtgtcaagagt
gtgtacctggactgtgtgcgtctcatgccagggatgctgaaggagatagtaaatcttcta
agtgagaagggaatgagggtgagaatgcccttagaagagttgcaagttctcactgaaaca
gaattggagttagttaacaagaatgaagataatgttgtagacagtgacgaggaagaagac
caggaaaccaaagattag
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