Cherax quadricarinatus (Australian red claw crayfish): 128704556
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Entry
128704556 CDS
T09502
Symbol
skd
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cqd03021
]
128704556 (skd)
Transcription machinery [BR:
cqd03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
128704556 (skd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
128704556
NCBI-ProteinID:
XP_069935790
LinkDB
All DBs
Position
Unknown
AA seq
2188 aa
AA seq
DB search
MMSTHSQTNGASLEDCHTNFFALTDLCGIKWRVYVWDNPGGSGGGGGVGGGGGGGGGVPA
DPLEDPVLVSYSRMVAADVLCVWRRTWRPPHDHVPPSPQQSNYHHHHHHHQHHQQHHQQQ
RHSLKHSPKELWVFWYGDEPDLSNLLAPELLKSEDNCGSWDWETGLSYECRTLLFKALHN
LIERCLLTRDFVRLGRWFVQPYEGPEGIPGSSSTHLSFSLSFFVHGESIVCASVDVRQHP
PVRQLTRRHLLLAQQTNHGIPVILGPYGLSGTLTGVSYRHSEPQIQKLLEDWRQFFPVET
KVPPTDSLEPALPAAVEVIVGGHKMRYPTCYVLVTDMDDYLMAGRGASILNMGQMAPGGL
KGGLANESTSEGSDGSNLPTHNSPFTASTHTLLASEYLNSGGRGLGWSRGMCERVWQDIV
QCPGQQPPVQHDCLTPEGTLTPAEIAGQWDFSDPATKISCSCAKCRRGRVSSKGCSSSKG
RGEKSSGGGGRQRGGSSVTGCTPFHKRPPPAPLPSHDEAVLDQCGVAAIEESELIQAAAR
LSGAGTPSGGNGSGGFSGYKSGGVATPGSVPSLRLTGVADGPPPSVDSPASITPSPLPTP
HSQPPSVPHHEPTMPTLSPHPPPSNTSVGDPSTPAPLDSIDVKPNISDIMGPKSVSSPNN
QGMSPYGGGDRGNGMESNDTSSSLGGLGSSNGSIRGLKRPSLPGTDYHSLLELEKPSPVL
YDYTKLNAWLHHPVKKFKPSEPKVEEPLWPPYRPAHIQEHMDPYRPEMGQEIPEMNGLPA
KYPGGIKREADPCDSDDDLGSVTTQEVIKRKDGLDKDEAKTPGSVRSSHDPHSPSQPKKT
GNLYTIEGLQPSLSDLDEIFDSDSPVDDATFPDHTPPGSNKPSGGPEDTAAVINNKNSGG
GNNKTSVNASLVELTKMFPTPPSHEHNPDHDTALDDTVSQVISIKQERIEEPRIINTLEP
CAIPIKEEPAQMLAVYRPPSLSMFVGSIKYAPLLNLPSQEHKTIVTIPEEWVYKPSWQFP
VSDKSHGSAPPMVHMGPLHGGPPTGSHGQKVGLSPISPMTSSIGGPASDGGPGSQRGPGS
VGPASAGPPMNYELPSPASNQSSYLNKTLPSVEPPTMGLNQVPEANSLIVNVALQDSSVN
LFRDHNFDSCTMCVCNNSQKNVGNIRGNDGTLYLPPTHLSVEEESIKCNCGFSAIVNRRL
AFQAGLFYEDEVDLTGLHEALATERKKQSLLLLMDNKGVDNADRETSILDQIPQSMFRLL
QSQCLVTLSAPSSVIYRSTTVYQNTRRDILLNLVDYKDGNEIACMAVEQSRGANLSDSES
GSPGIRLQCMHKWCYYQFDGPRCSKDIVRCMKALQPHLQEAIQKKGRRVNWEPVFSVDGP
LTWRQFHRMAVRGTEDMAEPLPIPMLLTGHDRDWLSIAPQSLRHWEKLLLEPYSQQRNVA
YVVVAPDNEFILNHVRTFFKELSSIYELCRLGRHSPIQRVLRNGIMRISKTAASKVANEP
LEEWFSLLGDSHMSTKLKVYAQVCRHWLAPHLSTLNMDKSLFEVPGSSKASERQAPSPMP
PPSSETVCNTNTSTTPTANSEPEATYSSNPTVSNSQGTVILGTGASLNEVDEDDSPPPAI
LVYLVDPFNVGQDHPDMHRLVTLGLLRCYEHMLEGLPESMQNNVYLQIISLESILELASD
SHDRSRYIDQLKSLAFSVFMQCRRTLSHNAVVKSLTGFGPASVYDGFLKPKEASIAAEEK
RLAPYHIFSPAYILAPIKESRGTYKEAQEALGVPREKSTILNCTYCLSEDQRWLLATATD
ELGEILETVTISIEIPNRTRRKKASARRHGLKKLMDWILSVMSIGVHPWRLVVGRLGRMG
HGELKGWSSLLSRKSLTQASKNLKEMCKQCAYLFPGDAPCILSACLVSMEPDSSFRIMPD
MFTPDERFGQNSQNCSLSTPQDLTCTHILVFPTSATAQSAQQRFQDEQAVHFENVDLLLD
EDLRDDMGGGMGDIGIGMGLSLNEILMLDNCPNQDDQMDDGSGQRDSLSQPGSPTMGGGG
GTSPSQFSGQARSNGVVLVDPQEDSSGSVLQQPLALGYYVSTASTGRLPRWFWSSCPHLE
SSCPVFLKSALHLHSPGITQSEEFLHSTNNKVHPLDSSYTTDVLRYVLEGYNGLSWLVLD
PAKQDRRSCLPLHMQVLSHLYNVMAALV
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctacgcactcacagacaaacggggcaagcttagaagattgccacactaatttc
ttcgccttgactgacttgtgcgggataaaatggcgggtatatgtatgggacaaccctggc
ggaagtggcggcggtggcggcgtcggcgggggcggcggcggcggcgggggggtgccagct
gaccctctggaagaccccgtgctggtgtcgtactcccgcatggtggccgctgacgtgctg
tgcgtgtggcgacgtacgtggcgtccgccgcacgaccatgtacctccctccccccagcag
tccaactaccaccatcaccaccaccaccaccagcaccaccagcagcaccaccagcagcag
cgccactcactcaagcactcacctaaggaactctgggtgttttggtacggtgatgagcca
gacctctccaacctgctggcaccggagctgctcaagagtgaggataactgtggctcttgg
gactgggagactggcctttcctacgagtgccgtacacttctgtttaaggcgctacacaac
ctcattgaacgatgtcttctaacacgggattttgtgaggctgggtcgctggtttgtgcaa
ccttacgagggtccagagggtatcccgggtagtagtagtacccacttgtccttcagttta
tcattctttgtccatggtgagagcatcgtctgtgcgagtgtagatgtacggcagcatcca
ccagtaagacagctgacccgtcgacatctactgttggcgcaacaaaccaaccatggcata
ccagtgatcttgggcccatatggactgagtggtacacttactggtgtaagttatcgccat
tctgaacctcaaatacaaaaactcttggaagattggagacagttttttcctgtagaaacc
aaagttccacccacagactccctggagcctgctctccccgcagctgtcgaagttattgtg
ggaggccacaagatgcgctacccaacgtgttatgtgttagtgacggatatggacgattac
ctgatggctgggcgaggtgcaagtattttaaatatgggacaaatggctcctgggggcctt
aagggagggctggcaaacgagagtacttcagagggtagcgacgggtcaaaccttcccaca
cacaattctcccttcacagcttctacgcatactcttttagcctcggagtatctaaactct
gggggacgaggcttgggctggtctcggggaatgtgcgaacgtgtctggcaagatatagta
caatgtcctggacagcagcccccagtgcagcatgattgcctcactccagaaggaacgtta
acccctgcagaaattgctggccaatgggacttctctgacccagccacgaagatcagctgt
tcgtgtgccaagtgcagaaggggtcgggtcagtagtaaagggtgtagcagcagtaagggc
cggggagagaaaagtagtgggggaggcgggcgtcaacgggggggcagctcggtgactggc
tgcacccccttccacaagcggccccctccggctcccctaccctcgcatgatgaggcggtc
ctggaccagtgtggcgtggcagccatcgaagaatctgaactaatccaggctgctgccaga
ttgagtggggccggaactcctagcggtggcaacggaagtggaggttttagcggctacaag
agtggaggtgtggccactccgggcagcgtacccagcttacgattaacaggagttgctgac
ggtccacctccatcagtcgactcccctgcctctataacaccgtcaccgcttccgacgccc
cactctcaacctccgtctgtgcctcatcatgagcctaccatgccaactttaagtcctcat
ccaccaccttctaatacatcagttggcgacccttccacccctgcacctcttgactcaata
gatgtaaagcccaacatctctgacataatgggtcctaagtccgtatcatcgcctaacaac
cagggtatgtctccgtatggtggaggcgatagagggaatggcatggaatcaaatgacacc
agcagtagtttgggcggacttggaagcagcaatggttctatacgaggattgaagcgacca
tctcttcctggcaccgactaccattccctcttggaattagagaaacccagccccgtcctc
tatgactacaccaaattaaatgcgtggcttcatcatcctgtaaagaagtttaaaccgtca
gagcctaaagtagaagaacctctttggccgccctacagaccagctcacatccaggaacac
atggacccttatagaccagagatgggtcaggagattccggaaatgaatggtttaccagct
aaatatcccggtggtatcaagagagaagccgacccctgtgactccgacgatgaccttgga
tctgttactactcaggaggtaatcaaacggaaagacggccttgataaagacgaggccaaa
actccgggcagtgttcggtcatcgcatgacccacattctccttctcaaccaaagaaaact
ggaaatttatacacaatagaaggactccagccttctttatcagatttagatgaaatcttc
gattcagattctcctgtggatgatgccacattcccagaccacacacctccaggatctaat
aaaccatcgggaggacctgaagacactgctgcagtcattaataataaaaatagtggaggc
ggaaataacaaaaccagtgtgaatgcaagtctagtggagttaaccaaaatgttcccaaca
cccccatcccatgaacacaatcctgaccatgacactgctttagatgatacagtatctcag
gtcatcagtattaagcaggagcgtattgaagaacctaggatcataaatacactagaaccc
tgtgctattcccataaaagaagaaccagcacagatgctagctgtctaccgaccgccctct
ctgtctatgtttgttgggtcaataaagtatgctcctcttctaaaccttcccagtcaggaa
cataaaacaatcgtcactattccagaggaatgggtatacaaaccttcttggcaatttcca
gtttctgataagtcacatggatcagctcctcccatggtccatatggggcccctgcatggg
ggcccaccaactggtagtcatggtcaaaaggtgggattgtctcccatatcacccatgacc
tctagtattggaggccctgcatcagacggtggtcctgggtctcaacgtgggcctggtagt
gttgggcctgcatcagcaggtccaccaatgaactacgagctaccatcaccagcgtccaat
cagtcatcttacctcaacaagacactgccgtcggtagagcctcctactatggggcttaac
caagtacctgaagccaattccctcattgttaatgttgcactgcaagactctagtgtgaac
ctatttagagatcacaattttgactcttgcacaatgtgtgtgtgtaacaatagccagaaa
aatgtaggtaatattcgtggtaatgatggaactctttatttgccccctacacatctaagt
gtggaagaagaaagtattaagtgcaactgtggtttttctgcgatagttaatagaaggtta
gcctttcaggctggtttgttttacgaggatgaagtggaccttactggcctccatgaggct
ctagcaactgaacgcaaaaaacagtccttgcttttgctaatggataataagggtgtagat
aatgctgaccgtgaaaccagtattttagatcagatacctcaatctatgtttcgtcttttg
caaagccagtgcttagtaacgttaagtgcgccatctagtgttatatatagatcaacgact
gtgtaccaaaatactagacgagacattttgttaaatttagtggattataaggatggaaat
gaaattgcatgtatggcagttgaacagtctagaggagcaaatcttagtgatagtgaaagt
ggctccccaggaatcagacttcagtgcatgcacaaatggtgctattaccaattcgatggt
cccagatgttctaaagatattgtgaggtgtatgaaggcccttcagccacacttacaagaa
gctatacaaaagaaagggcggagagtcaattgggagccagtgtttagtgttgatggtcct
ctgacgtggagacagttccatcgtatggctgtgagaggcacagaggatatggcagaacca
ttaccaatacctatgctattaactggtcatgatagagactggttatctatagcaccacag
tcactaagacactgggaaaagctacttctggagccatactctcaacagcgcaatgttgcc
tatgttgtggttgctccagacaacgagtttattcttaatcatgtacgcaccttcttcaaa
gaattatcttctatatatgagttatgcagattaggtcgtcattcacccatccagcgagtt
ttgagaaatggcattatgcggataagtaaaactgcagcgtctaaagttgcaaacgaacct
ttggaggaatggttttccctcctgggtgattctcacatgtctactaagctcaaagtttat
gctcaggtgtgtcgacactggttagcaccgcacctatcaacactgaacatggataagagt
ctcttcgaggtgcctggatcaagcaaagctagtgaaagacaagcaccttctcctatgcct
ccaccatcttcagaaactgtttgcaatacaaacacttctacaacacccacagcaaattct
gaacctgaagccacttattcttcaaatccaaccgtctccaattcgcaaggaactgtcata
cttggaactggtgctagtctgaatgaagttgatgaggatgactctcctccacctgctatc
cttgtctacctagttgaccccttcaatgtaggccaggatcacccagatatgcaccgtctt
gttactctaggcctactcagatgttacgaacacatgttggaaggccttcctgagagtatg
cagaataatgtttatctccagatcatctcattggaaagcatcctagagctggccagtgat
tcccacgatcgatctcgatacatcgaccaacttaagtcattagcattttcagtgtttatg
cagtgcagaagaactctctcccacaatgctgtagtaaagtcgcttaccggcttcggacca
gcgtctgtttatgacgggtttctgaaacccaaagaagctagtattgcagcagaagagaag
cggctagcgccatatcatatcttttctccggcatatatcctggcacctataaaggagagc
cgtggcacctacaaagaggcacaagaggctttaggagtgccaagggagaaatccactata
ctaaattgcacttattgtttgtctgaagatcaaagatggctactggcaactgccacagat
gaattgggagaaattttagagactgtaaccatcagtatagaaattccaaacagaacgaga
agaaagaaagcttctgcacgtcgacatggtctgaaaaagttaatggattggatactaagt
gttatgtctattggtgttcatccttggcgtttggttgtgggcagattaggaagaatggga
cacggagaattgaaaggatggtcgtctttgctttctcgaaagtctctgacacaagcatct
aaaaatctaaaggagatgtgcaagcagtgtgcttacctctttcctggagatgcaccgtgt
atactctctgcttgcttagtttctatggagcccgattcttcatttcgaattatgccagat
atgtttacacccgatgaaagatttggccagaatagtcaaaattgcagtctgtctacgcca
caggacctcacctgtactcacatactggtcttcccaacatctgctacagcacagtcagca
cagcagagattccaagatgagcaagctgtacattttgaaaatgtcgacttgttattggat
gaagatttgcgagatgatatgggtggcggcatgggtgatattggtattggaatgggatta
agcttaaatgaaattctcatgcttgataactgtccaaatcaagatgatcagatggatgat
ggtagtggccagcgagactcgctctctcaacccggtagtccaactatgggaggagggggt
ggaacaagtccctcgcaattttccggacaggctcgtagcaatggagtggttttggttgat
ccgcaagaagactctagtggttctgtcttgcaacaacctcttgctcttggatattatgtg
tcgacggcctccaccgggcgactcccgagatggttctggtcgtcctgcccacaccttgaa
tcatcttgcccagtatttctaaagtcagccctccacctccattctccaggcattactcag
tctgaggaatttttgcatagcacaaataacaaagtccaccctttggattcttcatatacc
actgatgttctcagatatgttcttgaaggctacaatgggctttcgtggctagtcctagat
cctgctaaacaggacagaagatcgtgcctgccactacacatgcaagtcctgtcccatctc
tacaatgttatggcagcccttgtttga
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integrated database retrieval system
