Cherax quadricarinatus (Australian red claw crayfish): 128706475
Help
Entry
128706475 CDS
T09502
Name
(RefSeq) patched domain-containing protein 3-like
KO
K12385
Niemann-Pick C1 protein
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Pathway
cqd03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cqd04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
128706475
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128706475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cqd02000
]
128706475
Transporters [BR:
cqd02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
128706475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
ACR_tran
MMPL
Motif
Other DBs
NCBI-GeneID:
128706475
NCBI-ProteinID:
XP_069951253
LinkDB
All DBs
Position
4:20213478..20279175
Genome browser
AA seq
1015 aa
AA seq
DB search
MTSMVTTVRSGTSSSPSGAVNGRQHPARDFLARVSNAIIDVLEHAFFSYGKTIAQTPYLF
LLFCLVITAFCCIGITKFNQETRPFKLWTPENSDFIKVMEWQEENFPSDLRINMAIYESE
NVLDKHVLLEMLKIHEVVVDTKTTSATWESVCAQVPTLSTASFGRWRRDITEETVPNQYS
KVTTELPTTVRMKSLRQAVDNENNDGGIDWSLVLPRNSYCEFIESMKEACLESSILEVFG
YDHDYISSLSQQQIIKQINTVDTSAVTGFPINITTFLGKVETDTEGQIVKAGSSRQTWFT
KINRTAIGRGNYINDVGTGSQVDAVTYEWEQKFINNVLNDTERPPNVSLYLMASSSFGTV
SGENVLNDLQYLSLGFGIVFVYVVIMLGKFNMVEQRPVLSIIGLSCVGLAVGVSYGLCSA
INIPYGPVNSILPFLLLGLGIDDMFVIMQAWNNLSPQEMKQELNERVGYALKHAGVSITV
TSVTDFAAFAIGSTTMLPALRSFCLYAAVGIASVYFFQATFFVAFLSIDQRRLEDTRHGL
LWCWKLNNWTPNRCSQIDLCQTFFTHVYANLLFLLPVKIFVLAATAVLACVSAWGLSNLR
QEFDPIWFLPQDSYLYKYFIKQNHYYPSSGEQGSVYFGDMNLFLELFNIDLLTTRLKESE
TIVEVDSWYDKYKWYWKKQGYTVPDPQQSEEEFLDQLSQFLFSPNGSPYRSRNFRFSSNL
NCTQMAPTVTISSINYRHTLMSTSKEEIKAMESIKSIVREINFTGYVYAWSRSYGEWETN
QVIEEELYRNMGLALAVVFIMTLLLIASLVTSIMVLVCVLLTLVDVGALMHWWGLTIDTV
SCIDLVLAIGLCVDYAAHVGHTFMTIAGTRDERAKNTVATIGPAVLNGGFSTFLSIVFLA
NSGSHVFLSFFKIFFGVCIYGLYHGLVFLPVLLSVVGPAPYVTVTPSSQEQNVANTEQME
QTSQAFIKKIIHSRDDSDNRRQDVDVNETGVYIVENKADEGQEADPSTATHTPKL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcatggttacaacggtgcgctcggggacctcatcgtccccatctggggctgtt
aatgggcggcagcacccagccagggactttctggccagggtcagtaatgccattatcgat
gtgctcgaacatgctttcttcagttacggtaagactatcgctcagaccccctaccttttc
ctgctcttctgtctcgtcattaccgccttctgctgcataggtataactaaatttaatcaa
gagacgcgtccctttaaactgtggacaccagaaaactcagatttcattaaggtcatggag
tggcaggaagaaaactttccatcggacttaagaatcaatatggctatctatgaatctgag
aacgtactggataaacacgttcttctggagatgttgaaaatccatgaggtcgttgtggac
accaaaaccacatcagcaacttgggagagtgtgtgcgctcaggtgcccaccttgtctaca
gcttcgtttggcaggtggaggagagacatcacggaggaaacagtacccaaccaatacagt
aaggtgaccactgaacttcctaccacagttcgaatgaaaagtttaagacaggctgttgat
aacgaaaacaatgatggtggtattgactggagtttggtgctacctagaaatagctattgt
gaatttattgagtcaatgaaagaagcatgtttggaaagcagcattctagaggtgtttggc
tatgatcatgactatatcagctctctaagccagcaacaaatcattaaacaaatcaacacc
gtcgacacaagcgccgtcactggctttccaataaatattacaacattccttggcaaggta
gaaacggacactgaaggccaaattgttaaagctggatcctccagacaaacttggttcacc
aagatcaatcgtacggcaattggaagaggaaactacataaacgatgttggaaccggatca
caagtggatgctgttacttatgaatgggaacagaaatttatcaataatgttctaaatgat
acggaacgcccgccgaatgtctcgctctacctcatggcatcgtccagttttggtacggtt
agcggcgaaaatgtcctaaatgatctacagtatctaagtcttggatttggtattgtgttt
gtttatgtagtaattatgcttgggaaatttaatatggtggagcagagaccggtgctctcc
ataataggactttcttgcgtgggactagctgtgggcgtctcatatggcctatgttcagct
attaacattccttatggacccgtgaacagcattctaccattcctgctgctaggacttggc
attgatgacatgttcgttatcatgcaggcatggaacaacttatctccgcaggagatgaaa
caggagctgaatgagcgtgttggttatgctcttaaacacgctggagtttccatcactgtc
acctctgtcacagactttgccgcatttgctattggcagtacaactatgttgccagcactc
agatccttctgtctctatgccgctgttggtattgcgtctgtttactttttccaggccacc
ttttttgtggcatttctctctatagaccagagacgcctcgaggatactcgccatggactt
ctgtggtgctggaaactcaataactggactcccaaccgctgcagccagatagacttgtgc
caaactttctttacacatgtatatgccaacctgcttttcctgctgccagtaaagatcttt
gtgcttgcggctacagctgttctagcttgtgtgtcagcctggggactatccaatctgcgg
caggaatttgatcctatctggtttctaccacaagattcctacctttacaaatacttcatt
aagcaaaatcattattacccatcttcgggagaacagggttctgtgtattttggggatatg
aatttatttttagagctgttcaatatcgatttactgacaacacggttaaaggaaagcgaa
actatagtggaggttgacagctggtatgataaatacaaatggtactggaaaaagcaaggc
tacacagtccctgacccccaacagtctgaggaagagtttctagatcagctgagccaattc
cttttttcccctaatgggtcaccatacagaagtcggaacttccgtttctcatctaacctt
aactgcacccaaatggcccctacagtaacaatttccagtattaactacaggcatacactg
atgtcaacatcaaaagaggaaataaaggctatggaaagcatcaaatcaatcgtcagggag
atcaatttcaccggatatgtgtatgcttggtcaagatcctacggagaatgggaaacaaac
caggtaatcgaagaggaattatatcggaacatgggtctagctctagctgtggtgttcata
atgacgctgctgctcatagccagcctggtcaccagcataatggttctggtgtgtgtactg
ttgaccctggttgacgtgggcgccctcatgcactggtggggactcaccatcgacactgtc
tcctgtatagacctggttttggccattgggctgtgtgttgactatgctgcccatgttggt
cacacattcatgaccatagctggcactagagatgagcgggccaagaacacggtggccacc
atcggaccagctgttctcaacggcggctttagcacctttctttctatcgtcttcctggcc
aactccggctcacatgtcttcttatcattttttaagatattttttggtgtgtgcatatat
ggcctgtaccatggtttggtgttcctgccagtgttactgtctgtggtgggtcctgcaccc
tatgtcactgtcacaccatcgtcccaagagcaaaatgttgccaacactgagcaaatggaa
caaacgagtcaggcattcataaagaaaatcattcatagcagagatgattcagataataga
cggcaagatgtggatgtgaatgaaactggtgtgtacattgtggaaaataaagctgacgag
ggccaggaggcagatccaagcactgctacacacactcccaaactctaa
DBGET
integrated database retrieval system
